XLOC_006544 (zfand4)


Basic Information

Item Value
gene id XLOC_006544
gene name zfand4
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 18019709 ~ 18069421 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00012669
AGAACATCACAATAGGCTGCCTCCTCTTCAGATTCTTGCATTCCCTCTTAATGGAGCCGCATAACATCGGAACAAAAGCAATTGTTTGTGGCTCGCCAAAATTAGGAAGCGTCTTTCCGTGAAGAAACGGAAAAGACATCCGCAAGCGTCTACAGCATCCGCGGGTAATTCGTCGGGCTGCCCGTGCCGCTTTGCTAAACTAGCTAGCAACTAAAACAGAATTAAAGCACCTTTTATTGTGAGTTCCTGTCAGATACCAGTTCTTGGGCTGCGGAGGCTCAGTCTCGTTTACCTTTAGAGATATCTCTCTGGCTTTCGGAGTTTAGTATTCATATTTTTACCTGGGACATCAGCCAGTTCGTGATCCATTTGTCCCTCCCTGCAGATCTGTCCTGATGCTGTCAAGGTCAAAGCTCAGTGCATGATGTGTTTCTGCTGTGACGGAGAAGACCTCCACCTTGGGCAGGGTTCATTGTTGTCTCTTCCTGATCCCTGTCCTCCGCAATAATGACTGACAAGAGGAACCCACCGTTTTTCAATGATGACAATGTAGGCGTGCTGCACTACAAGCTGCCCTTCAGCGAGACCATGGAGCTGTTCATTGAGACTCTGACAGGAACATGCTTCCAGCTGCGTGTCTCTCCATTTGAACAGGTCGTCTCCGTCAAGGCCAAGATTCAGAGATTGGAGGGCATCCCGGTGTCTCAGCAGCATTTGATTTGGAATGGTATGGAGCTTGAAGATGAGTACTGCTTACATGATTACAGCATCACAGAGGGCTGCACACTCAAGCTGGTGCTCGCCATGAGAGGAGGACCTGTAAACACTAGACGAGTGACAGTGACAGATGACTCTGTGCGGGATATCAGCGACTGCCTTGATGCCGGGAGAGAGGAGATGTGGGAAAAATCTCTGCCTAATAAACAGGTCACCTTCCTGGTGTACCGCGAGGGAGACCAGCTCAATTTCTTCCGCGTGGTGGATCGGGGCGATGGGACACTCACACCTGTGTCTGAATCATTGAGtggtgcttctgtACGAAATGTGCGcgcagaggaggaggaggaacaaGAAAGTGCTTCTTCAGAGCTGCAGACGCTAGAAAACTCCATCACAATGGGCAAAATGAAGCTGCTCAAGGCCAAGATGGAGAACATGAACCTTAACAAAAAGcccaAAAAGACTGCTAAATTAAAAATCCGACCTCCAGTGGGTCCGCGACCTTGCAGCGGTTCCCACGGCTCTGCCCGACACCATCGAATGTTCCGTGTCCTTCCTCAAATAGGACACGCCTCTTCAACACATCTACCTCCTATCGGTGATCAGCAGCAACCTGTATTGTCCACCCCCACTGCTGGCTCCGCCCACCAACCCTACACATCTCTCTCCAGTCCTGCTTCCTCAAGCCGTGCTCATCCATCCTCTGCAGCCTCTGGCATATACATGCTGCAGGCTGAGGAACCATGGGATAATCCAGTGCCCAGGAAGATTAGACTCCCTCCCAAAGTATCCCGGCTGGATATGAGAGGGCCTAAAGTCATGCGAGACTGCGTCTACCCGCCTCTATCTCTTCTGTCCAGCCCTGGAGTTCAGGATGAAGTCGATATCAAGAACGAACACCTAACACTAACTGAGAAAACCACAGTTATTGAGTCGCCCAAAGCTGTGCCCTTCAATCTTCCTGAACCCCTGAGTTTGGATGTATCTGCTCAGCGAGAGCGAAGTCTGAACTCTTTAACGATGCCTGAGGCCAACGCCGCAGCTCCTCTTCTTTCCCAAGCCGTCAACTCTAATTGGAGACTACCATCCCAACATGACCTTACCCTCACCACTGAGCCCTTCACACCTCCACGTCATTTTGAGTTCACCGGTTCCTCAGTTCATCCCAGTCCGTCTCATGCTCTCCTCAGAACTAGCCCATCTCTCCCCATCAGTTCTCCTTCAAAAACTACATTCAAAGTTGATAAGCACTCAGAGGTGATTTCCAAAAGCGAAGCCCGAGACATTACAAACCTGGCCAATAAAGCCACTAAAGAGCCATTGGGATCGGTGAGCAACGCAGAACTTCTGGCCTCCTTGGCGGGCAGCGGTGGTCAGGAGACCTTGACCAGTCCTTACGCTTTGGGAAGGTTGTGTGCCACCGCCGCGCCCCTTCCAAACAACATCCATCTGTTGCAGGAGGACCTGCTGAGGAGGATCTCCCCCCTACAGCGCACAGCTGGCTTCACGGCATCAAGCTCATCAAGTGGCCTCTCCAGTTCAATAAAGAGATTAGGGACTCAGACGCATCACTTGCCCCCTGTGAAGGTTTCCTCTGGAGTGAAGAAGAAGAGCTCAAAGCACTGCTTCCTGTGTGGAAAGAAGACGGGATTAGCTACCAGTTATGAATGCAGGTGTGGCAACATCTTCTGTTCCATTCACCGCTACTCGGAGACCCACGACTGCACCTACGACTACAAAAGCGCAGGCCGACGCTTCCTACAGGAAACCAACCCCATCGTAAGCGCACCGAAGCTGCCCAAAATATGAAGGAAAAGCGTGGCAAGAAGGAAACAAAAGACAACTATTAAATAAGAGAAAAACCTTGA
>TCONS_00012670
AGAACATCACAATAGGCTGCCTCCTCTTCAGATTCTTGCATTCCCTCTTAATGGAGCCGCATAACATCGGAACAAAAGCAATTGTTTGTGGCTCGCCAAAATTAGGAAGCGTCTTTCCGTGAAGAAACGGAAAAGACATCCGCAAGCGTCTACAGCATCCGCGGGTAATTCGTCGGGCTGCCCGTGCCGCTTTGCTAAACTAGCTAGCAACTAAAACAGAATTAAAGCACCTTTTATTGTGAGTTCCTGTCAGATACCAGTTCTTGGGCTGCGGAGGCTCAGTCTCGTTTACCTTTAGAGATATCTCTCTGGCTTTCGGAGTTTAGTATTCATATTTTTACCTGGGACATCAGCCAGTTCGTGATCCATTTGTCCCTCCCTGCAGATCTGTCCTGATGCTGTCAAGGTCAAAGCTCAGTGCATGATGTGTTTCTGCTGTGACGGAGAAGACCTCCACCTTGGGCAGGGTTCATTGTTGTCTCTTCCTGATCCCTGTCCTCCGCAATAATGACTGACAAGAGGAACCCACCGTTTTTCAATGATGACAATGTAGGCGTGCTGCACTACAAGCTGCCCTTCAGCGAGACCATGGAGCTGTTCATTGAGACTCTGACAGGAACATGCTTCCAGCTGCGTGTCTCTCCATTTGAACAGGTCGTCTCCGTCAAGGCCAAGATTCAGAGATTGGAGGGCATCCCGGTGTCTCAGCAGCATTTGATTTGGAATGGTATGGAGCTTGAAGATGAGTACTGCTTACATGATTACAGCATCACAGAGGGCTGCACACTCAAGCTGGTGCTCGCCATGAGAGGAGGACCTGTAAACACTAGACGAGTGACAGTGACAGATGACTCTGTGCGGGATATCAGCGACTGCCTTGATGCCGGGAGAGAGGAGATGTGGGAAAAATCTCTGCCTAATAAACAGGTCACCTTCCTGGTGTACCGCGAGGGAGACCAGCTCAATTTCTTCCGCGTGGTGGATCGGGGCGATGGGACACTCACACCTGTGTCTGAATCATTGAGGTCAGTTCAAAGAAGAGAAATGACTCGCTAAGAGGAACAACTGCATGCGCACTACACTCTACTTCCCCTTTTTTAGATGCAAGCAGATGTTTCAGAGCTACTGTCTTCATGTGTCATGCTGTTTTAGCAATGAAGATATGCTTCAGCATGTACTGGTAAA

