G68554 (nrp2b,LOC107596550,LOC107716756,LOC107688751,LOC107593002,LOC107752901)


Basic Information

Item Value
gene id G68554
gene name nrp2b,LOC107596550,LOC107716756,LOC107688751,LOC107593002,LOC107752901
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 7820008 ~ 7821889 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU101355
TTAAtcatactttattaaataataataataacaataaaaaagaacttTTTTCTGTACAAAGTCTACAAACAACAATTTTTGAAAGTTCTGACCAGTGCCGGGATCTCCTTGTCTTTTGGTGTTGGCCTCCTGTCCCAGACAGACGAGGTAATACTATCACAGCTCTGCAGCAAAGCCAAAACAGGCCAGAGCTCCAAGGCACTTGGAAAAGAGTCAACAGAGTCCAATGAAAACCGAGCTGAATACACAAGTCAACAGATCTCCCAGCGTGGCTCTGGGGAGCGAGAGGCCAGTCTGAGGTACAATAAAGAAATTTACACACACTTCCCCCATGTGTGTACTCGTTCTAACGCTCTCTTCAACCCCGAGGTGAAACACTCTGTGAAACTCTCACCCTTCTCTCAGGCTTGCACCAAACCTGTTTTGTTAGCCTTCATTTTCAGCAGCCCGAAATAAACCATGGAGTAAACAGACAggtgaaatgaaagaaagcaaGTGTAAGGCCCGACTCCTCCGAGGCCCCAGTGACTTCAAACCCAAGGACTGGTGTTTCAAAATGGCTCTCCTCCAAAACAGTTTGCTTAAGGCTCGATTGTTTGTACATGAAAGTGGCTTGGGGATTTTCCAGCTCCTTCACCAAAGTCGCTCTGCCAGCTTGAGTCTTTGTTACTTCAAGAATAGGGTAAAGAGAACTgaagattctctctctctctcaacacTCTTGAGCTCAGTGGCTCTGAATCCTTAGCAATCCATAGGTTGCGATAAATTAGTTTGAATTGTCAGCACAGAGTCTTCAACTCTATGCTTAAAAATCAAACAgtcaaagcaaaaaataaaaaacaaaggaaaagagaaaaaagacaaaagacaatCCTAATACTTCAATCTAAAAGGATTTTTCTGAACTTAATACAGcgtgttttctttcttattgTCTAATGgccacaacaaaaacaatatgctACAAACAGACTGAACCGAAGTACAAAACATTCATAACAGGCGTTGACACTTCAAAACGGTTGTGAAAAGTGGCAAAAGACAGGATGGGATGAGAACTTACGCGAGTCTAAACTAAAGCAAATGTCCACAATATTGTAGGCCACAGCGTTCACACAATGGAGGCCGAGATTTCACAAGCAATCTGTCTTCTAGTCCTAGTGCCTCTCCCTCTCTTCTAACTTCCATTAAGCATTATTagattgtatttttctttacaaatctatagcaatatacatttctttaaagttctttttcttttttgaattgTGGAAAGTCATTAGGTTGATATGTGTTGATCACGATTTGCTCCCATTGAGCTGTCCACAGGAAGCTTCTATGCTCCCAGTGATCCTTCAACAATCCCGGTCAGAGATCAGCCCTATTTTAACGGCGTGAGGTCCATTCACAGTTTTGGATCTGGCCGGCACCAGTTCACGAGCGGACAGAACGCCTCTCCTGATCGGCTGCCATCAGGCCTCAGAACAGCAGCGCTGCTGGTTGATCTTCACCTTGTGCTTGATACCGTCGTACAGCTCGAAGTTGTAGTTCTCCAGCGTGGTGGTGCTGCGGGACGACAGGCCGCTGTAGGAGCAGGTGCAGTACAGCAGGAGCCCGGCACACACTGCTCCTAACAGAACGCCCAGGGAACTCATGACGATGATGGTGACCAGAATGGGATCAAGGGTGTACAGCCAGGCGTTGTCCTTCTCTGAGATCCGAGTCACTGGAGGTTCTCGTGAGGGGTTGGGTGTGGTCCAAGCAGGGA

Function

symbol description
nrp2b Predicted to enable heparin binding activity; metal ion binding activity; and transmembrane signaling receptor activity. Acts upstream of or within several processes, including axon development; neural crest cell migration; and vasculogenesis. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in several structures, including head; mesoderm; nervous system; neural crest cell; and neural plate. Orthologous to human NRP2 (neuropilin 2).

