CI01000000_00050357_00064104


Basic Information

Item Value
gene id CI01000000_00050357_00064104
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 49997 ~ 64310 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000000_00050357_00064104.mRNA
GTATATACATCGGTGGACATTTCTCACTTTCACATTGAGACTTTCAGCATGCTACTAGGTCTCTTAAGGACAGTTTTAGGATATGGTGCAAACGGACTCCACGCTTTTAACAGCTTAAGTTATTCTAGTTTCATTGTGTTGTTTTAAGTTCAATGTGGAAATTGTAAGTACACTTTATTTATTCACTTTATTTCTGTTGTTTGTCTCATCTTTTTAAACACTCTTAACCATTCACACAGTATAATCTGACCCCATTTTAATTCATGTAAACTCGACCGATGGGGCCGAACGTTACATATGGTGGCCCGTACGGGGAACATTTAAAGACGTTTTATGCTGTGTTGAGAAGAGTGTTTTAAGATGACGACAAAACAAGTTAATGCTGCTTCTTTTAATACATCTGCTGGTTTTAATGATGAATGGGTTTTACATCATTGTGAATGTGTACAGCTTCGTGCTGAGGTGGTTGCTCTTAAAAACATTGTTTTAAAACTGGAGAAGGATTTTAATGACTCTGTTGAAAGTAATCTTAACCGTGAAGTGTATTTTAGAGAGGCTGTGAATTTTAAATTTGACAAAATGGAGGAATCTATAAAGGATGCCATGGCTACACTGGAGAGAAAGACAACCAACAGAGCGACCGATGGAGAATTCTGCGCCCCCACTACAACTGGGCCAGACTTCGACATCATCTTCTCCATCCTTCCCTTCTCCAGACAGCAACTCATCAGTGGACAGGGTGATGACGACACTCTCCAGAGACTTTCCATCTCTCCCTCCACTCCACCGACCAATGGGATTGACGTGCGGAACCACCAAGGTGTGCTGTATCGGTGGATCCAGAAGGGGAACAACAACATTAAGATCCAGCTCATCATTCCGAGGGCCCTGATCCAGCAGACGGTGCAGCACTTCCATCAGAGGACAGCAGAGCGACGACATGGGCAGCTGAAGACCCTACTGCAGGTCCTGGAAGTTGCCTGGTGGCCCACGATCCGCAGTGACGTCTGGAGATTCATCGGCGACTGCAAGTTGTGTGGTGTGGAGACCAAGGAGTGTGCAGTCATCAACCCTAGCAGCAAACCACCTCACAATCAACATCATCACGTTCATCATCAACATCACCCACCAAAGAGACCCACAAGCCGGATAGGAGGAAATGCCAGGGGGAGTGGCGTGCCAGGAAGGCTGGATGCTACAGGACCTTGGGAGGAATGGCATCACCGACCCAAGGACATCCAGGCTGGTGGTTATGATGATCTTGCTCAGACTTTGAGTACACTACAATTAGAGGTGGACAAAGTACACAACTTCCTTAAGACTATGGGTGCAGCCCAAGAAGAAAATGAAGTTCTGATGATCTTCTTATTCAGCAAGGACCTGATCTCCTGGTCAACGAAGGCGTGTTTTTCTTGTGACACACGGGGCAAAGTCAGAGTTTTAAAGTTGGACTCACTTGTCATAGGTTGTATAATGCGGGTTGAAGAAGGATTTGACTTGGGTGAGAATCTCATTCTTTACTGGGTTTCGGCATTAACCTGGCTCCAATACTGCTTCGCTTCTTCAAAATCTCAGTTTGTGTTCCAGTTCTCACCAACCCACTCACTTCCTTCACAGTTCCTCTCAGTAAACTTGCAAGTCTGGGATTATAATTTCTCAAAATGGCCTGAACAAATGTCTTACTCCATCTCTTTCTGTGTGTTCTACGAAGGAGACAGGATCATCAGAATCAAATTGAGGAAATTCAGCTTTTACAGGTGGATGATAAAATACATCATTCACATTGTCTGGTACATTTCACTGAAAGTGTTTATGAGATCTTTTATTGGAGGTGGGTCTCTTCTAGTCACAAAAGGACCAGCTTTGAAATCGGCAGGGGGTTCATACTCATCCTCTGCACCACGCAATGATATTGACATTTCTATAACACAGGGTACACATTAAACAAAACACAAACACCACACAGACCTTTCACTTCAATATGCAACGTAAGTGTCCCCGTACCGGCCACCAATCTATAACCGTCCCAGTTACTTTGCACTGGTCAAGCTACAAGAGTTCAAAGGGGAGAGGGGAAAAAAAAAAAAAAAAAAAAAAAATCGCCTTTTGTGCAAATACTTAAATTGATCTAAGGTGAAGGAGATCTATTA
>TU17
ATCTCTGGTACGTGCCAGCCATATCTAGAAATTGTTGCACTTCCTTCAGAGACTTCAGCACAGGGAAATTGTTAACAGCATTGATTTTGTATTAATAAGTCTATATTCCTTCAACTGAAATCACATCAAGAAATTTCAATGACTTCTGCATCAAGTTGCACTTTTGAAGATTCAAAGTTAAGCCCACCTAGTGAAAACATTCAAACACTTGTCTCAGGTGGTTATGATGATCTTGCTCAGACTTTGAGTACACTACAATTAGAGGTGGACAAAGTACACAACTTCCTTAAGTGAAAGTACAGATACTACTGGTCAAATATTACTCCATTACGAGTAGAAGTTGTAAAGACTGATTTTTATTAAAAACAAGTACTTATGTACTTTTACTTAAAAGTATCAAATGTGAAAAGCAAACGTCAATGCATTGTTTTATTATTGTTGCATTGTTGTATGTAATAGGCCTACTTACAATACCTTATGCCTCTGAAGCCACCTAGTGAATACACTGACCATTTTGTAGTATCTGTGGAATTAAGAGCTTTTAGAATGTTACAAAACCTATAGAAATTGAACAACTGGTTTAAATTTAAACAAATTTTGAATAACTCTAAAATATCTGTTTACTGTTGGAGATTTGTCTTTTGTTGCATTGCGCCACTCGTGTCCAGTGCAGAGTCAGTTAACACGCAAAAACGTAGTCTAACATCATTACCAATGCGTTAGCGGTGTCTGCAAAGCTATGGCAACTAGGCGGGCAAATACATAAATTATTTGCCTGACCATACTTCATACTGAAACTTAAGCTCTAAAAGCACTGGCAATATCCATTTCAAGCTTTTACCAGAAATTAAAAGTAGATTTACCTCAATATGCTTCCACAGGTTGGATGGAGAGTTTTTGTACGCTGTGATGTGGTTTGTTTTCGGTAAACAAAGCAAACATTTAAAATGAAAATAGTATGTTCCAGTTTTTAGAAAGGAGTAAAAATTAAGTATGGCCATGGATGCGCGCACTGCACCGAGGATCCGTCTTCGTCCATTTTGCCGCCAGTTGATTAGTGTTCAAAAAAAATTGATGGGAAATTGCCGAACTTCACGACACGTGACCCTACTAGAGTGATTACTGATTGGTTTTTTGCAGATGACAGACAGCCTATCACGTTTTAGAGAAGAAGAAAAATCATCCCCTGACTAATGTAATTACTTTCTACTCAAGGACCTTGACAGAAATGTAGTGGAGTAAAAAGTACGATTAGTTAAAGTAACAAGTTTCCAGAATAAATAATACTCAAGTAAAGTACAGATACTCAAAAAGTGTACATAAGTACAGTACTCAAGTAAATGTACTTCATTACTGTCCACAATATCATCAATGTACACTAAACAACTTTTTCAATATACAACAATGTACTGAAAACTGCAGCTCCATGCACAGACTCAAGATATAATGGATCTGAGGCACGGGATATCCATCCAGATACGTCTTTGCATTTAGACCTCTGAAATCAATACAAAATCTTTGTCCACCTCCCTTCTTTGTCTCTAGGACTATGGGTGCAGCCCAAGAAGAAAATGAAGTTCTGATGATCTTCTTATTCAGCAAGGACCTGATCTCCTGGTCAACGAAGGCGTGTTTTTCTTGTGACACACGGTAAGGCAATGATAAGTGACAGCAATGTATCTGTAGCAGGAGGGGCCAAGAATGAAAATGTTTCTTCTTGATAATAAGTGGTAGCAGGTAAAGTATACAGAGCATTGCCAATATCCAAATTAATTCTAGTGGCTACCAGTAAATCCATACATAGCACCATGGGTACTGTGGCATCATCATGTTTCAATACAAACAGTTCAACTTCATACCTTCTTCCTTGTAGCTCACATTCACAATTCCATACTCCCATAGCAGGTAATATTTGACCATCCGCTTGCTTGAAAGTTTACCCACGGCTTGATTTTAGCTGTTCTTTATGTCCCAGCTGTCTCCAACTTGACTCCTGTATCAGAGTTTGTGAGTTTCCACTATCGACTAGAGCTTGAAAGTATCTTCCTCTGACTAACAGGGGCAAAGTCAGAGTTTTAAAGTTGGACTCACTTGTCATAGGTTGTATAATGCGGGTTGAAGAAGGATTTGACTTGGGTGAGAATCTCATTCTTTACTGGGTTTCGGCATTAACCTGGCTCCAATACTGCTTCGCTTCTTCAAAATCTCAGTTTGTGTTCCAGTTCT

