XLOC_006502


Basic Information

Item Value
gene id XLOC_006502
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 12586997 ~ 12587412 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00013467
CTCTACCAGACCTTTGAAGGTTTCCTTTGACTCCAAGCCAACAACTGGAGATCTTTTAGGTCTGTTAGGTTCCAAGGTGGAGCCTAAATTTGGCTGCCAGATCAATACCTTGAAATCTTCATCATGTTCTTTAAAGATGCAGGGAAAAAACAGATCCAGAGCTTTCGAACATTGACCAGACAATCACACACTCGGCCTCCACCAGCTTGTTGTCATCATACAGTGCATCCATGTGCCATCACTTCCCCCAGGTAAACAGTGCACACGAACACAGCTGTGAGCTCACGACATATCGGTCATC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00013467 True 301 lncRNA 0.46 2 12586997 12587412

Neighbor

gene id symbol gene type direction distance location
XLOC_006501 enpep coding downstream 5609 12543634 ~ 12581388 (-)
XLOC_006500 si:dkey-20i10.7 coding downstream 92422 12488863 ~ 12494575 (-)
XLOC_006499 lamtor3 coding downstream 100921 12479264 ~ 12486076 (-)
XLOC_006498 commd8 coding downstream 197249 12378074 ~ 12389748 (-)
XLOC_006497 NA coding downstream 468747 12117113 ~ 12118250 (-)
XLOC_006503 lrit3b coding upstream 4096 12591508 ~ 12602920 (-)
XLOC_006504 adh8b coding upstream 45811 12633223 ~ 12646752 (-)
XLOC_006505 adh8a coding upstream 66563 12653975 ~ 12660318 (-)
XLOC_006506 fam241a coding upstream 77454 12664866 ~ 12667220 (-)
XLOC_006507 NA coding upstream 161240 12748652 ~ 12756661 (-)
XLOC_006471 BX537274.2 misc downstream 2322092 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 11760772 825904 ~ 826225 (-)
XLOC_006496 CR792443.1 non-coding downstream 481103 12105778 ~ 12105894 (-)
XLOC_006492 CR792443.2 non-coding downstream 612429 11974452 ~ 11974568 (-)
XLOC_006482 CR556710.1 non-coding downstream 1021134 11565736 ~ 11565863 (-)
XLOC_006480 NA non-coding downstream 1141217 11442838 ~ 11445780 (-)
XLOC_006510 NA non-coding upstream 999884 13587296 ~ 13590570 (-)
XLOC_006511 CR788322.1 non-coding upstream 1057033 13644445 ~ 13644562 (-)
XLOC_006513 CR788322.4 non-coding upstream 1083028 13670440 ~ 13670537 (-)
XLOC_006514 NA non-coding upstream 1150130 13737542 ~ 13740560 (-)

Expression


Co-expression Network