G89598


Basic Information

Item Value
gene id G89598
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 38261387 ~ 38283855 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU111771
CGTTCACAGTACACCCGCCCTGAAACCTGGAACTATGCCGCGGGGCCGACCTCGCAAACTGAGGGACAAAACCAACGCTGAAACAGatggaTTACAAGAGTCAAACCCAGAAAACTCTGCTTATAGCAGCACAGACACCCGAGAATTCAAGTGCTCAATGTGCTCCCAGACATTCCCCAAGGACAGTCAACTACAGCGCCACCTCCGGGACCATGAAGTTAATGATAAGCCTCACCGGTGCGATCAGTGCCCTATGTCCTTCAACGTGGAATTCAACCTGACACTTCACAAGTCAACACATGCTTTACTGGAGCCTACCTGTCCAGTATGTCACAAAAAGTTCTCAAGAGTGGCCAGTCTGAAGTCCCATATAATGCTGCACGAAAAAGAGGAGAATTTGATCTGCTCCGAGTGTGGGGATGAATTCACTTTGCACAACCAGCTGTCAATGCACCTTGAAGACCACCGTAAGGAGCTGACAGGAAATAAGGTCTATCACTGTAAACTTTGCAACAAGGAGTTCAAAATCTCTGCCCTGCTGAAGGAACATATGAAAACCCATTATAAGATGAGG

Function

GO:

id name namespace
GO:0001570 vasculogenesis biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111771 True 574 TUCP 0.48 4 38261387 38283855

Neighbor

gene id symbol gene type direction distance location
AMCG00021908 NA coding downstream 16350 38238138 ~ 38245037 (-)
AMCG00021909 NA coding downstream 36783 38180080 ~ 38224604 (-)
AMCG00021907 galr1,LOC107373077,LOC102797365 coding downstream 302854 37957755 ~ 37958533 (-)
AMCG00021906 sall3,LOC103388658,LOC102796582,LOC103369140 coding downstream 1026546 37212616 ~ 37234841 (-)
AMCG00021905 NA coding downstream 1090008 37091198 ~ 37171379 (-)
AMCG00021913 tshz1,LOC107592027,LOC107748691,LOC107696938,LOC107593600 coding upstream 535556 38819411 ~ 38826295 (-)
AMCG00021921 NA coding upstream 654752 38938607 ~ 38945501 (-)
AMCG00021920 znf407,LOC106583495,LOC106605077 coding upstream 760930 39044785 ~ 39052673 (-)
AMCG00021919 NA coding upstream 907043 39190898 ~ 39192682 (-)
AMCG00021917 NA coding upstream 925160 39209015 ~ 39234436 (-)
G89588 NA non-coding downstream 106266 38154760 ~ 38155121 (-)
G89587 NA non-coding downstream 107874 38153228 ~ 38153513 (-)
G89584 NA non-coding downstream 110337 38135260 ~ 38151050 (-)
G89570 NA non-coding downstream 280973 37980089 ~ 37980414 (-)
G89567 NA non-coding downstream 318707 37942347 ~ 37942680 (-)
G89609 NA non-coding upstream 65368 38349223 ~ 38349555 (-)
G89612 NA non-coding upstream 128192 38412047 ~ 38414262 (-)
G89617 NA non-coding upstream 137878 38421733 ~ 38422676 (-)
G89618 NA non-coding upstream 138845 38422700 ~ 38425440 (-)
G89625 NA non-coding upstream 207480 38491335 ~ 38491585 (-)
AMCG00021897 smim13,si:dkey-206d17.5,LOC107559689,LOC107551766 other downstream 1573745 36677106 ~ 36687642 (-)
AMCG00021896 tmem170b,LOC107734028,LOC107669975 other downstream 1723669 36524509 ~ 36537718 (-)
AMCG00021895 LOC102226217,LOC106946249,LOC103472391,LOC107092461,LOC103135126,LOC106918615,LOC105905342,LOC104924555,LOC108426791,LOC100705487 other downstream 1823037 36414879 ~ 36438350 (-)
G89368 NA other downstream 2314403 35943752 ~ 35946984 (-)
G89217 kif13a,LOC101479097,LOC102301062,LOC102786386 other downstream 2865616 35375016 ~ 35395771 (-)
G89611 NA other upstream 111716 38395571 ~ 38397755 (-)
AMCG00021918 cndp2,LOC103371436,LOC104951856,LOC105892098,LOC106958632,LOC106588296,LOC102776275 other upstream 972024 39255879 ~ 39276056 (-)
G89765 NA other upstream 1201978 39485833 ~ 39486288 (-)
AMCG00021924 eppk1,LOC106938278,LOC107592034 other upstream 1203042 39486897 ~ 39548802 (-)

Expression


Co-expression Network