G89634


Basic Information

Item Value
gene id G89634
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 38853966 ~ 38855149 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU111807
CGCCTGGGCGCTTGCTGCTTTCTCCTCGGCATACTCGCTGTTCAAGACTTTCCGCAAGACTTTTCATGCAGGAATCAAATGCCAGGGTAGTCacgaaggaaaaaaaaaagcaactttCTTTTCACGATGCTTCTTTGGATGATTTCTAGGTCTTCCTTTCCTTCTTTTTGCGGCGGTCGCTCAAAGTCTCCAGTTCAATTCAACGGTCTCGTtcgtaatatatatatatataaataaatacatatatctcTCAATCTGTCCCTTTAAAAATATTCTGTCCTGAAAAATCGAAAGCCAGCCAAAAAAAAGTCTCGAAAATAGACGGTGTGTGTATTTCGCCAACTCATAGCATGTTGAATTAAATCACGGGCTGCCCGCACATCAGTTTATGGCAGAAAAGAGAAGCAGTCATGAGAGGTTAGTTTCAGTCACTCCCCCCTTCTTCATCGGAAAGATCACAATCTAGCTACTTTGCAAATGTcttctttacacacacatatatttggggcaaaaaaaaaaaactcccacgGATAACCTCTTTGTTGTATTTCCGTAtcagttcctttttttttttttttttttacttcaaacaCTGCAAACGAAAAAACGAAGAGAAACAGACAGGCATTAGCAGGTTAATAATGTCAGTCACTCCGCCACCTCCGCCGGATCAGACAGCCTCCCGTCAGCGTGACTACTTTCTCTCGTCCTTGCGCCGCCGGAGTGCTTCGGCTTGTACTTACATACTAGTCATCAAATTGTTTTCGCCGCGGCTCGGAGTGAAGGCGAGTATTTGATCTAGAGCGGTGCATGAAACTGAGCgagaaaccaacaaaacacagacatctcCTCTCTGGGAGAGATGGATATGAACTAATTTCGCCTCTAAACTCCAGGGAGTGAACCAGGGTCTTGTCTTCTCGCTGAAAATGTAACACACATTCAGGATCCAGGAGGGCTCCAGACAGCCTCAACTGATAGACAGACACATCGAGTTGCTTTTCCTGCTTCACTTTTACTCCTCCCCTTGCTACACAAGCGTCACCCTGACAGTAAAACCTACCTGTCAATCTTTttaattgtcttgtttttttccttataACTGAACGACTTGACAAAGGAAGACTTAATAGATCACTGATGTGGAAATGTTACTTGGGAAGCTCAAATACTTTGCattggca

Function

GO:

id name namespace
GO:0030145 manganese ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111807 True 1184 lncRNA 0.43 1 38853966 38855149

Neighbor

gene id symbol gene type direction distance location
AMCG00021912 NA coding upstream 456292 38395806 ~ 38397674 (+)
AMCG00021910 NA coding upstream 711807 38137122 ~ 38142159 (+)
AMCG00021911 NA coding upstream 732394 38120324 ~ 38121572 (+)
AMCG00021899 LOC108426911,LOC108257397,LOC107601986,LOC107707114,LOC107677659,LOC107591967 coding upstream 2352138 36465786 ~ 36501828 (+)
AMCG00021893 NA coding upstream 2840311 35984055 ~ 36013655 (+)
AMCG00021914 NA coding downstream 677 38855826 ~ 38865619 (+)
AMCG00021915 NA coding downstream 503569 39358718 ~ 39369622 (+)
AMCG00021927 NA coding downstream 605110 39460259 ~ 39461475 (+)
G89626 NA non-coding upstream 328288 38525425 ~ 38525678 (+)
G89621 NA non-coding upstream 420482 38433268 ~ 38433484 (+)
G89619 NA non-coding upstream 424520 38428423 ~ 38429446 (+)
G89606 NA non-coding upstream 428673 38424410 ~ 38425293 (+)
G89608 NA non-coding upstream 434838 38418921 ~ 38419128 (+)
G89637 NA non-coding downstream 12514 38867663 ~ 38868357 (+)
G89672 NA non-coding downstream 347128 39202277 ~ 39206399 (+)
G89686 NA non-coding downstream 374682 39229831 ~ 39230146 (+)
G89688 LOC105019195,LOC106605538,LOC106579285 non-coding downstream 400729 39255878 ~ 39258480 (+)
G89695 cndp2,LOC106588296 non-coding downstream 413432 39268581 ~ 39269897 (+)
G89632 NA other upstream 31281 38817872 ~ 38822685 (+)
G89578 NA other upstream 702917 38121257 ~ 38151049 (+)
AMCG00021900 NA other upstream 2194722 36650232 ~ 36659244 (+)
G89299 NA other upstream 2886582 35964571 ~ 35967384 (+)
G89142 NA other upstream 3590429 35211133 ~ 35263537 (+)
G89728 NA other downstream 545375 39400524 ~ 39408261 (+)

Expression


Co-expression Network