Function

NR:

description
hypothetical protein cypCar_00015593

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000000_00050357_00064104.mRNA False 2150 mRNA 0.44 7 49997 64310
TU17 True 2226 lncRNA 0.38 2 60756 63188

Neighbor

gene id symbol gene type direction distance location
CI01000000_00084533_00088200 NA coding downstream 19976 84286 ~ 89204 (+)
CI01000000_00108218_00111090 NA coding downstream 43652 107962 ~ 111210 (+)
CI01000000_00112199_00115163 NA coding downstream 47219 111529 ~ 115356 (+)
CI01000000_00119500_00121099 NA coding downstream 54239 118549 ~ 121314 (+)
CI01000000_00121669_00123027 NA coding downstream 57281 121591 ~ 123179 (+)
G19 NA non-coding upstream 22363 26692 ~ 27634 (+)
G20 NA non-coding upstream 23632 26092 ~ 26365 (+)
G18 NA non-coding upstream 24326 25075 ~ 25671 (+)
G14 NA non-coding upstream 25422 24122 ~ 24575 (+)
G13 NA non-coding upstream 26613 22563 ~ 23384 (+)
G72 NA non-coding downstream 79559 143869 ~ 144150 (+)
G73 NA non-coding downstream 80086 144396 ~ 144612 (+)
G74 NA non-coding downstream 80530 144840 ~ 145103 (+)
G81 NA non-coding downstream 86406 150716 ~ 151207 (+)
G87 NA non-coding downstream 100842 165152 ~ 165353 (+)
G252 NA other downstream 438899 503209 ~ 507072 (+)
G350 NA other downstream 607532 671842 ~ 676937 (+)
G435 NA other downstream 1360811 1425121 ~ 1432854 (+)
G579 NA other downstream 1751143 1767917 ~ 1908808 (+)
G2774 NA other downstream 4389468 4453778 ~ 4454232 (+)

Expression


Co-expression Network