CI01000000_00112199_00115163


Basic Information

Item Value
gene id CI01000000_00112199_00115163
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 111529 ~ 115356 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000000_00112199_00115163.mRNA
GTAAAAAAGGCCTGTAATCGAATCAAATTCAACCTCAGTAACTTTAGACACATTCGCCATCAAATGTCTACACAGGCAGCAAAAATGTATACACACTCTATGATTTTTTCACATATCACTTACTGTTTACCTATTTGGTCACAAGCTAGTGTTACATCTCTGAAACCTCTGCAATCACTTTACAAACGAACTGTAAAAATTCTAGATAAGAAACTGAGCATTTCTCATTATTGTCCAATATTACAAAAATACAAATTACTCAGCTGGGAAAACATGGTATAATTCTCAAATCTATGTCTTGTTTATAAAATTATTCATGGTTTATCATCCCCTTCCCTCCATCAGTTTGTCAACATCCGAACAGCTGATCATAGTAGAACCAGAGGTGCAGCGAGGGGAGATTGTATCATTCCCTTTAGGAAAAGTGTATTTGGCCAAACTTCTTTTTCTGTTCGAGTTGCTACTGAGTGGAACCTCACTCCCATAAACATCAGAAATCTGAACACATGATGTTTTATTAACAAAATTCTGGAGGAGCAGGTGCAGATAATTAGACTAATTATCACAAGTGGAAAGCATTAAGCTTATCAACCAACAGAGGTATATATACTGCAGACTTGCCTCTGTTCGTTGACAGTTTATCAGCATTTCGATTCGCCCTTCTGCTATTATGTCGCAAGTTAACATCTCTCTGTTCAACGACGAAATCAACTTCCCCGAGGATCCTGCGCCTCCACCTGCCGGCCCCTCGACAACTCCTCCTCCGCCTGACACCGCACCTGAGCCCCAGGCTTCCAGGCGCGGCCGACCGCCTGCCTGTGCAGCTACACGCTCGCCTAGACGCCAAGCTCAGCCCTCGCCTCCACTGGTGAGACCTCAGTATACCTCCCCGGCGTCCTCCTATCGTTCAGCCGTCCCAACGATTCCACCTATTGGGAAGTGGACAGTAGTGCACAAGGATGCTGGCAACTCAGGCAACTCAGGCTCAAACCTTTCATCAGTTCCCTCCGAACGTGCCCTTCTCAGTGGCAACCGTCAAATAGACTGCGGCGATTTCTCAGTCACCCTAAAAAACCCAAATCCACATTCATCTCGCCTGCTTTCTTTTTCTGAGTTTTCAATTGCTTTTTCTCGTTTTACCGAAATAATCTGTTCAGCTTTCCCCCATAGGCGGCGTGAACTGAATGATTATTTGGCAATCATAGCTGAGCTGGCGCTGTCCTATGGAGGCGGGCACTTCTACACTGCAAAATGTGCTGTGCAAGTCGCCCAGTGGAATCAGTGCCCTTACTGGGGTGCACTCGATGCCGATCTCCACAGCAGGGTGTTTTTAGGCTGCAGAAACATTTCGTGTGCCATATGCAGGTCAGTGGCTCATTCTACTATGACGTGCCCACAGATTAACCCTTCAATTCCCCCCTGCCCGGACACAACCCAAGTCAAATCCACCAGCTATGTGCCAAGACTGGCAACCTTGGCTAACGAAGATGTGAGAAGAGCCCCACCTCTCACAGACAGCAGGCAGCCCTGTAACAGTTTCAACACTGGGGGCTGCTTCAGACAGCGTTGCAGATATTTACACATCTGCAACTTTTGCGGCGGCGCTCATGCCCGTCACGCTTACCCGTCTGATGCTGTAATTATTGATCTCCCATCGGTCGCAGCGAGAGCCCTCCCGGTCAGCTTCCATCCTTTTATCCTTTCTCTGTCTGGCAAGGCTTACCTGTCCGACACAGCTTACCCATCCGAGGCCCTGAGCATTGGTCTCCCATCAGATGCTGCGAGAGCTCTCCTGGCTGGGCATTCCAATTCCATCCACCTCACTATTGACCAATACTTTTTTGCTTGGTCGGTCGTTCCGAAACTTTCGGTCGGTAGGGCTCACCCGTTCGACGCCGTGAGCCTTGGTCTCCCGTCGGACGTAACCAGAGCCCTCCCGATCGGGCGCTCAAAATCACGCGCTCCCCGTCAGTCGGCCGGTAGGGCCCGTCCATCCGGCGATGCACGATCCCGTCAGAGGCAGCAAATCATACTGCTCCTCATTTATCGGCCGGTAGGGCTTTACACATCTGATACAATGAGCATTGGTCTCCTGGAGCATTGGTCTCCTGGAGCATTGGTCTCCTGGAGCCTTGGTCTCCTATCGGACGTTGCGAGAGCCCTCCCGATCGGTCGTTCCAAATTTCAGCTACTCATCATTTGTCATGCTAGTAGGGCCCGTCCGCCTGGTACAGTGATACGCTCCTGTCAGTGGCAACACGGGCTCTCAAGTGACCAGGCTTCTTGAAATGACAGTCCGCCAATTCTCGGTGTCTTTTGGGGTCTTTAGTCTGGCGGCTGTCCTTTTTGCTCTTTTGCTTTTTGGGGGGAGTACTCTGGGCTCAGGCCAAAATTCCAAGCTCGGAGCCCTCCCCCTGGACAGCACGCCAAATACGCATTACTTTACTCTATCTAATTATATGTATATGTGAACTCGTGAA

