G89583


Basic Information

Item Value
gene id G89583
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 38154835 ~ 38155132 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU111753
TACCACGTGGGCAGTTCTAGAGTGTCCTCTAGAGCACAAACAGTGTATCGTGCCTACAAAAGTTTTCTTGTTTCAAAACTTTGGAATCTGGATTTCTGGACAAAGCTATCCAATAACTATTACAGAAATAAGTTATTTTCAGTCTAAGTTTCCTCACACGGGGCACCAattatgtagcgtaaggtacacttataaatttcaatttaagaagtgaatttatagtatcaccttatcacgaatcctggaatcttgtagaactcaatttctgtaataattggacacagacaccaattccaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111753 True 298 lncRNA 0.36 1 38154835 38155132

Neighbor

gene id symbol gene type direction distance location
AMCG00021910 NA coding upstream 12676 38137122 ~ 38142159 (+)
AMCG00021911 NA coding upstream 33263 38120324 ~ 38121572 (+)
AMCG00021899 LOC108426911,LOC108257397,LOC107601986,LOC107707114,LOC107677659,LOC107591967 coding upstream 1653007 36465786 ~ 36501828 (+)
AMCG00021893 NA coding upstream 2141180 35984055 ~ 36013655 (+)
AMCG00021894 NA coding upstream 2267582 35864749 ~ 35887253 (+)
AMCG00021912 NA coding downstream 240674 38395806 ~ 38397674 (+)
AMCG00021914 NA coding downstream 700694 38855826 ~ 38865619 (+)
AMCG00021915 NA coding downstream 1203586 39358718 ~ 39369622 (+)
AMCG00021927 NA coding downstream 1305127 39460259 ~ 39461475 (+)
G89571 NA non-coding upstream 95301 38017304 ~ 38059534 (+)
G89554 NA non-coding upstream 552171 37602437 ~ 37602664 (+)
G89552 NA non-coding upstream 589620 37564974 ~ 37565215 (+)
G89538 NA non-coding upstream 896000 37258561 ~ 37258835 (+)
G89527 NA non-coding upstream 946583 37117552 ~ 37208252 (+)
G89579 NA non-coding downstream 3421 38158553 ~ 38161634 (+)
G89597 znf236 non-coding downstream 93782 38248914 ~ 38250240 (+)
G89607 NA non-coding downstream 227560 38382692 ~ 38382955 (+)
G89608 NA non-coding downstream 263789 38418921 ~ 38419128 (+)
G89606 NA non-coding downstream 269278 38424410 ~ 38425293 (+)
G89578 NA other upstream 3786 38121257 ~ 38151049 (+)
AMCG00021900 NA other upstream 1495591 36650232 ~ 36659244 (+)
G89299 NA other upstream 2187451 35964571 ~ 35967384 (+)
G89142 NA other upstream 2891298 35211133 ~ 35263537 (+)
AMCG00021881 LOC107748698,LOC102792383,LOC101481807,LOC108256925,LOC106919167,LOC108434168 other upstream 3077745 34926553 ~ 35077090 (+)
G89632 NA other downstream 662740 38817872 ~ 38822685 (+)
G89728 NA other downstream 1245392 39400524 ~ 39408261 (+)

Expression


Co-expression Network