XLOC_006426


Basic Information

Item Value
gene id XLOC_006426
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 7747111 ~ 7749201 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00013750
attacattgtaaaaagtacattaacttttattcatatatatacagATTATGTTCAATGAATTACCTGTCGACTACAGAATTAGTTCCTGATGCATCTAAGAATGCAGaacaacaaagaaaagaaaacatcCACATGTCCACCTGCTTTGTGTTGCTGTCATCACTGATCGACGTTAAACGACTCTCTCGCTCCTTAAAGCACCTACAGCCTCAGGACTGATCCAaactgaaaaaacacacacacacacacacactgatccccAGAAGCATTTGAGCTGCTCTCGGGTGGTCTTGGCTGATGGAAGTGGAGGTGCGTGTCTGAGAActattatatttcttttatattaGTCAATTTTATAGCTCTTGTCTGGCTTCGACGTCTCCTGAAGTGTACATTAATTCAAAAACGACTAAAAGTGGACACTGAACTTTCAGAGCTGAGATCACCACAGTAAAGGGAaacagtttaaagggatagttcaaactCACCCATCACACCAAATCCTCAGAGACTTTTTTTCATGTTCAGaagacaaaggaagatattttagatgaaatcctggagctctctcttcctccatagacagcaatgatcCTATCTTGATCGAAGTTCAGACAAATATATATGTTCTgtggttcaatcagaatattatcaagctataAGAACAAATTTGTGtgaatgctgtaaaaaaaaaactttatttaacagtttctttttctcagtgtcagtatagagtGCGCCCTGGATGCCCACATGCAACTTCCTCTATTTGAAACAAAgcacaaaaaatgtgtttacatgacGTGCCCTATACTGACAATAAGATGAATCTGTTGATTGAagtcattattttagttttatttacacACAACAGTATTCTCGTAAATTGATATGACTCTGAAGGAAGGTATGTAGTGTGTTTTGTAGACTTTAAATGTCTCACTGCTGTCTatgaaggatgagagagctccaggatttcatctacaACATCTTCACTTGTGTTCCAGAAAAGGAACAAAGGTTTCTGGGGATTGAAAGTAATTGAGAGCAAGTAATTAATcacaattttgggtgaactaaccctttaacagaAAGGCCAGCAGAAACACACAGTGTGTCTGGGGGGGGGGACTGATCCGTCTAGGAGAAAACTCTTGAAGAACGAAAGCTGTAAAGAGCAAAAGTGCTACAGCACAAACCTGAGCAGCAAAATCATCTCTCTTTAAGACAAGTTAACGATaaaacaaacaaccatcaaaataaaataaaacctgacaTTCAGAGTTCAGCTGGTTCATTTAGTCGAACATATCAGTCAGCTATCTGGAATGTTGTAGAGGTGCACGACTATGAATTATGTGCGTGTACAACCCATGTTCAGTTGCTCAATGTTGAAAAAGAATGAGTAGTTCATCATTCCCTCACAATCATTTTGTTCCAAATATTTATGACTTCCCTCCTTCTGTggaataaaataagatatttggaGAAATGTGATAGTCCATActggaaaataaatatttgtttgtgttCTACAGAATAAAGAATGCCATAAAGGTTTGGAGTGAGATGTTGGTCAGTAAGTGATGAGAGAACTTCTATTCTTGGGTGAACTCTTCCTGTATGGCATATTGGATAAAGTTTatctaaaaatgacaatttagccatcatttactcgccctcaagtggttccaaactttgttgaacacaaaagaagatatttagaaaaatgttggtaaCCAGTGGCCATTAACTTACAACCATAGCAGTAAAACTAGCAGCTACAGAATACCAacattatttaaacatatataacaaaaataaacatttatggtaacactttataataactacatactataaatcatttatttagcattagcatctagtgaatttattatctgttaagcattaactctacattaataaatgttagtaaacagtttatagctacagctacaaatgctgtat

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00013750 True 1972 lncRNA 0.36 2 7747111 7749201

Neighbor

gene id symbol gene type direction distance location
XLOC_006425 pitx3 coding downstream 171895 7555720 ~ 7575216 (-)
XLOC_006424 si:dkey-196h17.9 coding downstream 272787 7462715 ~ 7474324 (-)
XLOC_006423 si:dkey-45k15.1 coding downstream 314396 7368994 ~ 7432715 (-)
XLOC_006421 NA coding downstream 424435 7269212 ~ 7322676 (-)
XLOC_006422 NA coding downstream 430172 7305415 ~ 7316939 (-)
XLOC_006427 macroh2a2 coding upstream 3848 7753049 ~ 7767600 (-)
XLOC_006428 NA coding upstream 419512 8168713 ~ 8230165 (-)
XLOC_006429 si:ch211-250c4.5 coding upstream 522842 8272043 ~ 8279533 (-)
XLOC_006430 atl2 coding upstream 532022 8281223 ~ 8304605 (-)
XLOC_006431 dhx57 coding upstream 571254 8320455 ~ 8353560 (-)
XLOC_006338 rn7sk misc downstream 6920886 825904 ~ 826225 (-)
XLOC_006471 BX537274.2 misc upstream 2515540 10264741 ~ 10264905 (-)
XLOC_006419 NA non-coding downstream 592274 7154322 ~ 7154837 (-)
XLOC_006417 NA non-coding downstream 1408453 6335364 ~ 6338658 (-)
XLOC_006411 NA non-coding downstream 1559367 6150221 ~ 6187744 (-)
XLOC_006434 BX004962.1 non-coding upstream 900510 8649711 ~ 8650051 (-)
XLOC_006435 BX004962.2 non-coding upstream 905918 8655119 ~ 8655447 (-)
XLOC_006437 NA non-coding upstream 1011493 8760694 ~ 8776477 (-)
XLOC_006458 NA non-coding upstream 1752566 9501767 ~ 9558425 (-)

Expression


Co-expression Network