Function

NR:

description
putative gag protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000000_00112199_00115163.mRNA True 2480 mRNA 0.49 3 111529 115356

Neighbor

gene id symbol gene type direction distance location
CI01000000_00108218_00111090 NA coding upstream 319 107962 ~ 111210 (+)
CI01000000_00084533_00088200 NA coding upstream 22325 84286 ~ 89204 (+)
CI01000000_00050357_00064104 NA coding upstream 47219 49997 ~ 64310 (+)
CI01000000_00119500_00121099 NA coding downstream 3193 118549 ~ 121314 (+)
CI01000000_00121669_00123027 NA coding downstream 6235 121591 ~ 123179 (+)
CI01000000_00127682_00128077 NA coding downstream 8198 123554 ~ 128077 (+)
CI01000000_00252240_00259416 SPON2B, SPON2 coding downstream 136884 252240 ~ 259848 (+)
CI01000000_00260299_00262433 NA coding downstream 144943 260299 ~ 263524 (+)
G19 NA non-coding upstream 83895 26692 ~ 27634 (+)
G20 NA non-coding upstream 85164 26092 ~ 26365 (+)
G18 NA non-coding upstream 85858 25075 ~ 25671 (+)
G14 NA non-coding upstream 86954 24122 ~ 24575 (+)
G72 NA non-coding downstream 28513 143869 ~ 144150 (+)
G73 NA non-coding downstream 29040 144396 ~ 144612 (+)
G74 NA non-coding downstream 29484 144840 ~ 145103 (+)
G81 NA non-coding downstream 35360 150716 ~ 151207 (+)
G87 NA non-coding downstream 49796 165152 ~ 165353 (+)
G252 NA other downstream 387853 503209 ~ 507072 (+)
G350 NA other downstream 556486 671842 ~ 676937 (+)
G435 NA other downstream 1309765 1425121 ~ 1432854 (+)
G579 NA other downstream 1700097 1767917 ~ 1908808 (+)
G2774 NA other downstream 4338422 4453778 ~ 4454232 (+)

Expression


Co-expression Network