XLOC_000064


Basic Information

Item Value
gene id XLOC_000064
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 5706970 ~ 5728684 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00003019
CACCAGTCTTGAAGATCTCGTAGCGCAGGGAGAAACCGGCACCCTGGTGTGCGTAATCAGACACAAACTTGATGTGGATGAAGGGACCGGAGGAGATGATGGCGGGAGGAGCGATGTTACTGCAGTGTTTGCCCAGCAGGTCTGCAGACTCCGAATTCCCATCTCGGATCTCGATGAAGTCATACCTGGAATCCAGGCGTTCCAGCTCAAAGTGGGGGTTGAAGTTGAGCACGATGCGCTGTGAGGGTTCGGGTGCGCTGATCACCCACTGACAGCTCTGATGGGGCGGGTATTCCAGAGGGTATCCTGGAGATGTGATGTAGCCGGCTCCGCTGGCATCCAGGTGGCCTCCACATGTCTC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00003019 True 361 lncRNA 0.57 2 5706970 5728684

Neighbor

gene id symbol gene type direction distance location
XLOC_000063 cpo coding upstream 119395 5576151 ~ 5587575 (+)
XLOC_000062 atic coding upstream 202840 5437390 ~ 5504130 (+)
XLOC_000061 stk16 coding upstream 272709 5422439 ~ 5434261 (+)
XLOC_000060 tuba8l2 coding upstream 287854 5402476 ~ 5419116 (+)
XLOC_000059 NA coding upstream 393375 5311479 ~ 5313595 (+)
XLOC_000065 NA coding downstream 66329 5795013 ~ 5799092 (+)
XLOC_000066 abcb6a coding downstream 406492 6135176 ~ 6158609 (+)
XLOC_000067 cnppd1 coding downstream 433246 6161930 ~ 6185532 (+)
XLOC_000068 retreg2 coding downstream 461265 6189949 ~ 6210718 (+)
XLOC_000069 fastkd2 coding downstream 496809 6225493 ~ 6272146 (+)
XLOC_000057 NA non-coding upstream 676815 4901460 ~ 5030155 (+)
XLOC_000056 FO744838.1 non-coding upstream 1026493 4598060 ~ 4680477 (+)
XLOC_000054 CABZ01063288.1 non-coding upstream 1946936 3759924 ~ 3760034 (+)
XLOC_000053 NA non-coding upstream 1986367 3718666 ~ 3720603 (+)
XLOC_000072 NA non-coding downstream 651194 6379878 ~ 6554470 (+)
XLOC_000073 NA non-coding downstream 669526 6398210 ~ 6403223 (+)
XLOC_000076 NA non-coding downstream 936349 6665033 ~ 6668339 (+)
XLOC_000077 NA non-coding downstream 1030499 6759183 ~ 6760930 (+)

Expression


Co-expression Network