LOC122351456 (LOC107747234,LOC107560802,LOC107670305,LOC107752600,LOC107689492,LOC107549748,LOC101883674)


Basic Information

Item Value
gene id LOC122351456
gene name LOC107747234,LOC107560802,LOC107670305,LOC107752600,LOC107689492,LOC107549748,LOC101883674
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 4856650 ~ 4973955 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU100372
GATCTTTGTGGATCTCGAACGTCTTTGCCTCGAAACGGCAACAGTTCGGGAAACACTCCGAACCGCGGCAACACGACGGCCCACGTGTGCTGGCACCGCAACACCAGTGTTTCCATGCTGGACTTCAACACGGCCATCGAGAACCAGCTCTCAGGAAATCTGCTCCGGAAGTTTAAAAACAGCAACGGCTGGCAGAAACTCTGGGTGGTCTTCACCAACTTCACCCTGTTCTTCTACAAAACACACGAgGACGAGTATCCTCTGGCCAGTCTGCCTCTGTTGGGTTACTCAGTGACTCATGCAGGAGAATCTGAAAACATCCACAAAGAGCACGTCTTCAAACTGCACTTCAAATCTCATATCTACTACTTCAGAACGGAGAGTGAATACTTTTTCGACAGATGGATGGCGGTGATCAGAAGTGCCACGGTCTCTGCCAGCAGAACCCGTTATCTGAACCGGACAGAACCGGACTGAACCCCGGAGAACCCGGCATCTGAACCGGACAGACAAAAACACGAACCAACAGACCCACGCAGGCATATAGGGAGCAACcatctccgtgtgtgtgtgtgtgtgtgtttgtgtgctttt
>XM_043248536.1
GCCGGCAGACATGGCGACTGCGAGGACGCTCGTCTGCTCCGCGACAGGCTGCGTCTGAAGCGGCTCCGCAGCATCGCCGTCGCGCCCGGCGCACTCGCGGACGAACGCGCACTTGCACGCGGCGGATTTATAACCGGGGCTGAGCCGGGAAGACCATGGCGGAACGGGGCCAAGCGTCTCTGGCGGGACAGAGGTTAGGGGCTCCGGAGACTCTGGGGATCAGCACCCTGGAGCCCGGGCACAAACCGCCCGCCATGCCGTCTGGACGCCCGGTGCCCGTCAGAGTCGTGCTGCTGGATGACTCCGAGGAGATTTTTGAAATATCGCATCGAGCATCGGGCCGGGTTCTGTTCGAGATGGTCTGCTTGCATCTGAACCTCATTGAGGGGGATTACTTTGGCCTGGAGTTCCAGAGCCATCACAGAAAGATGGTTTGGTTGGATTTACTAAAGCCCATTAGAAAGCAGATCACACggCCCAAGCACACCGTCCTTCGGTTTGTTGTGAAGTTCTTCCCCCCTGATCACTCGCTGCTGCTGGAGGAGCTGACCAGGTACTTGTTTGCGCTGCAGGTGAGGCAGGATCTGGCGAGCGGACGTCTCACGTGCAGCGACGCCAGCGCTGCTCTTCTGGTCTCTCATATCATCCAGTctgaGATTGGGGATTTTGAGGAAACTCAGTGTAGACAGCATCTACTAAACACCAACTACATCCCTGACCAGATGGCCCTGATGGACAAAATCATGGAGTTCCACCATAAACACATtggACAGACACCAGCAGAGTCAGATTACCGGTTGCTGGAGGTGGCTTGCAGGTTGGAGATATACGGCATCCGACTTCATCCGGCTAAAGACAGAGAAGGAACCAAACTCAGCCTGGCTGTAGCACACGGCGGCATGTCTTTTAATCAGGGACACAACAGAATCAACAACTTCAACTGGTCTAAAATCCATAAGCTGAGTTTCAAGAGGAGGAGGTTCCTTATCAAGCTGAGAGCAGACCCTAGTAATGTCAATCAGGATACTCTGGAGTTTCTGATGGCGAGTCGGGACTGCTGTAAAATGTTCTGGAAGATCTGTGTGGAGTATCACGCCTTCTTCAGGCTCTTTGAGGAGCCCAGACCCAAACTCAAACCCGGTGCTGTTCAGCAGGGCTCTTCCTTCAGGTTCAGcGGTCGGACACAGAAGCAGGTGATAGATTATGTGAAGGAAAACGAGTTTAAGCTGCCCTTTGATAGGAAACACAGTCGAGTGCAGTACAACAGCAGTCTTTCACCTCTGCGTTCTGTGCCAAATCAAGCTATCAAGCAGAGCTGGGAGGGCTCATTTTTAGTAAGCTCAGAAGATTCTGCGGTAATAAGACCATGTGGAAACTCCTCCCCATCGACTCAGCGCAATGGATGCAGTGACCAAACGTACCCCATTCAGGAGGACCGCAGAAGCCCGGCCGCTAAGCAGCAGCCCGTCGATCGAGCAGGTCTGGCGTCCCGCGCAGCTAAAGGCAGCAGCTCATCCATCCCGTACATTGACTGCAGCGATGCAGAGTTTAGCGAACAGGAAGTCAGAGGTCGGGTCAGCAGGTCACACTCGCACACGCGCGATGGCAACAGTGACAGCGCTTATGGCACTGGCTTTGGTTTGCCCCGGTCACACCAGCAGGACAGATACTTGGGCAAGTTCAGGCAGAGAGAGTCTCCGCCTCTTTCCCCTGTAAGCCAAGCCACGAGCCCCGCCCACAGCTACCCGAGCCCCTCCTCACCAAATCAAAATGCTAACATTTTCGAGTCGCCGTTTTTTGGAGGCAGGGTACGCGGGCCGCTTCATAGCACACTATTGGAAGAGTTGGCCGCAAAAAGCTCCTTAAACCATCAGAAAGGCACCCGAAGCCTGACTTCTAGTCCCGCCCCCTCCTCAATTCACAGGACAAGCTCGCTAAGCTACGCCCAGTATAATGGACACACCGGGCGGAGCCTTAGTTCAAAAGCAGGACGTGAGGAAAGAGGGGGACTGTTTAGTAGCTGTTCCCCAATTATGAACCGTTCAGCAAACAAGTCCGTTAACAACACCGTTAGCCAGTTAGAAAGAAACATGCGTGTCTCAAATCAGCCACACACTCCCGTTCTCTCCCGTGCCGAGAGAATGGCCATGTTGGAGCGCCGAATGCTGGCAAATGGGCTTGCGCCTCCTGGCAAGGCCAATCTCAAACCAAGCTCGCCACACCGGCGCTTTGGGGCTGTGCAGATGATTGATGGCTCCACCAGTAGTGGAACAGACACTAGCGACTCAGAAGAGGCAGAGTCTACTGGCTCCTGCAGCCAATCGCTGGGCTTTGAAAACCAAGCCGCTCAGAGTTCCCCCAGAAACAAGTACTCATTCGGAAGCTTGCAGCTAGATGAAATCGACGATGAAGGAGGGTGTGTGGACCTTAGTGATGAGGAAGGGATaacTGTCCCGCTGATACCGCTTTACTGCATAGCTAAAGAGCTGCTGTGTACTGAGAGGACATACCTGAAGGACCTGGAGCTGATCACAGTGtggtTTCAGGGGGTGCTGGACAAAGAGGATTGTGTTCCTGGCCTGAAGACACTGTTGAGTTCCACGTACGAGCCGCTTCATTCCCACCACACACACTTCCTCcaggagctggaggagagaCTGTCACTGTGGGAAGGCCGATGCAGTACGGAGGTTAAAGAAGAAATGCAGCATGTAGGAGACCTGCTGCTGAAGAGCGCACAGGAGCTGAAGGCTCTCTCAGCTCAGCTGCAGACGATCTCAGAGTGCGTGTTTGCGCTGGAGAGAGCGTGCGTCGCGTCCCGCAGGCTGGAGAGCGCGTGCCGTGAGTTTGAGCTGCAGAAGGTGTGTTACATTCCTCTGAACGTCTTTCTGCTGAGTCCTCACCGCCTGCTGCACTACAGACAGATGCTGGGCAGGCTCTGCAAACACTACCCGCCGACACACTCCGACTACGGCGACTGCTCAGCTGCTTTGGGCGAGGTGAGTGAGCTGGAGGCTGCTCTTCGTCCTGGTCTGGAGGAGATGGAGAACTATCAGAAGCTCCTGGAGCTCCAGAAGGATGTGGTCGGTGTGGAGCGTCTGGCCGTGTCTGGACGTCAGCTCATCAGGCTCGGCTGTCTCAGCAAACTCTCTGGGAAAGGCCTTCAACAGCGCATGTTCTTCCTGTTCAGTGACGTGGTGTTGTACAGCACCCGAGGGATAACGTCGACCAATCAGTTCACAGTGCACAGGCAACTTCCTCTGCGCGGCATGACAatccGAGAGAGTGAGGACGAGTGGGGCGTCCCGCACTCCTTCACACTGATGGTGCAGCAGCAGTCACTGGTGGTCGCCGCATGTTCAGAGTCAGAAATGGAGAAATGGATGGAGGATTTAAAGATGGCGGTGGACATGGCCGAAGAGTCTAACggactgacctctgacctgctGGCTGCTAGCAAGGATGTCAAATCCTCAGGGCGTCCGAAGGAGTCAGAGGATGATCTTTGTGGATCTCGAACGTCTTTGCCTCGAAACGGCAACAGTTCGGGAAACACTCCGAACCGCGGCAACACGACGGCCCACGTGTGCTGGCACCGCAACACCAGTGTTTCCATGCTGGACTTCAACACGGCCATCGAGAACCAGCTCTCAGGAAATCTGCTCCGGAAGTTTAAAAACAGCAACGGCTGGCAGAAACTCTGGGTGGTCTTCACCAACTTCACCCTGTTCTTCTACAAAACACACGAgGACGAGTATCCTCTGGCCAGTCTGCCTCTGTTGGGTTACTCAGTGACTCATGCAGGAGAATCTGAAAACATCCACAAAGAGCACGTCTTCAAACTGCACTTCAAATCTCATATCTACTACTTCAGAACGGAGAGTGAATACTTTTTCGACAGATGGATGGCGGTGATCAGAAGTGCCACGGTCTCTGCCAGCAGAACCCGTTATCTGAACCGGACAGAACCGGACTGAACCCCGGAGAACCCGGCATCTGAACCGGACAGACAAAAACACGAACCAACAGACCCACGCAGGCATATAGGGAGCAACcatctccgtgtgtgtgtgtgtgtgtgtgtcttttatgACAACGTCACTTTTTTTGTGAccgacttttttttaatagcattgTTTCATAGTACGACATTAAAAGGGAATGTCGCCGTTTCGCTTCTGAgccttttaatagttttaatgatCAGCCACGgacgttttttttctcccttatCTGTATTCTCACCGATTTTCTTGCATGTAAGGCGCTGAGATTTAATGAGTGAAGCGGTGAATGCCAAAAGGTCAAGTACAGAGGTCACCGCCGAGATAAAAGGTGCTGACGAAAATCCTTATCGAGATATTCACAAAAGAACTGCATTACGTTTCATAAAACGGCCTCGGACGTGCTTCACAGCATTATCTTGAGAAAACAAAGGCTCAGAGATGAAGACCGGTGGAATTCCCCTTTAAACTCACGCCATtccccacaaacacacaggtgCTTTTTAAAGCTCGCGTTTTTGTCCTCTGGTGTAACcaacgaaaaaaaaacatttcctgcatttttttaactggGCTTTTACAGAACCtctttttgtaaatgataaGCAAGTGTAAAGCCGTCACTTGTTGCCTTTGAAAGGAGGCGGATCCATTTCAGTGCCATGGTTTTTATAGTACGGGTTTCTATGTTTTAGACTTTGTTTCTATCAGCTGACGCCACGCTGGGTTCCAGAAGCCAATGTGCCAAAACCACGACGGTGACTTCTGTCCGTTTCCATTCTGGACTGACTATATCGTGGGAGCATCGAGAATTAGGGATTTATCACGTGCCATAACGCGCAAAAGGTCACTTAGGTAACGTTtgatgaggttttttttttgttatttaaggTCGCTGTCGTTTTAGGGGTATCGTCTTCACCCAGCTAAGAAACCGTAAGCGGCTCGGGATGAACCGCGGCTGAACGTCAAGaagaaaagctttaaaatgtgcGGATCAACGTGATGTTTTAGCTTCAGCGCGGCCCGGACGCTGCTGAGACGAACGGGAAAAGACGAGGAGAGTTCGTTGGAATCGAAAGCAATAAAAACCTGGTTCCAGAAAG

