wipf1a (LOC107657348,LOC107600727)


Basic Information

Item Value
gene id wipf1a
gene name LOC107657348,LOC107600727
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 4142290 ~ 4150239 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU100089
GATTGGTCTGCGGAGTCACAGAGAGGAAGTGCAAGCGCGACTTTCTACGAGACCTCGGATCTGGTGCCTCCAAATGCTCGGACGCAGGTGAGTGTTTCTTTAAGTGGAGGTTGAGAGGGAGGGAGAAGCGGTGGCCCGGCTGGAGAGCATCCCTCGCCGGATGAGCGCTGGGTTTTCTCTGTAAGCTGCTGCTTTTTCTGACAGTGCTCGACCACAGAGGAAACTCAACAGAGGAAGCGGCTCGCTCTCTCGACTTCACAGAGCTTctgaacaaaactaaaacaactgTCCGCTCGCTGTGTTCGATCGCATCTCAGATAGTAAAACTCTTTTAGGTTAGTGATAAAGAAGAGGAAATATGTCCGGACCGCCACCACCGCCCCCTCCTGGCCCTCCTCCAACCTTCGCACTGGCAAACACAGAAAAGCCAAATCTGAGCAGATCCGAGCAGCAAGGGAGAAACGCTTTGCTATCAGATATCAGCAAAGGAGCTCGACTGAAGAAGGCCGTCACCAATGATCGGAGTGCCCCGGCGCTGGACAGTGAGTTCTCCTCGATCTCTGTAATATtgtacatgcatataaacatatatacctAACGTGcttgcaagtgtgtgtgtgtgtgttttatttttaagagtgtagagCCAAAGACGATTTGAAGAATGAATTCTTATGATcgtaatatgtttttatttacacag
>XM_043248049.1
GTTTCTTTAAGTGGAGGTTGAGAGGGAGGGAGAAGCGGTGGCCCGGCTGGAGAGCATCCCTCGCCGGATGAGCGCTGGGTTTTCTCTGTAAGCTGCTGCTTTTTCTGACAGTGCTCGACCACAGAGGAAACTCAACAGAGGAAGCGGCTCGCTCTCTCGACTTCACAGAGCTTctgaacaaaactaaaacaactgTCCGCTCGCTGTGTTCGATCGCATCTCAGATAGTAAAACTCTTTTAGGTTAGTGATAAAGAAGAGGAAATATGTCCGGACCGCCACCACCGCCCCCTCCTGGCCCTCCTCCAACCTTCGCACTGGCAAACACAGAAAAGCCAAATCTGAGCAGATCCGAGCAGCAAGGGAGAAACGCTTTGCTATCAGATATCAGCAAAGGAGCTCGACTGAAGAAGGCCGTCACCAATGATCGGAGTGCCCCGGCGCTGGACAaGCCCaaaggaggtggaggaggtggaggtggaggtggaggaggaggagcccAGGGTGGACTGGGTGGGCTGTTTCAGGGTGGGATGCCAAGACTGAGATCATCAGGAAACAGAGACAACACTGCAGTAAGACCACCGATGCCTCCTTCAGTGGGAGATTCCCAGCACCCGGCAGCCCAGCGGGAAACAGACCCCCGCTCCCGACCGCCGGGAGACCTTCTCCTGGGAGGGCCGGACCCCCACCTGTACCACATTCATCTCGCTCACCCCAGCACAGCTCTCCCAGCGGCCCACCGGCTCTACCTGGAGGACGCCCGTCAGGTCCCTCACCATCTCTTCCTCCCCCCAACCCGTCGAGCAGACGTCCAAGCCTTCCTCCACCGAGGGAGTCCCAGGCTTCCTTCCCTCCACCCCCGATGCCCTCAAGTGCCCGGCCCGTTACCCACAACCCCAAGCAGGCCTGCAGATGACTTCCCTCCGCCTCCACCACCcactggaggaaaaaaagagtcattttctCGAAATGGACCATTACCACCCCCGCCGCCATCAACCGAGAGTAAACCACTGAGTTCTCAGAGGCCTATGGGTAATCCGCCTCCATCCTTACCTccaggaagaggaggagcgCCACCCGTCCCGCCATCCTCACGGGACGAGCTCAGCTCAAGAGGCTCTCAGAGAAACAgctttcctcctcctccgcctCCTGGCCGCTCCAGCCCGCTGCCGCCACCGCCCAATGAGAGGCCGCCTCCATCGGGAAGAAGCCCATCCATACGGTCAGGTCCTCTACCACCTCCACCCACTGGAGGAGGAGGCAGAGGAACGGCTCCCCCCGTGCCTCCTCCCAACCGGCCCGGAGGATCAGGGAGACCCCCTCTACCTCAGGACCCTCCCAAAGTGCCCAGCTTCCCTCCACCACCCCCTGACACCATCAATGGCTACCAGTGCCCTCCACCACCTGCCACAGATGAGTGGGGGAAGAGGTTTTCCTTCCATCCTCTGTCTGAATTACCTCCACCAGAGCCGTACACCTCCTTCTCCAAGTCTTACCCCAGCAAAGCGGGTGGCAAAGGAACGAGAGACAGAGGAGCGCCACCGTTGCCACCCATTCCCAGATGAAATGCTTTGATATTATATAGCGGGATCTGGATTTTCATCGGCTGAATGAGACTCAGGAACTCTTCtgtgaaaatatgaatgtttttagcTTTTCAGTTACATTTTCCAAATCACTTTTGCGTGCATTGCGGGTTTTTATATCATGGTACGAATGTATGTCCAGATATAGCGATTAAAGTGCATTCTGTCGTCTTTTGA

