G89619


Basic Information

Item Value
gene id G89619
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 38428423 ~ 38429446 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU111792
aactcctctaatcgacccCCTCTGTTtcttatacatcaaccagttcataatccactACTtacctgaatgcctacagcttccaatttgaggatgaGTTTTTGgagtggaaccttatcaaaagctttctggaaatctaagtatatcatataatatgcttTCACTTCATCTAcaactgcagttgcatgttccaaaaattctaataaataagtaagacatgatctgcctcatctacacatatgttgactatctccaagaatatggctttcattaagatgctcctctattttcggtctaataattttttccaaaattttacaggtgatgcaggtgagactgattggtctgtaatttcctggctcagttttgtcccctttcttgtggattggtatgacatttgctgtcttccagtcagttggctcatcccctgttctaaatgTCATTTGGGATagttgagttagcggcctataaatcatttccctcatttctttaagtactgttggaaatataccatctggcccaggtgatttgtttgtttttaattcagctaGTCCTTTTAGtacttcctcctcatttatcctgatctctcttagggtttgactggactgaacCTGTTactaacctgtggcatgttatctgttttttcttttgaaaaacctctgtgaaatactcatttagaacatttgccacatctttttcgttttccaagatacttcaatttttgccctttatctgtttcacttcctcctttattgaactcttgctgttttaatattgaaaaaagctatttgcattagCATTAGCTCcgagagctatgtttctttttatttccctctttgctttcctgccccctttcttaaggtctctttgcagctcaacatattctttgtattttgtttcgtctccatcccttttgtatgcgctatacaacattttctttctcttgatatttttttgcatacctctattaaaccattttggccaatgttttctggtcctcaatttgctaagttttggtacaaatttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111792 True 1024 lncRNA 0.36 1 38428423 38429446

Neighbor

gene id symbol gene type direction distance location
AMCG00021912 NA coding upstream 30749 38395806 ~ 38397674 (+)
AMCG00021910 NA coding upstream 286264 38137122 ~ 38142159 (+)
AMCG00021911 NA coding upstream 306851 38120324 ~ 38121572 (+)
AMCG00021899 LOC108426911,LOC108257397,LOC107601986,LOC107707114,LOC107677659,LOC107591967 coding upstream 1926595 36465786 ~ 36501828 (+)
AMCG00021893 NA coding upstream 2414768 35984055 ~ 36013655 (+)
AMCG00021914 NA coding downstream 426380 38855826 ~ 38865619 (+)
AMCG00021915 NA coding downstream 929272 39358718 ~ 39369622 (+)
AMCG00021927 NA coding downstream 1030813 39460259 ~ 39461475 (+)
G89606 NA non-coding upstream 3130 38424410 ~ 38425293 (+)
G89608 NA non-coding upstream 9295 38418921 ~ 38419128 (+)
G89607 NA non-coding upstream 45468 38382692 ~ 38382955 (+)
G89597 znf236 non-coding upstream 178183 38248914 ~ 38250240 (+)
G89579 NA non-coding upstream 266789 38158553 ~ 38161634 (+)
G89621 NA non-coding downstream 3822 38433268 ~ 38433484 (+)
G89626 NA non-coding downstream 95979 38525425 ~ 38525678 (+)
G89634 NA non-coding downstream 424520 38853966 ~ 38855149 (+)
G89637 NA non-coding downstream 438217 38867663 ~ 38868357 (+)
G89672 NA non-coding downstream 772831 39202277 ~ 39206399 (+)
G89578 NA other upstream 277374 38121257 ~ 38151049 (+)
AMCG00021900 NA other upstream 1769179 36650232 ~ 36659244 (+)
G89299 NA other upstream 2461039 35964571 ~ 35967384 (+)
G89142 NA other upstream 3164886 35211133 ~ 35263537 (+)
AMCG00021881 LOC107748698,LOC102792383,LOC101481807,LOC108256925,LOC106919167,LOC108434168 other upstream 3351333 34926553 ~ 35077090 (+)
G89632 NA other downstream 388426 38817872 ~ 38822685 (+)
G89728 NA other downstream 971078 39400524 ~ 39408261 (+)

Expression


Co-expression Network