Function

symbol description
zfand4 Predicted to enable zinc ion binding activity. Orthologous to human ZFAND4 (zinc finger AN1-type containing 4).

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
ko04121 Ubiquitin system
ko04990 Domain-containing proteins not elsewhere classified

ZFIN:

id description
ZDB-GENE-090312-102 Predicted to enable zinc ion binding activity. Orthologous to human ZFAND4 (zinc finger AN1-type containing 4).

Ensembl:

ensembl_id ENSDARG00000076703

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00012669 False 2588 mRNA 0.51 10 18019709 18069421
TCONS_00012670 True 1185 mRNA 0.49 5 18045958 18069421

Neighbor

gene id symbol gene type direction distance location
XLOC_006543 march8 coding downstream 8501 17751866 ~ 18011208 (-)
XLOC_006542 vdac2 coding downstream 290235 17714296 ~ 17729474 (-)
XLOC_006541 NA coding downstream 325890 17686484 ~ 17693819 (-)
XLOC_006540 NA coding downstream 489173 17494297 ~ 17530536 (-)
XLOC_006539 lrmda coding downstream 555055 16922705 ~ 17464654 (-)
XLOC_006545 washc2c coding upstream 3790 18073211 ~ 18122333 (-)
XLOC_006546 alox5a coding upstream 58854 18128275 ~ 18174864 (-)
XLOC_006547 slc25a16 coding upstream 109675 18179096 ~ 18195942 (-)
XLOC_006548 si:dkey-228d14.5 coding upstream 263264 18332685 ~ 18345854 (-)
XLOC_006549 BX908770.1 coding upstream 452072 18521493 ~ 18548729 (-)
XLOC_006471 BX537274.2 misc downstream 7754804 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 17193484 825904 ~ 826225 (-)
XLOC_006538 NA non-coding downstream 1140639 16868380 ~ 16879070 (-)
XLOC_006537 BX323467.1 non-coding downstream 1711826 16307767 ~ 16307883 (-)
XLOC_006536 NA non-coding downstream 1758136 16260651 ~ 16261573 (-)
XLOC_006551 CR932438.1 non-coding upstream 575469 18644890 ~ 18645005 (-)
XLOC_006552 CR932438.2 non-coding upstream 580071 18649492 ~ 18649682 (-)
XLOC_006554 CR932361.2 non-coding upstream 645889 18715310 ~ 18715426 (-)
XLOC_006556 NA non-coding upstream 940751 19010172 ~ 19016833 (-)
XLOC_006557 NA non-coding upstream 1206752 19276173 ~ 19277332 (-)

Expression


Co-expression Network