XLOC_006434 (BX004962.1)



Basic Information


Item Value
gene id XLOC_006434
gene name BX004962.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 8649711 ~ 8650051 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00012458
TGACCTTTTTGGCCCCTTTTGCCTCCCGTAGCCGCGATTGCGCAACCCGGAAGAGAGACGCAACAGAAACGCAACGAgacgaacaaacacaaacacaaacggaCACACAGCGCAATCTCCCGTGTGCACCCGATCGATCGGCTGGTGGAGTGAAGGtaagttatgtgtgtgtgcgtgaatatgTGGGTGTACAGCTCTGCCGCAGGCCAGTGACAAACTCCTTTGTCACACCTTTGCACACT

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000094051

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00012458 True 242 processed_transcript 0.54 2 8649711 8650051

Neighbor


gene id symbol gene type direction distance location
XLOC_006433 prkceb coding downstream 48527 8452354 ~ 8601184 (-)
XLOC_006432 epas1b coding downstream 203370 8375612 ~ 8446341 (-)
XLOC_006431 dhx57 coding downstream 296151 8320455 ~ 8353560 (-)
XLOC_006430 atl2 coding downstream 345106 8281223 ~ 8304605 (-)
XLOC_006429 si:ch211-250c4.5 coding downstream 370178 8272043 ~ 8279533 (-)
XLOC_006435 BX004962.2 coding upstream 5068 8655119 ~ 8655447 (-)
XLOC_006436 mcfd2 coding upstream 32125 8682176 ~ 8692860 (-)
XLOC_006437 NA coding upstream 110643 8760694 ~ 8776477 (-)
XLOC_006438 calm2a coding upstream 127582 8777633 ~ 8785610 (-)
XLOC_006439 si:ch73-105b23.6 coding upstream 149117 8799168 ~ 8815530 (-)
XLOC_006338 rn7sk misc downstream 7823486 825904 ~ 826225 (-)
XLOC_006471 BX537274.2 misc upstream 1614690 10264741 ~ 10264905 (-)
XLOC_006428 NA non-coding downstream 419546 8168713 ~ 8230165 (-)
XLOC_006426 NA non-coding downstream 900510 7747111 ~ 7749201 (-)
XLOC_006421 NA non-coding downstream 1327035 7269212 ~ 7322676 (-)
XLOC_006422 NA non-coding downstream 1332772 7305415 ~ 7316939 (-)
XLOC_006419 NA non-coding downstream 1494874 7154322 ~ 7154837 (-)
XLOC_006458 NA non-coding upstream 851716 9501767 ~ 9558425 (-)
XLOC_006467 NA non-coding upstream 1427164 10077215 ~ 10118935 (-)
XLOC_006468 NA non-coding upstream 1500868 10150919 ~ 10232078 (-)

Expression



Co-expression Network