G68309


Basic Information

Item Value
gene id G68309
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 6991833 ~ 6995856 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU101024
gagagggagctgCGCTGGATTCGTTCCCGCGGTAAGAGATAGACccctctccctcgctctctccgtcttaatgtttgtttaaatcgCGAAAAAAAACCCGTCTACATCAAATTTAAGAGCCGCGTTGCATCGCGCTCTCGCGAAGTCCGCCGCGAAACGCGTTTCTGCGCAGCGCTCGTTCTCCAGCGAGGGCCTCGCGCTCGCCGGGACAGCCTGCACATTcagaaaatcacattatttgtacaaaataaaCGCGGTTTTGCTCGAAGGCCAGCAACGGTAGCGAATGCATCGTGGCACGAGGATGCAGAGGGTTAAATGACATCAACTCTCCTTGACAATTTCATTAAGCTTCTTAGCTTCTTAAGCAAAGACTTCCAGGATTTTATATCATGGACTTAAGGTAAGAGCAAGTCCCTCTGATAAACACAAGAGACACAAGGCCTTCTTTCAGTGAAAGCTCCTTTATAGGGGCGGGATGGCTAGGATTATCTTTCCTTCTGtcctcgtctctctctctctctctctctctctctctctctcgtgcgCCATCTCAACCGGCTGAGCATTCCAGCAATGTATAGAAAGTTGTTTTGGACAGatgtttacattatattcaGGACATGACCCCATATTGCGCGACGCTCCTAGGCGTCAAAAGCGACCGGCTAACCCATTGAGAGATTTTAATAATTTCCTTCAAAGAAAGAACACCACAGCACCTCCGCAAGGCTCCAGCAAAGGTGTTATTCGGCCGCGTTCGAGGTTTTCTCCGGGTAAAGCTCAAACCAGCTGGAGCAAAAATCACAGAATTGTCCTCTCCTCCTTTATTTCTCATGTGcagcatttgcattttactCAGCTTAGCAAAAGAAATAGCCTGCAGCGAGAAAACTCTATCCACTATGCatataagaaagaaagagagggagaacgCCGGAATAAAAGACGTGAAAAAGAACACAGACGGGCTGACTGAAAGGAAATGAGAGATAATCTCAACGCTACTGTCCATTTTTCCAATGTAGTCGCAAGCCATCATCCGTAATGGGAAAAATGCATCAGCATGCGCCGCTAGACGAAGTGCAATCCACACGTTCTTTTGTCACCTAACCACGGATATCTTCACTCTACGGTCTTAAATAGTCTTTTGATGGTATCTCGAGACCAATTTACAGATCTTCACCATTATTACCATAGAGCAGACGCATTATGTCGGCCCGTCTTCGGGGAAGGGGGCATTCTCAGGGAAGCGTCTTCGCGTGTTACCTGAGGACACCGCAGGCGCGTTATCGTCCTCAGACCCTGCCAACTGTACGCGTCCCCATCTCTCCTGACAACTAAAGGGACCCATCACTGTTTCAGCCCACAGAGAATGACTCAAAGGGCCTTTAAAGTGAGTAAAACCCATTCTCTTTAATTCTGATTACACTCTGAAAGTGTCTTTAGCATGTGGCGGCTAAATTGGGCTATCAGCGCTAAGTAGCGGCGGGGAAGAAAAGAGCCAATTATGCCAGTCAAAGCCAGATGATGATTCTCATCTTCACTCTctctaacacactcacacactcacacacaaacaaaagagaggagaggaatATGTGTCTTTTGTTCTAAAATACAGAACGCATATCGCTTGACACACCTTTCACAGTATTGAGAGACACCTACGGATCCACGATTTCACTCTTACTGACTTCATAATGAGCCTCTACatctgtttaatataaatagcCAGAGGCTGTAAGATATAAATTCACATCCACAACAATCAGAAATActtatagtttaaaaataaagctgtattttctGAATCGACTGTGTactttgtttatttcatgcacGGCGGATGACTCAAACCCTATCAGATGTTTATTCGTGTGGGATAAAAGCAGAACCTGTAAAACCTTCAACAATGCAGTAAGATTTAACTTAATTCAAGTGACTATATCCTGAGGGTAATTTGTGCCAAATCTGAGCTTCGCGGTGCCTGCATGATTAATGTGCATAGAGGAGTTTATCCCTTCAAACACATTCGCTGTTTTGACAATCTTGCATTCTTAGAATAGTAAGGTGCTGTTTGACTAAAGCACAGTCCATTAACTCCTGATACACTCCGCTGGATGTGTCGTGGATCTCAGTTCACCTGCTTCCAGTGAACTTTTACGGGCTCGGAAGGGGTGAGACGCTTTGCAATCACAACATTAGGACACTTGGAAAAAATGGCTGAGAGGACtgaagtttgtttttcattcatcgatgagagagagagagagagagagagagcgagagagagggatgTACTGTGTCTTGTATGAAAATCCATCAA

