G68446


Basic Information

Item Value
gene id G68446
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 7853481 ~ 7854278 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU101216
ACGACCGTGTAGCAAAGCACTAAAACCTACCGAGAGCAACTGAGGACCACAAACCACTGCATTGACAATCACCCGAAATCCTAGCAAGCACACAGCAATGTGATGAAAACTATAGGATTACCAAATAAAACTTGCTCTAAAACTACAAGCTTACCCTATAActttgtacagtatatacaatatttacatacacaggTGATGCTCCGTGTGACACCGATGAGGACTCAGTGTTGCTCAGGCCAAGGCTCTCCACTGACGTCCACATGGATTCGTGGAGCGACGCTTCTGCTGTTTGTGAAGCTCTCGGTGACCAGGACGCGTCCGTCAGGCCACTCTGTCTCCAGCAGTGAAGGGCAGTGGAGCATCTCCCACAGGCGCTGCTTGATCTTCAGCCCCAGCTTGAGGCTGTAGGGACGCTGTCGACCGTGCCGTGACTTCATCATGGGCTCCACACAGCCGTAGATGTCCTGGTAGTCCTGCACACAGCGGCTTCCTGCTGACACAGAGACTCCAGACACTTGTCCACTGAAGAGGCCGACTGTGCAGGACAGATGTCAGGAAGGACAGCGGCGTTCTTCAGGTAGCGCTCTTCCAGTCCGTCAGGTGTCTGAGCTTCGACAGAGGTGCTGCTGTAGGTGTGATCTGACCTGATTACAGCAGCCAGCTGTGAAAGCTCACAGGCCTCTTGAAGAGAAGTCTCCACCAAGAATCCCTTCAGGTGTTTGGGAAGAGCCCTTCTTCTTCTGGAGCGCCGCTGCTTCATGAGGACGCCTGAGAAACACTTTACAGCTTTGACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU101216 True 798 lncRNA 0.52 1 7853481 7854278

Neighbor

gene id symbol gene type direction distance location
nrp2b nrp2b,LOC107688766,LOC107752901,LOC107668386,LOC107716756,LOC107596550 coding upstream 31587 7756774 ~ 7821894 (+)
pard3bb pard3bb,LOC107688750,LOC107716778,LOC107721601,LOC107668384,LOC107593023 coding upstream 124690 7473998 ~ 7728791 (+)
fn1a fn1a,LOC107716781,LOC107688749,LOC107668382,LOC107721590 coding upstream 422997 7404352 ~ 7430484 (+)
LOC122351251 LOC107716765,LOC107721581,LOC107551069,LOC107668359 coding upstream 470279 7380818 ~ 7383202 (+)
cfap65 cfap65,LOC107688747,LOC107668360,LOC107716758,LOC107735777 coding upstream 472957 7367664 ~ 7380524 (+)
abcb6b abcb6b,abcb6a,abcb6,LOC107688753,LOC107596549,LOC107716755 coding downstream 943 7855221 ~ 7881034 (+)
ttll4 LOC107738099,LOC107688755,LOC107752897,LOC107596548,LOC107593000,LOC107668375 coding downstream 39337 7893615 ~ 7907304 (+)
prkag3b prkag3b,LOC107738101,LOC107596559,LOC107752899,LOC107668376 coding downstream 53809 7908087 ~ 7920562 (+)
fer1l6 fer1l6,LOC107752896,LOC107596537,LOC107738098 coding downstream 67400 7921678 ~ 7938502 (+)
raph1a raph1,raph1a,LOC107752894,LOC107592998,LOC107688759,LOC107668371 coding downstream 108129 7962407 ~ 8017887 (+)
G68435 NA non-coding upstream 517122 7335491 ~ 7336359 (+)
G68397 desma,LOC107688742,LOC107602901,LOC107716787 non-coding upstream 551986 7280767 ~ 7301495 (+)
G68424 NA non-coding upstream 589768 7262541 ~ 7263713 (+)
G68401 NA non-coding upstream 594087 7256680 ~ 7259394 (+)
G68405 NA non-coding upstream 653664 7199269 ~ 7199817 (+)
G68668 NA non-coding downstream 349575 8203853 ~ 8205963 (+)
G68678 NA non-coding downstream 368309 8222587 ~ 8222817 (+)
LOC122351403 NA non-coding downstream 746446 8600724 ~ 8614984 (+)
G68808 NA non-coding downstream 971934 8826212 ~ 8827046 (+)
LOC122352063 NA non-coding downstream 1005195 8859473 ~ 8860379 (+)
LOC122351907 LOC107670338,LOC107721263 other upstream 1880358 5962884 ~ 5973123 (+)
G68097 LOC107730457,LOC107670341,LOC107549918,LOC100537317,LOC107752618 other upstream 1967728 5883927 ~ 5885753 (+)
trnam-cau_112 NA other upstream 2395952 5457458 ~ 5457529 (+)
trnar-ccu_65 NA other upstream 2396218 5457191 ~ 5457263 (+)
trnam-cau_111 NA other upstream 2396638 5456772 ~ 5456843 (+)
si:ch211-167j6.3 NA other downstream 487017 8341295 ~ 8342751 (+)
sumo3b sumo3b,LOC107668404,LOC107596521,LOC107749883,LOC103392195 other downstream 576833 8431111 ~ 8433483 (+)
igf2bp2a igf2bp2a,LOC107749880,LOC107668393 other downstream 606466 8460744 ~ 8506143 (+)
cryba2b cryba2b,LOC107749902,LOC107562110,LOC107663929,LOC107566327,LOC107560461,LOC107672280 other downstream 1009109 8863387 ~ 8866305 (+)
fev fev,LOC107749901,LOC107562104,LOC107663906,LOC107672289,LOC106581833 other downstream 1012819 8867097 ~ 8871633 (+)

Expression


Co-expression Network