XLOC_006435 (BX004962.2)



Basic Information


Item Value
gene id XLOC_006435
gene name BX004962.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 8655119 ~ 8655447 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00012459
TGACCTTTTTGGCCCCTTTTGCCTCCCGTAGCCGCGATTGCGCAACCCGGAAGAGAGACGCAACAGAAACGCAACGAgacgaacaaacacaaacacaaacggaCACACAGCGCAATCTCCCGTGTGCACCCGATCGATCGGCTGGTGGAGTGAAGGtaagttatgtgtgtgtgcgtgaatatgTGGGTGTACAGCTCTGCCGCAGGCCAGTGACAAACTCCTTTGTCACA

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000095141

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00012459 True 230 processed_transcript 0.54 2 8655119 8655447

Neighbor


gene id symbol gene type direction distance location
XLOC_006434 BX004962.1 coding downstream 5068 8649711 ~ 8650051 (-)
XLOC_006433 prkceb coding downstream 53935 8452354 ~ 8601184 (-)
XLOC_006432 epas1b coding downstream 208778 8375612 ~ 8446341 (-)
XLOC_006431 dhx57 coding downstream 301559 8320455 ~ 8353560 (-)
XLOC_006430 atl2 coding downstream 350514 8281223 ~ 8304605 (-)
XLOC_006436 mcfd2 coding upstream 26729 8682176 ~ 8692860 (-)
XLOC_006437 NA coding upstream 105247 8760694 ~ 8776477 (-)
XLOC_006438 calm2a coding upstream 122186 8777633 ~ 8785610 (-)
XLOC_006439 si:ch73-105b23.6 coding upstream 143721 8799168 ~ 8815530 (-)
XLOC_006440 si:ch73-105b23.1 coding upstream 169745 8825192 ~ 8829392 (-)
XLOC_006338 rn7sk misc downstream 7828894 825904 ~ 826225 (-)
XLOC_006471 BX537274.2 misc upstream 1609294 10264741 ~ 10264905 (-)
XLOC_006428 NA non-coding downstream 424954 8168713 ~ 8230165 (-)
XLOC_006426 NA non-coding downstream 905918 7747111 ~ 7749201 (-)
XLOC_006421 NA non-coding downstream 1332443 7269212 ~ 7322676 (-)
XLOC_006422 NA non-coding downstream 1338180 7305415 ~ 7316939 (-)
XLOC_006458 NA non-coding upstream 846320 9501767 ~ 9558425 (-)
XLOC_006467 NA non-coding upstream 1421768 10077215 ~ 10118935 (-)
XLOC_006468 NA non-coding upstream 1495472 10150919 ~ 10232078 (-)
XLOC_006469 NA non-coding upstream 1594727 10250174 ~ 10253034 (-)

Expression



Co-expression Network