Function

GO:

id name namespace
GO:0005516 calmodulin binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU101024 True 2329 lncRNA 0.45 2 6991833 6995856

Neighbor

gene id symbol gene type direction distance location
fhl2a fhl2a,fhl2,LOC107716797,LOC107676452,LOC107688730,LOC107721574,LOC108266723 coding upstream 27787 6956521 ~ 6964046 (+)
uxs1 uxs1,LOC107688726,LOC107676432,LOC107551074 coding upstream 111805 6842578 ~ 6880028 (+)
st6gal2a st6gal2a,LOC107721598,LOC107688722,LOC107676409,LOC107716800,LOC107602911,LOC107551073 coding upstream 178811 6763869 ~ 6813022 (+)
pdzk1 LOC107688772,LOC107721583,LOC107703056,LOC107551063,LOC107716762,LOC107602882 coding upstream 274036 6710206 ~ 6717797 (+)
irs2b irs2b,LOC107715923,LOC107688717,LOC107559513,LOC107557930,LOC107721603,LOC107702923 coding upstream 730744 6246813 ~ 6261089 (+)
mfsd9 LOC107716769,LOC107688732,LOC107602885,LOC107551077,LOC107721579,LOC107676555 coding downstream 104573 7100429 ~ 7106362 (+)
inpp4aa inpp4a,inpp4aa,LOC107676472,LOC107688733,LOC107602877,LOC107721597 coding downstream 121690 7117546 ~ 7142648 (+)
LOC122351345 si:dkey-4e7.3,LOC107688734,LOC107602908,LOC107716768 coding downstream 147263 7143119 ~ 7153966 (+)
LOC122351346 si:dkey-4e7.3,LOC107688734,LOC107602908,LOC107716768 coding downstream 154075 7149931 ~ 7153764 (+)
ihha ihha,LOC107716791,LOC107688738,LOC107721594,LOC107668405,LOC107551082,LOC107602904 coding downstream 245480 7241336 ~ 7247598 (+)
G68304 si:dkeyp-118h3.5,gpr45,LOC107602888,LOC107688775,LOC107716773,LOC107676540,LOC107721584,LOC107551066 non-coding upstream 17132 6963155 ~ 6974701 (+)
G68296 nck2a,nck2,LOC107688727,LOC107602910,LOC105022090,LOC107716798 non-coding upstream 48512 6907738 ~ 6943321 (+)
G68254 NA non-coding upstream 283640 6707841 ~ 6708193 (+)
G68252 NA non-coding upstream 296922 6694678 ~ 6694911 (+)
G68251 LOC107551047,LOC107702999,LOC107716777,LOC107688771,LOC107602892,LOC100331465 non-coding upstream 299993 6691342 ~ 6691840 (+)
G68405 NA non-coding downstream 203413 7199269 ~ 7199817 (+)
G68401 NA non-coding downstream 260824 7256680 ~ 7259394 (+)
G68424 NA non-coding downstream 266685 7262541 ~ 7263713 (+)
G68397 desma,LOC107688742,LOC107602901,LOC107716787 non-coding downstream 284911 7280767 ~ 7301495 (+)
G68435 NA non-coding downstream 339635 7335491 ~ 7336359 (+)
LOC122351907 LOC107670338,LOC107721263 other upstream 1018710 5962884 ~ 5973123 (+)
G68097 LOC107730457,LOC107670341,LOC107549918,LOC100537317,LOC107752618 other upstream 1106080 5883927 ~ 5885753 (+)
trnam-cau_112 NA other upstream 1534304 5457458 ~ 5457529 (+)
trnar-ccu_65 NA other upstream 1534570 5457191 ~ 5457263 (+)
trnam-cau_111 NA other upstream 1534990 5456772 ~ 5456843 (+)
si:ch211-167j6.3 NA other downstream 1345439 8341295 ~ 8342751 (+)
sumo3b sumo3b,LOC107668404,LOC107596521,LOC107749883,LOC103392195 other downstream 1435255 8431111 ~ 8433483 (+)
igf2bp2a igf2bp2a,LOC107749880,LOC107668393 other downstream 1464888 8460744 ~ 8506143 (+)
cryba2b cryba2b,LOC107749902,LOC107562110,LOC107663929,LOC107566327,LOC107560461,LOC107672280 other downstream 1867531 8863387 ~ 8866305 (+)
fev fev,LOC107749901,LOC107562104,LOC107663906,LOC107672289,LOC106581833 other downstream 1871241 8867097 ~ 8871633 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location