G68055


Basic Information

Item Value
gene id G68055
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 5735337 ~ 5735783 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU100657
TTCTTAGCATTCAttctttagaaaatattttgagaatgtttattataaaaatataaatgtttccactacaaatcattttacattagtAGACAAGGCCATctacacacgcgcacacacacgcgcacacacacacacacacacacacacacacacacacacacacacacacactcacattaaTCTAAAGAAGGGGAACAGGACGCAAAACAGTATTGCTCTTCAAAACATCATcttaaacaaagtaaaatataaaaacactgatagGGTTGAAACGTGAACCATGTCATAACTTACTGAatgctacttaaaaaaaacaaaaaaaacaacggcACTGTGTATTGTGGTTTGttgttaagaaataaataataagtcattataattgtttttatgtaaagaaaaatataatacaaaataacataaaatatcataCAAATGAGTTTTGTAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU100657 True 447 lncRNA 0.30 1 5735337 5735783

Neighbor

gene id symbol gene type direction distance location
myo1b myo1b,LOC107748838,LOC107664008 coding downstream 214051 5463314 ~ 5521286 (-)
bzw1b bzw1b,LOC107689509,LOC107549769,LOC107752595,LOC108435180 coding downstream 340790 5391353 ~ 5394547 (-)
LOC122351922 NA coding downstream 386234 5346160 ~ 5349103 (-)
LOC122351913 LOC107670336,LOC107720941 coding downstream 394116 5323729 ~ 5341221 (-)
LOC122351912 LOC107670332,LOC107549921,LOC107689507,LOC107752589,LOC107549740 coding downstream 415750 5297506 ~ 5319587 (-)
LOC122351910 farp1,LOC107689492,LOC107747234 coding upstream 30547 5766330 ~ 5796149 (-)
LOC122351461 si:dkeyp-118h9.7,LOC107689504,LOC107549742,LOC107752607,LOC107549895,LOC107720938 coding upstream 137810 5873593 ~ 5874656 (-)
LOC122351462 LOC107549895,LOC107689504,LOC107720938,LOC107752607,LOC107549742 coding upstream 138886 5874669 ~ 5875367 (-)
LOC122351923 LOC107549895,LOC107549742,LOC107689504,LOC107752607,LOC107720938 coding upstream 139691 5875474 ~ 5876391 (-)
LOC122351906 LOC107670338,LOC107721263 coding upstream 153110 5888893 ~ 5899643 (-)
G68053 NA non-coding downstream 165 5734924 ~ 5735172 (-)
G68048 NA non-coding downstream 19700 5715341 ~ 5715637 (-)
G67917 NA non-coding downstream 553837 5141790 ~ 5181500 (-)
G67928 NA non-coding downstream 634560 5099906 ~ 5100777 (-)
G67923 NA non-coding downstream 645944 5089182 ~ 5089393 (-)
G68082 NA non-coding upstream 70157 5805940 ~ 5806327 (-)
G68120 dip2a non-coding upstream 309332 6045115 ~ 6047596 (-)
LOC122351301 NA non-coding upstream 382068 6117851 ~ 6142682 (-)
G68189 NA non-coding upstream 505539 6241322 ~ 6241602 (-)
G68265 NA non-coding upstream 944312 6680095 ~ 6683011 (-)
LOC122351915 LOC108191338,LOC101883771,LOC101885620 other downstream 335457 5396865 ~ 5399880 (-)
LOC122351925 NA other downstream 365748 5349955 ~ 5369589 (-)
G67930 LOC107670337 other downstream 626950 5105894 ~ 5108387 (-)
G67912 NA other downstream 705862 5028926 ~ 5029475 (-)
dbi dbi,LOC107560815,LOC107747240,LOC107752581 other downstream 720524 5010513 ~ 5014813 (-)
LOC122351463 LOC107689507,LOC107549921,LOC107670332,LOC107752589,LOC107549740 other upstream 177072 5912855 ~ 5931136 (-)
G68124 dip2a,LOC107549743,LOC107752588,LOC107720936 other upstream 307492 6043275 ~ 6043925 (-)
LOC122351979 NA other upstream 363288 6099071 ~ 6099912 (-)
G68188 irs2b,LOC107715923,LOC107688717,LOC107559513,LOC107557930,LOC107721603,LOC107702923 other upstream 511117 6246900 ~ 6261069 (-)
LOC122351350 cb064,LOC107688735,LOC107716767,LOC107676512,LOC108232354,LOC103042106,LOC105927538 other upstream 1335202 7070985 ~ 7153954 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) G1796224 NA non-coding NC_048586.1 CM023240.2 28394836 ~ 28400271 (-)
striped catfish (Pangasianodon hypophthalmus) G82961 NA non-coding NC_047599.1 CM018545.1 15371262 ~ 15374502 (-)