XLOC_006507


Basic Information

Item Value
gene id XLOC_006507
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 12748652 ~ 12756661 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00013764
GCTTTTGTTAGAGCTCTTGCCTTCTGCTTGATTTGCTTAGCTCCATTATGTGTTAGAAATATAGCAACGGATTACTTGCAGTTCACCGAGTGTGCGGCTTTGGTATTAGAGTGATGAGAGGCTGATTAAGAAGTCATTACATCTGTCAGAGTGATTTCCCTCCACCCTGTTTCTCATCCCATCATTCTGTGGTGTGGAAGAGTGGAGATGCACTGCGCCTGCTCACCCCAGCCTGCACAGAGTATAAGGTTGCTGTGAGCCTGTGAGGTGCCAAAAATCCTTGTTTGAATGGCTGAGAGAGAATAGAGACAGATCTACCCTTTCACTGTTGGCCAGACAGTGGTTGATCCAGGACACTATGATCCCAGAGACTGTAGCGTACACGGTGTATTTAAAAGCTCAGCTTAAATGTGAGCTATAAATAAAGAGCGCTCTCAAACAGCTGGTGAAATAGTATTCCCCATTTTAACAGAGTAAAGACTTCAACCAGAAACTCTTTaagttaaaaactgttttttttttaaagtagttggAGACATGCAAGTGAGATGACGCTTTGTATGCAATGGATTCACCAGTTAtagtacatttgtaaaaaaaataa

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00013764 True 604 lncRNA 0.42 3 12748652 12756661

Neighbor

gene id symbol gene type direction distance location
XLOC_006506 fam241a coding downstream 81432 12664866 ~ 12667220 (-)
XLOC_006505 adh8a coding downstream 88334 12653975 ~ 12660318 (-)
XLOC_006504 adh8b coding downstream 101900 12633223 ~ 12646752 (-)
XLOC_006503 lrit3b coding downstream 145732 12591508 ~ 12602920 (-)
XLOC_006502 NA coding downstream 161240 12586997 ~ 12587412 (-)
XLOC_006508 nsd2 coding upstream 237190 12993851 ~ 13030851 (-)
XLOC_006509 fgfr3 coding upstream 456906 13213567 ~ 13294872 (-)
XLOC_006510 NA coding upstream 830635 13587296 ~ 13590570 (-)
XLOC_006511 CR788322.1 coding upstream 887784 13644445 ~ 13644562 (-)
XLOC_006512 pimr47 coding upstream 903903 13660564 ~ 13662624 (-)
XLOC_006471 BX537274.2 misc downstream 2483747 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 11922427 825904 ~ 826225 (-)
XLOC_006497 NA non-coding downstream 630402 12117113 ~ 12118250 (-)
XLOC_006496 CR792443.1 non-coding downstream 642758 12105778 ~ 12105894 (-)
XLOC_006492 CR792443.2 non-coding downstream 774084 11974452 ~ 11974568 (-)
XLOC_006482 CR556710.1 non-coding downstream 1182789 11565736 ~ 11565863 (-)
XLOC_006513 CR788322.4 non-coding upstream 913779 13670440 ~ 13670537 (-)
XLOC_006514 NA non-coding upstream 980881 13737542 ~ 13740560 (-)
XLOC_006516 NA non-coding upstream 1256524 14013185 ~ 14015180 (-)

Expression


Co-expression Network