Function

NR:

description
PREDICTED: WAS/WASL-interacting protein family member 1-like isoform X1

GO:

id name namespace
GO:0008154 actin polymerization or depolymerization biological_process
GO:0015629 actin cytoskeleton cellular_component
GO:0003779 actin binding molecular_function

KEGG:

id description
K19475 WIPF; WAS/WASL-interacting protein

RNA

RNA id representative length rna type GC content exon number start site end site
TU100089 False 703 lncRNA 0.49 3 4147342 4150239
XM_043248049.1 True 1771 mRNA 0.57 9 4142290 4150146

Neighbor

gene id symbol gene type direction distance location
gpr155a gpr155,LOC107657393,LOC107600701,LOC107671327 coding downstream 2170 4127366 ~ 4140120 (-)
cir1 cir1,LOC102235890 coding downstream 22247 4074035 ~ 4120043 (-)
sp3a LOC107742953,LOC107718453,LOC107671312 coding downstream 103833 4029462 ~ 4038457 (-)
cln5 LOC107749021,LOC107664004,LOC107549926,LOC107670900,LOC107728242,LOC107549738 coding downstream 387626 3750722 ~ 3754664 (-)
scel scel,LOC107749035,LOC107670903,LOC107663996,LOC107713739 coding downstream 504702 3627501 ~ 3637588 (-)
chn1 chn1,LOC107742958,LOC107739458,LOC105007244 coding upstream 8621 4158860 ~ 4196267 (-)
atf2 atf2,LOC107671311,LOC107739459,LOC107657392,LOC107742976,LOC107600703 coding upstream 47678 4197917 ~ 4218494 (-)
atp5mc3a atp5g3a,atp5g3,LOC108424356,LOC107739460,LOC108266717 coding upstream 68657 4218896 ~ 4222267 (-)
lnpa lnpk,lnpa,LOC107742983,LOC107657390,LOC107725829,LOC107600748,LOC107671324,LOC107588227 coding upstream 201463 4351702 ~ 4361969 (-)
evx2 evx2,evx2a,LOC107657379,LOC107671304 coding upstream 216921 4367160 ~ 4371591 (-)
G67605 NA non-coding downstream 95577 4046486 ~ 4046713 (-)
LOC122351402 NA non-coding downstream 118896 3989592 ~ 4023394 (-)
G67597 zak,LOC107657350,LOC107718456,LOC107600726,LOC107671274,LOC107742952,LOC107588248 non-coding downstream 161100 3979275 ~ 3981190 (-)
G67581 NA non-coding downstream 195385 3945319 ~ 3946905 (-)
G67537 NA non-coding downstream 312647 3829018 ~ 3829643 (-)
G67710 NA non-coding upstream 273738 4423977 ~ 4424298 (-)
G67712 NA non-coding upstream 277049 4427288 ~ 4427646 (-)
G67733 NA non-coding upstream 400998 4551237 ~ 4551875 (-)
G67730 NA non-coding upstream 402185 4552424 ~ 4555750 (-)
G67747 NA non-coding upstream 485771 4636010 ~ 4636342 (-)
G67668 NA other downstream 20187 4120463 ~ 4122103 (-)
dgkh dgkh,LOC107713732,LOC107549907 other downstream 634998 3437756 ~ 3507292 (-)
G67358 gpx4a other downstream 947798 3189847 ~ 3194492 (-)
serp2 NA other downstream 1096983 3017043 ~ 3045307 (-)
LOC122352064 galnt13,galnt1,LOC107671291,LOC107566748,LOC106586166,LOC107657719,LOC107687813,LOC107723435,LOC107706221,LOC107593713 other downstream 1303336 2807924 ~ 2838954 (-)
pde11a pde11a,LOC107657382,LOC107671328 other upstream 465603 4615842 ~ 4666654 (-)
LOC122351499 LOC107670334,LOC107747232 other upstream 642185 4792424 ~ 4822965 (-)
LOC122351456 LOC107747234,LOC107560802,LOC107670305,LOC107752600,LOC107689492,LOC107549748,LOC101883674 other upstream 706411 4856650 ~ 4973955 (-)
G67863 farp1,LOC107747234,LOC107670305,LOC107689492,LOC107752600,LOC107549748,LOC101883674 other upstream 809478 4959717 ~ 4983747 (-)
dbi dbi,LOC107560815,LOC107747240,LOC107752581 other upstream 860274 5010513 ~ 5014813 (-)

Expression


Co-expression Network