G89688 (LOC105019195,LOC106605538,LOC106579285)


Basic Information

Item Value
gene id G89688
gene name LOC105019195,LOC106605538,LOC106579285
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 39255878 ~ 39258480 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU111862
TACCTCAGCAAAGAAGTAACAGTTTCCTCTTGTTCCATAGGTCAGAGCTGGCCTCCGGCTCAGCCAACCACAATCTGATATGATGATGTAATCAATGTCAGAAAAGAAGGTGTCTTTCCGTTGAGAAACCATAGCATCCAGGCCATTGGATCCAGTTTCCTCCATTCCTTCAATGATGTACTTCACATTGACAGGGAGTTCGATGTTCAGAGCCTGATATGCTTCGACTGCATGAATCCAGGCAAGAACTGGAGCTTTGTTATCAGATGCCCCTCTTCCATGCAGATTACCATTAATATCAGTCAGGTTGTAAGGCTCTGTTGCCCACCCATCCTCCTGTTTAGCAGGCTGGACATCAACATGGCCATAAACACAGACTGTCCgcttcttggggtcattcccaAACTGAGCTGTGACAACTTTCGGaagaggaattattttgccattGGGTAGCTCCTGATTACCAATATCCACCAAGTCCACTTTCCCACCCATTTTTCTGAGTTTCTCTGCAGTGATTTCCATCATTTTTTCCACTTCAGGTCTCTTCAGCGCATCACTGGAATCACTCTCCACAGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111862 True 579 lncRNA 0.46 4 39255878 39258480

Neighbor

gene id symbol gene type direction distance location
AMCG00021914 NA coding upstream 390259 38855826 ~ 38865619 (+)
AMCG00021912 NA coding upstream 858204 38395806 ~ 38397674 (+)
AMCG00021910 NA coding upstream 1113719 38137122 ~ 38142159 (+)
AMCG00021911 NA coding upstream 1134306 38120324 ~ 38121572 (+)
AMCG00021899 LOC108426911,LOC108257397,LOC107601986,LOC107707114,LOC107677659,LOC107591967 coding upstream 2754050 36465786 ~ 36501828 (+)
AMCG00021915 NA coding downstream 100238 39358718 ~ 39369622 (+)
AMCG00021927 NA coding downstream 201779 39460259 ~ 39461475 (+)
G89686 NA non-coding upstream 25732 39229831 ~ 39230146 (+)
G89672 NA non-coding upstream 49479 39202277 ~ 39206399 (+)
G89637 NA non-coding upstream 387521 38867663 ~ 38868357 (+)
G89634 NA non-coding upstream 400729 38853966 ~ 38855149 (+)
G89626 NA non-coding upstream 730200 38525425 ~ 38525678 (+)
G89695 cndp2,LOC106588296 non-coding downstream 10101 39268581 ~ 39269897 (+)
G89700 NA non-coding downstream 24378 39282858 ~ 39284151 (+)
G89703 NA non-coding downstream 28495 39286975 ~ 39292210 (+)
G89704 NA non-coding downstream 34284 39292764 ~ 39293383 (+)
G89705 NA non-coding downstream 34921 39293401 ~ 39293717 (+)
G89632 NA other upstream 433193 38817872 ~ 38822685 (+)
G89578 NA other upstream 1104829 38121257 ~ 38151049 (+)
AMCG00021900 NA other upstream 2596634 36650232 ~ 36659244 (+)
G89299 NA other upstream 3288494 35964571 ~ 35967384 (+)
G89142 NA other upstream 3992341 35211133 ~ 35263537 (+)
G89728 NA other downstream 142044 39400524 ~ 39408261 (+)

Expression


Co-expression Network