G68056


Basic Information

Item Value
gene id G68056
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 5746855 ~ 5764874 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU100659
GCATTTCAGAGTCCTGACATAAtgggttttattttcttttccagaAAGCTGTGGTCAGAGCTCCACCACTAAAACCGAGGTCCTGACCGCCTCCGACACGCTCTGCCGCAGCTCCGCCGCCGTGCCCGGTTTACCGAGCCCCCGGGTGAACTTTCGCGTCTCCGCGTGGCCCGCGACTGACATGTCGGGCCACAAACTCTCATTAACGTCCAGCAGAcgtgtgaataaataaattaaaaaaacattcaaagttTGTTCTCCGCCGTCCCGACCACCTCCGCGAGCGCCCGCGGTACAAAAACCCTTCCTGAAAGCCCTCCGCTCGCCCCGCCGTTAACTCTCATGTCCAGATGAACGCGCCGGATGCTTCGGTCCACGTTTCCAGGGCTTTAACGTCTCCAGAAAGCGTCGGCGGTCGCTTTCCCGTGCTGTCATGGTCTCGCGTCCG
>TU100660
CACCTGCAAGCCAGTCAGGGGCACCACTAAAACCGAGGTCCTGACCGCCTCCGACACGCTCTGCCGCAGCTCCGCCGCCGTGCCCGGTTTACCGAGCCCCCGGGTGAACTTTCGCGTCTCCGCGTGGCCCGCGACTGACATGTCGGGCCACAAACTCTCATTAACGTCCAGCAGAcgtgtgaataaataaattaaaaaaacattcaaagttTGTTCTCCGCCGTCCCGACCACCTCCGCGAGCGCCCGCGGTACAAAAACCCTTCCTGAAAGCCCTCCGCTCGCCCCGCCGTTAACTCTCATGTCCAGATGAACGCGCCGGATGCTTCGGTCCACGTTTCCAGGGCTTTAACGTCTCCAGAAAGCGTCGGCGGTCGCTTTCCCGTGCTGTCATGGTCTCGCGTCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU100659 True 448 lncRNA 0.57 2 5754020 5764874
TU100660 False 406 lncRNA 0.60 2 5746855 5764874

Neighbor

gene id symbol gene type direction distance location
LOC122351927 epha3,LOC107738584,LOC107676997 coding upstream 14785 5629122 ~ 5732070 (+)
c9h3orf38 LOC107549925,LOC107730394,LOC107664011,LOC107728235,LOC107676993,LOC107549751 coding upstream 219260 5523560 ~ 5527595 (+)
si:dkey-11f4.14 NA coding upstream 355669 5386472 ~ 5391186 (+)
igsf3l LOC107730347,LOC107670329,LOC107721263,LOC107549899 coding upstream 360586 5377251 ~ 5386269 (+)
cd58 NA coding upstream 370069 5369603 ~ 5376786 (+)
LOC122351459 dip2a,LOC107752588,LOC107720936,LOC107670331 coding downstream 51971 5816845 ~ 5865374 (+)
LOC122351464 LOC107752607,LOC107720938,LOC107689504,LOC107549742,LOC107549895,LOC107576878 coding downstream 219015 5983889 ~ 6002637 (+)
LOC122351517 NA coding downstream 237901 6002775 ~ 6004352 (+)
LOC122351516 LOC107720938,LOC107752607,LOC107689504,LOC107549895,LOC107549742 coding downstream 240478 6005352 ~ 6030322 (+)
LOC122351469 col4a1,LOC107557928,LOC107715912,LOC107688716,LOC107702910,LOC107721605 coding downstream 412199 6177073 ~ 6193230 (+)
G68013 NA non-coding upstream 184685 5467541 ~ 5562170 (+)
G67979 NA non-coding upstream 354476 5373409 ~ 5392379 (+)
G67970 NA non-coding upstream 405566 5338969 ~ 5341289 (+)
G67961 LOC107689507,LOC107670332,LOC107752589,LOC107549740,LOC107549921,LOC107730419 non-coding upstream 433295 5307018 ~ 5313560 (+)
G67955 NA non-coding upstream 449850 5296655 ~ 5297005 (+)
G68058 NA non-coding downstream 1465 5766339 ~ 5768260 (+)
G68069 NA non-coding downstream 31220 5796094 ~ 5797492 (+)
G68085 NA non-coding downstream 69266 5834140 ~ 5914281 (+)
G68101 LOC107670329,LOC107549899,LOC107730347,LOC107730410 non-coding downstream 125474 5890348 ~ 5892207 (+)
G68160 NA non-coding downstream 323606 6088480 ~ 6103697 (+)
trnam-cau_112 NA other upstream 289326 5457458 ~ 5457529 (+)
trnar-ccu_65 NA other upstream 289592 5457191 ~ 5457263 (+)
trnam-cau_111 NA other upstream 290012 5456772 ~ 5456843 (+)
trnar-ccu_64 NA other upstream 290280 5456503 ~ 5456575 (+)
trnar-ccu_63 NA other upstream 291413 5455370 ~ 5455442 (+)
G68097 LOC107730457,LOC107670341,LOC107549918,LOC100537317,LOC107752618 other downstream 119053 5883927 ~ 5885753 (+)
LOC122351907 LOC107670338,LOC107721263 other downstream 198010 5962884 ~ 5973123 (+)
si:ch211-167j6.3 NA other downstream 2576421 8341295 ~ 8342751 (+)
sumo3b sumo3b,LOC107668404,LOC107596521,LOC107749883,LOC103392195 other downstream 2666237 8431111 ~ 8433483 (+)
igf2bp2a igf2bp2a,LOC107749880,LOC107668393 other downstream 2695870 8460744 ~ 8506143 (+)

Expression


Co-expression Network