XLOC_006460 (CR848040.3)


Basic Information

Item Value
gene id XLOC_006460
gene name CR848040.3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 9524382 ~ 9525527 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00012535
aacaactcttctttatctataggccatgttccaaactcttacaagctagctgttattaagcctcttattaagaaaccgcaactggaccccaacaacttagctaactataggcctatttcaaatcttccatttctgtctaaaatactagaaaaagttgtttctactcaattatgctcctttctgcagacgaacaatatttttgaagtgtttcagtcaggtttcagggctcatcacagtacagaaaccgccttagtgaaaataaccaacgatttactcttagctgctgaccaagggtgcatctcTCTATTAGCTCTACTCGATCTTAGagcggcatttgacaccattgaccacaatatcctcataaatcgcttaaagtctacaggtgtccagggacaagctctacaatggtttaagtcatacttaactgaccgttaccagtatgtgaatattaatggacagccttcacaagtcagcccattAAAGTATgaggtgcctcaaggatcagttttaggccctttgctgtttacaatttacatgctaccactgggagacattattagaagacatgggataagctttcactgctatgcagatgatactcaattatatatttcaactaaacctaatgagatgtctgaactgtctaagctaactgagtgtattagagatgttaaagactggatgaccaaaaattttcttctattaaactcagacaaaacagaattattacttattgggcctaaatcctgtacacagcagttctcgcaactcaatctacaattagagggacacaaagttagcgttagctctactataaaagatctgggtgttatattagacagcaatttaacttttgaaaatcataaatCCCACGTcgcaaaaactgccttctttcatctgagaaatatcgctaaattatgaagtatgctatccatcttggatgcagaaaagctagtccatgcttttatgacttctaggctggattactgtaatgctctatttgctggctgcccagcatcctattttaacaaacttcaattagtacaaaatgcacctgccagagttcttaccaggtctagaaaatatgatcatatcaccccaattttatcctttTTCCTTTTgtgtagcgcaaaatgcggaggaccc

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000116065

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00012535 True 1146 mRNA 0.38 1 9524382 9525527

Neighbor

gene id symbol gene type direction distance location
XLOC_006459 pimr152 coding downstream 3377 9517816 ~ 9521005 (-)
XLOC_006457 pimr152 coding downstream 28241 9492954 ~ 9496141 (-)
XLOC_006456 pimr152 coding downstream 56438 9464758 ~ 9467944 (-)
XLOC_006455 pimr152 coding downstream 74172 9447020 ~ 9450210 (-)
XLOC_006454 grxcr1b coding downstream 81440 9440326 ~ 9442942 (-)
XLOC_006461 pimr152 coding upstream 17653 9543180 ~ 9546366 (-)
XLOC_006462 cpxm1a coding upstream 49989 9575516 ~ 9608943 (-)
XLOC_006463 sfxn4 coding upstream 305483 9831010 ~ 9841806 (-)
XLOC_006464 tm9sf3 coding upstream 329853 9855380 ~ 9875538 (-)
XLOC_006465 si:ch211-117n7.7 coding upstream 353017 9878544 ~ 9886579 (-)
XLOC_006338 rn7sk misc downstream 8698157 825904 ~ 826225 (-)
XLOC_006471 BX537274.2 misc upstream 739214 10264741 ~ 10264905 (-)
XLOC_006437 NA non-coding downstream 747905 8760694 ~ 8776477 (-)
XLOC_006435 BX004962.2 non-coding downstream 868935 8655119 ~ 8655447 (-)
XLOC_006434 BX004962.1 non-coding downstream 874331 8649711 ~ 8650051 (-)
XLOC_006428 NA non-coding downstream 1294217 8168713 ~ 8230165 (-)
XLOC_006426 NA non-coding downstream 1775181 7747111 ~ 7749201 (-)
XLOC_006467 NA non-coding upstream 551688 10077215 ~ 10118935 (-)
XLOC_006468 NA non-coding upstream 625392 10150919 ~ 10232078 (-)
XLOC_006469 NA non-coding upstream 724647 10250174 ~ 10253034 (-)
XLOC_006472 NA non-coding upstream 749759 10275286 ~ 10346890 (-)
XLOC_006476 AL928999.1 non-coding upstream 1386959 10912486 ~ 10912602 (-)

Expression


Co-expression Network