G89606


Basic Information

Item Value
gene id G89606
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 38424410 ~ 38425293 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU111779
ATTTGACTTGAAAAtataatagttttttgtttgtttgtttgtttgtttctttcttttgttcattGGAGAGCCATTTCTGGAATGCTGTTATATTATGGATACAAATATTTGGTAGATTTTCCCTGCTCAGTTTATTATGGATGTATCTTACTAAAAGGCAGCTTAGAGAATACTCTTAAGAAGTGACTGTACCGAATGTATGTACTTAATGTCTCTCACGAAGTTGGGAAATGTACAACGTGTGTGTTGAATTCCATCCAAAACATGACTATTTTAGAAGTGATTAAGAAAtcgtttaaataaaatactataaaagATCATTATGGCATGTGAGACAAAATTGTTACATTGTCTTATGAATTATGTACATGGGTGCACAGTATAACACACGatattgcaaatatttatctttgttttctctgtgtacTTGATTCCAGAAGCTCTTTCTAAAAGTGGGAATCATACAAAACCATTCAGCCCCAgatcatttttttacattctttctttatttgtctttggCAACTGAAAAGGGTGCCATCCCAAAGAAACTGTCTATTCTCAGACTTTTGAGTTTAGTGTGTTCCCTTATGAGCAgtattgtattgatttgattgttATTTTAGTTGTTGAAATAGATAATagtatttaatgtgtatttgattggttgtagtatttattttcagtcattaTTGACAaactttcaaaatcaaatgttttaatgtttttagtttttttaattgcataacATTCTTAGAAACCATCCACTGACTTGTTACCAATGAGAAATTCTCTACCtcttcaaacaaaacatttctcacTTCTTAACAgttgttttatacattgttcaaattgtaatgtaatttccaCATTAAAGTGTTCAATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111779 True 884 lncRNA 0.30 1 38424410 38425293

Neighbor

gene id symbol gene type direction distance location
AMCG00021912 NA coding upstream 26736 38395806 ~ 38397674 (+)
AMCG00021910 NA coding upstream 282251 38137122 ~ 38142159 (+)
AMCG00021911 NA coding upstream 302838 38120324 ~ 38121572 (+)
AMCG00021899 LOC108426911,LOC108257397,LOC107601986,LOC107707114,LOC107677659,LOC107591967 coding upstream 1922582 36465786 ~ 36501828 (+)
AMCG00021893 NA coding upstream 2410755 35984055 ~ 36013655 (+)
AMCG00021914 NA coding downstream 430533 38855826 ~ 38865619 (+)
AMCG00021915 NA coding downstream 933425 39358718 ~ 39369622 (+)
AMCG00021927 NA coding downstream 1034966 39460259 ~ 39461475 (+)
G89608 NA non-coding upstream 5282 38418921 ~ 38419128 (+)
G89607 NA non-coding upstream 41455 38382692 ~ 38382955 (+)
G89597 znf236 non-coding upstream 174170 38248914 ~ 38250240 (+)
G89579 NA non-coding upstream 262776 38158553 ~ 38161634 (+)
G89583 NA non-coding upstream 269278 38154835 ~ 38155132 (+)
G89619 NA non-coding downstream 3130 38428423 ~ 38429446 (+)
G89621 NA non-coding downstream 7975 38433268 ~ 38433484 (+)
G89626 NA non-coding downstream 100132 38525425 ~ 38525678 (+)
G89634 NA non-coding downstream 428673 38853966 ~ 38855149 (+)
G89637 NA non-coding downstream 442370 38867663 ~ 38868357 (+)
G89578 NA other upstream 273361 38121257 ~ 38151049 (+)
AMCG00021900 NA other upstream 1765166 36650232 ~ 36659244 (+)
G89299 NA other upstream 2457026 35964571 ~ 35967384 (+)
G89142 NA other upstream 3160873 35211133 ~ 35263537 (+)
AMCG00021881 LOC107748698,LOC102792383,LOC101481807,LOC108256925,LOC106919167,LOC108434168 other upstream 3347320 34926553 ~ 35077090 (+)
G89632 NA other downstream 392579 38817872 ~ 38822685 (+)
G89728 NA other downstream 975231 39400524 ~ 39408261 (+)

Expression


Co-expression Network