Function

NR:

description
PREDICTED: FERM, RhoGEF and pleckstrin domain-containing protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU100372 False 594 TUCP 0.52 5 4856650 4945665
XM_043248536.1 True 5110 mRNA 0.52 29 4939985 4973955

Neighbor

gene id symbol gene type direction distance location
casp10 LOC107560797,LOC107561720 coding downstream 64911 4781700 ~ 4791739 (-)
prkra LOC107747227,LOC107670311,LOC107560808,LOC107561731,LOC107689486 coding downstream 75973 4774995 ~ 4780677 (-)
nfe2l2a nfe2l2a,LOC107716922,LOC107725823,LOC107671308,LOC107657385 coding downstream 285534 4557126 ~ 4571116 (-)
evx2 evx2,evx2a,LOC107657379,LOC107671304 coding downstream 485059 4367160 ~ 4371591 (-)
lnpa lnpk,lnpa,LOC107742983,LOC107657390,LOC107725829,LOC107600748,LOC107671324,LOC107588227 coding downstream 494681 4351702 ~ 4361969 (-)
LOC122351620 rap2a,LOC100332969,LOC103043765,LOC107549783,LOC103391592,LOC105907999,LOC106512668,LOC106582448 coding upstream 3704 4977659 ~ 4985596 (-)
tmem37 tmem37,LOC107752614,LOC107689494,LOC107747239,LOC107670320,LOC107560813 coding upstream 34230 5008185 ~ 5009514 (-)
steap3 steap3,LOC107689493,LOC107747243,LOC107549780,LOC107752579 coding upstream 43113 5017068 ~ 5022355 (-)
insig2 insig2,LOC107549777,LOC107689500,LOC107720943,LOC107670326,LOC107549914,LOC107752584 coding upstream 148252 5122207 ~ 5128098 (-)
ybey ybey,LOC107670327,LOC107720944,LOC107689501,LOC107752586 coding upstream 164159 5138114 ~ 5139999 (-)
G67747 NA non-coding downstream 220308 4636010 ~ 4636342 (-)
G67730 NA non-coding downstream 300900 4552424 ~ 4555750 (-)
G67733 NA non-coding downstream 304775 4551237 ~ 4551875 (-)
G67712 NA non-coding downstream 429004 4427288 ~ 4427646 (-)
G67710 NA non-coding downstream 432352 4423977 ~ 4424298 (-)
G67904 NA non-coding upstream 31339 5005294 ~ 5006781 (-)
G67911 NA non-coding upstream 53089 5027044 ~ 5027597 (-)
G67913 NA non-coding upstream 76474 5050429 ~ 5051292 (-)
G67923 NA non-coding upstream 115227 5089182 ~ 5089393 (-)
G67928 NA non-coding upstream 125951 5099906 ~ 5100777 (-)
LOC122351499 LOC107670334,LOC107747232 other downstream 33685 4792424 ~ 4822965 (-)
pde11a pde11a,LOC107657382,LOC107671328 other downstream 189996 4615842 ~ 4666654 (-)
wipf1a LOC107657348,LOC107600727 other downstream 706411 4142290 ~ 4150239 (-)
G67668 NA other downstream 734547 4120463 ~ 4122103 (-)
dgkh dgkh,LOC107713732,LOC107549907 other downstream 1349358 3437756 ~ 3507292 (-)
dbi dbi,LOC107560815,LOC107747240,LOC107752581 other upstream 36558 5010513 ~ 5014813 (-)
G67912 NA other upstream 54971 5028926 ~ 5029475 (-)
G67930 LOC107670337 other upstream 131939 5105894 ~ 5108387 (-)
LOC122351925 NA other upstream 376000 5349955 ~ 5369589 (-)
LOC122351915 LOC108191338,LOC101883771,LOC101885620 other upstream 422910 5396865 ~ 5399880 (-)

Expression


Co-expression Network