G68160


Basic Information

Item Value
gene id G68160
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 6088480 ~ 6103697 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU100836
atttaaatgtaaaacaaacaaaaagtaaaacagtTCATGAGGTTATTAGATATGTCTACTGCATTTGTGTTGGGGCTGACCGATTCTCAggggggaaaaacaaacattaaatacatttaatcaatATAGTAAAACCAGGGTGAGACCTTTGTGCAAATATTTCCTATATCATCTGGCTCAAACTGATTTTAATTAGATGGGAGAGGATAATTCAAACAATTACTTAAAACACTttacaaacaaatttaaaaacctTGAGCTGTCACATCATGTAATAAATAGAAAGCTTCTTCTCTATATTGGCTTTTTCTGTTCAGTTCCACACTTTCCTTGCTCCAACATAAATGTAATGAACTCCCTTTTTGAGCGTGAGCTCACTGTAAAGCGCACCCCGAATCCACCTCAGACcgttcaaaaaacaaaaacaaatccatttcaGACGTCAGTCAGCCCCCGCGCTGCCTTCCAAAACACCACAATGCTGTGGAACGAGCAAAGGTTATgaaatatccaaaaataaaaatgtactcgCACTAAATCTAGCTTATCCCGAACTTCAAAACTCTGTATCCTTCATTCAACAGTAAACATATTATTGGCGtttattaatatagttttatttctctAATAGTGTTTTTCTCTGTCTTCCGGCTCCAAGTCGCTTCCTCTCTTCAGTTGCACCTCTCATCTCTGAAGTCTCACGGCCTGTTATTAGCATGGTTTGTATGCACACATGCACTCTTCTGCAGTGTAAGATTAGCGCTGGTGGGCCAGAGTGTAA

Function

GO:

id name namespace
GO:0021591 ventricular system development biological_process
GO:0021592 fourth ventricle development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU100836 True 781 lncRNA 0.38 2 6088480 6103697

Neighbor

gene id symbol gene type direction distance location
LOC122351516 LOC107720938,LOC107752607,LOC107689504,LOC107549895,LOC107549742 coding upstream 58158 6005352 ~ 6030322 (+)
LOC122351517 NA coding upstream 84128 6002775 ~ 6004352 (+)
LOC122351464 LOC107752607,LOC107720938,LOC107689504,LOC107549742,LOC107549895,LOC107576878 coding upstream 85843 5983889 ~ 6002637 (+)
LOC122351459 dip2a,LOC107752588,LOC107720936,LOC107670331 coding upstream 223106 5816845 ~ 5865374 (+)
LOC122351927 epha3,LOC107738584,LOC107676997 coding upstream 356410 5629122 ~ 5732070 (+)
LOC122351469 col4a1,LOC107557928,LOC107715912,LOC107688716,LOC107702910,LOC107721605 coding downstream 73376 6177073 ~ 6193230 (+)
irs2b irs2b,LOC107715923,LOC107688717,LOC107559513,LOC107557930,LOC107721603,LOC107702923 coding downstream 143116 6246813 ~ 6261089 (+)
pdzk1 LOC107688772,LOC107721583,LOC107703056,LOC107551063,LOC107716762,LOC107602882 coding downstream 606509 6710206 ~ 6717797 (+)
st6gal2a st6gal2a,LOC107721598,LOC107688722,LOC107676409,LOC107716800,LOC107602911,LOC107551073 coding downstream 660172 6763869 ~ 6813022 (+)
uxs1 uxs1,LOC107688726,LOC107676432,LOC107551074 coding downstream 738881 6842578 ~ 6880028 (+)
G68085 NA non-coding upstream 174199 5834140 ~ 5914281 (+)
G68101 LOC107670329,LOC107549899,LOC107730347,LOC107730410 non-coding upstream 196273 5890348 ~ 5892207 (+)
G68069 NA non-coding upstream 290988 5796094 ~ 5797492 (+)
G68058 NA non-coding upstream 320220 5766339 ~ 5768260 (+)
G68056 NA non-coding upstream 323606 5746855 ~ 5764874 (+)
G68167 NA non-coding downstream 37922 6141619 ~ 6165064 (+)
G68195 NA non-coding downstream 191591 6295288 ~ 6323460 (+)
G68246 NA non-coding downstream 495830 6599527 ~ 6599806 (+)
G68247 NA non-coding downstream 569408 6673105 ~ 6673650 (+)
G68248 NA non-coding downstream 578927 6682624 ~ 6684496 (+)
LOC122351907 LOC107670338,LOC107721263 other upstream 115357 5962884 ~ 5973123 (+)
G68097 LOC107730457,LOC107670341,LOC107549918,LOC100537317,LOC107752618 other upstream 202727 5883927 ~ 5885753 (+)
trnam-cau_112 NA other upstream 630951 5457458 ~ 5457529 (+)
trnar-ccu_65 NA other upstream 631217 5457191 ~ 5457263 (+)
trnam-cau_111 NA other upstream 631637 5456772 ~ 5456843 (+)
si:ch211-167j6.3 NA other downstream 2237598 8341295 ~ 8342751 (+)
sumo3b sumo3b,LOC107668404,LOC107596521,LOC107749883,LOC103392195 other downstream 2327414 8431111 ~ 8433483 (+)
igf2bp2a igf2bp2a,LOC107749880,LOC107668393 other downstream 2357047 8460744 ~ 8506143 (+)
cryba2b cryba2b,LOC107749902,LOC107562110,LOC107663929,LOC107566327,LOC107560461,LOC107672280 other downstream 2759690 8863387 ~ 8866305 (+)
fev fev,LOC107749901,LOC107562104,LOC107663906,LOC107672289,LOC106581833 other downstream 2763400 8867097 ~ 8871633 (+)

Expression


Co-expression Network