CI01000000_00108218_00111090


Basic Information

Item Value
gene id CI01000000_00108218_00111090
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 107962 ~ 111210 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000000_00108218_00111090.mRNA
TTATATAAGTCACGAATCCCCCATACGTTAAGAGAAAAACAAGACAATTTAATTGACATTATTGGGAAAATGTATTGATCACTGAAGGCCATACAAAAGGTAAGCAATTTGCTTATATTTGTTTTATGTGGCCCCTTGTGAGCTAATGCCTGGGTGGTAACTGCCTGAAAAGATCTCAGCAAAACGAACCTAAATTAAAAACAGAATTAAAAATTAGGAAATGAATCTAAATGATTAAATTTTCTCTCAGGTCAAGATGGCTGCAGGTGGGACAGGTGTGGTCCAAGCTCTTTTACTATACACTCTGTTTGTTGTTTTTTTACCATCTAAAGTTGATTTAGACCTCAAATATGCTGGCAACAGGCAACAACTTTTCTTCTATGAAAAAAAGTATTTCAGCAGTATGGGTCTACTTTATAAACAAACAAACAATGACCCTAAGCCAAGTATTGGCTATGGGAAACACCTTCTGGTTATGACGTTCATTTATCCTTCTTTATACAAACAAATACGGAAAAAAAACAAGACAACTTCACACCTACATTGGACTAATGCACTGATCATTACAATCTGTTTGATATTGTCTGGAGACATACATCCATGCCCAGGACAGCACCGCGTTACACCGGAGGAGAGGCCTGTGGAAGAGCGCGCTACTACATTCCTTCAGGTATGCCCATTGTATGATGCATTACAGTGTAGTCCTGTACATTCTAACCTTTCCTGTCCGTCGTCTTCGCTTGGAGCTGCCGTGGATGGGACATTGGGAGGCCGTGCTGGTGCTGTGGCAGAGGTGGTGGATCGGCGTGCACGGCGTGCACGGGATTCTCGTGCTGGTGTTGGCGTTGGTGGAGTGCCTAACATATACGCTCCTCCAATAGACACAAGTCAATCAGTTTTCTGTTTAATAAGCATCACAGAATCAGAGGCATCACAGACCATTAAATCACTTAGACCATCTAGTTGTAAAGATATTTTTGGTATGGATACAGTGATGCTCAAGGAGCTTAATACAACAGTCACACACCCCATTACCAAAATTATCAATTTGTCCATTTTACAAAATATGTTCCCAAGCGTGTGGAAATCAGCTGTTATTGTTCCCATTTTCAAAAGTGGAGACCCTCATTCCGTGTCAAACTACAGACCCATCAGTATATTACCCACTGTGTCTAAGATTGCAGAGAAACTGATAGTAAAACAAATTATTAACCATCTAAATACCACACCCTATGCTCTCCACTCTATGCAGTTTGGCTTTAGAGCCAATTATTCCACCGAAACTGCTACTTGCTTTTTTACTGAAAACATCAGAGCTTTGTTGGATCGAGGTGGGGTTGTTGGAGCTGTGTTTCTGGATCTCAAGAAGGCTTTTGACACTGTCAATCATAAAGTCTTGCTGAAAATTATGCAGTTTTAATTTTTCCTCACTGACCGTTCCCAACATGTCAGAGTCCAGTCATTTAAATCAGCGGCTCTCAGTCTGTCTACCGGTCTTCCTCAAGGATCAATTTTACGACCTTTGTTGTTCTCACTTTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000000_00108218_00111090.mRNA True 1540 mRNA 0.41 2 107962 111210

Neighbor

gene id symbol gene type direction distance location
CI01000000_00084533_00088200 NA coding upstream 18758 84286 ~ 89204 (+)
CI01000000_00050357_00064104 NA coding upstream 43652 49997 ~ 64310 (+)
CI01000000_00112199_00115163 NA coding downstream 319 111529 ~ 115356 (+)
CI01000000_00119500_00121099 NA coding downstream 7339 118549 ~ 121314 (+)
CI01000000_00121669_00123027 NA coding downstream 10381 121591 ~ 123179 (+)
CI01000000_00127682_00128077 NA coding downstream 12344 123554 ~ 128077 (+)
CI01000000_00252240_00259416 SPON2B, SPON2 coding downstream 141030 252240 ~ 259848 (+)
G19 NA non-coding upstream 80328 26692 ~ 27634 (+)
G20 NA non-coding upstream 81597 26092 ~ 26365 (+)
G18 NA non-coding upstream 82291 25075 ~ 25671 (+)
G14 NA non-coding upstream 83387 24122 ~ 24575 (+)
G72 NA non-coding downstream 32659 143869 ~ 144150 (+)
G73 NA non-coding downstream 33186 144396 ~ 144612 (+)
G74 NA non-coding downstream 33630 144840 ~ 145103 (+)
G81 NA non-coding downstream 39506 150716 ~ 151207 (+)
G87 NA non-coding downstream 53942 165152 ~ 165353 (+)
G252 NA other downstream 391999 503209 ~ 507072 (+)
G350 NA other downstream 560632 671842 ~ 676937 (+)
G435 NA other downstream 1313911 1425121 ~ 1432854 (+)
G579 NA other downstream 1704243 1767917 ~ 1908808 (+)
G2774 NA other downstream 4342568 4453778 ~ 4454232 (+)

Expression


Co-expression Network