G89703


Basic Information

Item Value
gene id G89703
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 39286975 ~ 39292210 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU111886
GTTTTTGGCATCTTTGTTTCAGTGTCACCGACTGCTACTGTATTTGTAAAGAGCGAAGAATTTTTATGCCCAGAAGGAGAACAAATCTATGAAGTTTCTTATCTGTCTGAAGACATGGATATTAAATACTGCGAACAGACATGGAATGTGAATCAAAACaatGCTCCAGTGTCCATTTTTCTCAACACAAGTCAATGCACCAGTCCATGTACATGGTCAGCCTCTGGAAAGATCCACCTAAACCAGTGCCTTGATGTCATGCTAACAATTGTCTGCTCTACAGCAAATATAGCCACAGAAATCAGAGTATATTACCATGgTAAAAAGCTTAGAAGTTTGGGAGAGCGAAAGCATATAGgAGTCATTGTGAGCTTTTGTCTGTTTCTAGTCCTGATCACTGGTCTGCTGCTTTTAGTCTggatacataaattaaaaatactgcagAGAAGAGTatagacaaaataaattgtggAAACCGTAGCCGAAGATCTGCCTCACAAGCAAATAGCACAGCTGCTAAGACAACCTCTGAATCCCAGCCATTTTGACATCTTGGTGGAAAGTTGACCTCCTGCTGTGTAAACAACCcggcttttctgtttttaaatcttggAAGTCAGGGGGGCATCATCCACATAAAGCAGACACAGATAAAATGGAAAGCTGAGGTTTCTGTGCCAGGGAGGGCCTCCTCAGTTTTTCAGTTCAGGGAGGCACTGATTATTACCAATATTAATCAGTAGCTTTACTACTTCTATCTGGCTGATACAGGGGGTCCTTGAAAATTGTAGGGGATGCATTCTTGAAGATCAAGACAAATTGCGAAATGATAAATTAAGGGGAATTAATATCCATAACAAATAATGGGAATAGCTCTAGATGCGTTCCaacacaccaaaataaaataaaaatgtactcaTCTAAATGTCTTTCAAACTCTACAAACCACTCTTataattcattataaatatacttttatatacaaaataaatgtgtaactaGTACTGTATAACCTCTGTGAATGAACCAAACATAGTACTGTACCGTTTCTTAACACCAGCATTTTACTTAGCCCATCTCCAAAGCATTAAATCACATTATGTTAAATcaagacattaaaaatgaagtaatttgtactgttagtaaaatttgagagaaattattattcatacaatTGAGCATGAATTTGAGtgtaaaaaatcaaaacaaaatcactaaTCCCACAGTATCACTGTTCACAGGCTGAGAACACATGCTTTTATGGGATGATGAGAGTGTGAGTCTAGCAACAGTTACAATATTATGATTTAGTgctaaaatacttattttgcaCTTTCACAGTCACCATAGTTGGAGAAAGTAATAAGAATGGTAAGAGAGTAGTAGTGAGGAGTAGCTTGCTCTCGATTGCTCCGTTTTATCTTTGGttattttcatactgtaaaCACATCAGTATCCGCTGGCCACCATCCTGGGCAGATGCTTAGACCACGGAGTGACTTTGTAGCACGAATGTCAAAAGCTGCTGATGACTCTGCAAGGACAGATGacgaaaaactaaaaaacatccTATATTCATTAGCGATGTCTCTGCGAAATAACGAACAACGATTTGACGAATTGCGAGGACCCCCTGTACAGCGAAAGCCAGAACAGCAAAGAATATAATAACAAagactacattattttgttccttAGATGAAAATAGTATCCCAAAAGACCAATGGTTTAGAGATCTTATCAGTGTAGACAGAATCCCTTGGAAATCAGTACTACCTCATACCCTTTTTATCTCCTGCTGTAAGACATACAGCTATTTCAAAACAGAGTACTGCACAGGGTAAATAATACAGGATGTTATTTATCATAGAGCTATCCGCATCAAATATAAGTTTACATTGTACAGATTCTGTAGCAGACAATTTGATTTATGCTTTATAGTATTGCCCACTAATTCATCAGTTCTGGCACACAATTTTCACAGGTCATCTATCATTGTAGATTACCATTTTTGGTACACTAAACCCAGAACATTTTATGTCaagatatatatgtgtataaatattttcactTACCATAACAATGTGACAGAATACTACATAGGATCACTATACAAAGTGTTTCAAATATCAGTTGGAAAGCTTCTGAGATTATGTCCAAGGGAAGTGGTATTATACTTTCACACTTAGGAGGACAACTCATGAGAATGTTTTATATGGGTTAAATTAACAACCCAAGAAAAATACAGGGACATTTCCTTTATGCACAAATTTAATGTGAAACCCACAGCTATTTTTTCATCACCACTACCATGTGAAAATTGTTATTTATCTTGTGCTGTATTATGTGaaggaatgaataaataaatactg

Function

GO: NA

KEGG:

id description
ko05320 Autoimmune thyroid disease
ko05330 Allograft rejection

RNA

RNA id representative length rna type GC content exon number start site end site
TU111886 True 2372 lncRNA 0.36 5 39286975 39292210

Neighbor

gene id symbol gene type direction distance location
AMCG00021914 NA coding upstream 421356 38855826 ~ 38865619 (+)
AMCG00021912 NA coding upstream 889301 38395806 ~ 38397674 (+)
AMCG00021910 NA coding upstream 1144816 38137122 ~ 38142159 (+)
AMCG00021911 NA coding upstream 1165403 38120324 ~ 38121572 (+)
AMCG00021899 LOC108426911,LOC108257397,LOC107601986,LOC107707114,LOC107677659,LOC107591967 coding upstream 2785147 36465786 ~ 36501828 (+)
AMCG00021915 NA coding downstream 66508 39358718 ~ 39369622 (+)
AMCG00021927 NA coding downstream 168049 39460259 ~ 39461475 (+)
G89700 NA non-coding upstream 2824 39282858 ~ 39284151 (+)
G89695 cndp2,LOC106588296 non-coding upstream 17078 39268581 ~ 39269897 (+)
G89688 LOC105019195,LOC106605538,LOC106579285 non-coding upstream 28495 39255878 ~ 39258480 (+)
G89686 NA non-coding upstream 56829 39229831 ~ 39230146 (+)
G89672 NA non-coding upstream 80576 39202277 ~ 39206399 (+)
G89704 NA non-coding downstream 554 39292764 ~ 39293383 (+)
G89705 NA non-coding downstream 1191 39293401 ~ 39293717 (+)
G89764 NA non-coding downstream 193623 39485833 ~ 39486893 (+)
G89632 NA other upstream 464290 38817872 ~ 38822685 (+)
G89578 NA other upstream 1135926 38121257 ~ 38151049 (+)
AMCG00021900 NA other upstream 2627731 36650232 ~ 36659244 (+)
G89299 NA other upstream 3319591 35964571 ~ 35967384 (+)
G89142 NA other upstream 4023438 35211133 ~ 35263537 (+)
G89728 NA other downstream 108314 39400524 ~ 39408261 (+)

Expression


Co-expression Network