XLOC_000638 (BX855617.1)


Basic Information

Item Value
gene id XLOC_000638
gene name BX855617.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 50854364 ~ 50854478 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00001084
actggcagctagctctctgcaactgtcacatggtcgcccactaaagctaagcagggctgagcttggtctgtacctggatgggagaccacatgggaaagctaggttgctgctggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000115918

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00001084 True 115 rRNA 0.55 1 50854364 50854478

Neighbor

gene id symbol gene type direction distance location
XLOC_000637 NA coding upstream 45916 50733156 ~ 50808448 (+)
XLOC_000636 herc3 coding upstream 162826 50639416 ~ 50691538 (+)
XLOC_000635 si:ch73-190m4.1 coding upstream 217143 50613868 ~ 50637221 (+)
XLOC_000634 pkd2 coding upstream 297334 50538839 ~ 50557030 (+)
XLOC_000633 NA coding upstream 322670 50528134 ~ 50531694 (+)
XLOC_000639 otx2a coding downstream 66788 50921266 ~ 50929957 (+)
XLOC_000640 NA coding downstream 89114 50943592 ~ 50953558 (+)
XLOC_000641 mdh1aa coding downstream 114430 50968908 ~ 50990889 (+)
XLOC_000642 ugp2a coding downstream 142678 50997156 ~ 51015627 (+)
XLOC_000643 NA coding downstream 161380 51015858 ~ 51018551 (+)
XLOC_000632 NA non-coding upstream 461575 50389319 ~ 50392789 (+)
XLOC_000628 NA non-coding upstream 931491 49920790 ~ 49922873 (+)
XLOC_000626 NA non-coding upstream 1079424 49699382 ~ 49774940 (+)
XLOC_000651 BX547996.1 non-coding downstream 610990 51465468 ~ 51465582 (+)
XLOC_000655 CU464066.1 non-coding downstream 829041 51683519 ~ 51683618 (+)
XLOC_000656 NA non-coding downstream 840273 51694751 ~ 51717215 (+)

Expression


Co-expression Network