NR:

description
PREDICTED: neuropilin-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU101355 True 1771 lncRNA 0.44 2 7820008 7821889

Neighbor

gene id symbol gene type direction distance location
LOC122352131 si:ch73-199e17.1,LOC107668388,LOC107716782,LOC107716784,LOC102213860,LOC101168255,LOC102793273 coding downstream 470592 7347110 ~ 7349416 (-)
tuba8l3 tuba8l3,LOC107387629,LOC102223550,LOC108423972,LOC107716784 coding downstream 473722 7343107 ~ 7346286 (-)
dnajb2 dnajb2,LOC107602899,LOC107668399,LOC107688744,LOC107716785,LOC107721618 coding downstream 483622 7329082 ~ 7336386 (-)
desma desma,LOC107688742,LOC107602901,LOC107716787,LOC107721591,LOC107668394 coding downstream 518479 7295578 ~ 7301529 (-)
LOC122352006 bin1,LOC107688739,LOC107716789,LOC107721593,LOC107668401,LOC563561 coding downstream 551708 7259194 ~ 7268300 (-)
si:ch211-67e16.11 si:ch211-67e16.11,LOC107596562,LOC105899123 coding upstream 59289 7881178 ~ 7892408 (-)
si:ch211-67e16.4 LOC107596547,LOC107738112,LOC107668355,LOC107688758,LOC107752914,LOC107592999 coding upstream 116163 7938052 ~ 7947805 (-)
si:ch211-67e16.3 NA coding upstream 126491 7948380 ~ 7952282 (-)
LOC122352095 LOC107688783,LOC107738103,LOC107596557 coding upstream 133200 7955089 ~ 7957338 (-)
abi2a abi2,abi2a,LOC107738105,LOC107752895,LOC107592995,LOC103029249,LOC108423993,LOC107688767 coding upstream 204340 8026229 ~ 8055168 (-)
G68555 nrp2b,LOC107688766,LOC107688751,LOC107752901 non-coding downstream 1176 7815249 ~ 7818832 (-)
G68489 NA non-coding downstream 438500 7381290 ~ 7381508 (-)
G68473 NA non-coding downstream 478514 7327829 ~ 7341494 (-)
LOC122352164 NA non-coding downstream 784647 6982678 ~ 7035361 (-)
LOC122351994 NA non-coding downstream 924611 6892652 ~ 6895397 (-)
LOC122352023 NA non-coding upstream 648974 8470863 ~ 8474578 (-)
G68822 NA non-coding upstream 939882 8761771 ~ 8835225 (-)
G68826 NA non-coding upstream 971972 8793861 ~ 8801749 (-)
G68830 NA non-coding upstream 980496 8802385 ~ 8805405 (-)
G68839 NA non-coding upstream 994631 8816520 ~ 8817618 (-)
LOC122351350 cb064,LOC107688735,LOC107716767,LOC107676512,LOC108232354,LOC103042106,LOC105927538 other downstream 666054 7070985 ~ 7153954 (-)
G68188 irs2b,LOC107715923,LOC107688717,LOC107559513,LOC107557930,LOC107721603,LOC107702923 other downstream 1558939 6246900 ~ 6261069 (-)
LOC122351979 NA other downstream 1720096 6099071 ~ 6099912 (-)
G68124 dip2a,LOC107549743,LOC107752588,LOC107720936 other downstream 1776083 6043275 ~ 6043925 (-)
LOC122351463 LOC107689507,LOC107549921,LOC107670332,LOC107752589,LOC107549740 other downstream 1888872 5912855 ~ 5931136 (-)
LOC122351623 raph1,LOC107592998,LOC107668371,LOC107752894,LOC107738113,LOC107688760,LOC107738116,LOC107596536 other upstream 192560 8014449 ~ 8024672 (-)
als2a als2a,LOC107688763,LOC107596546,LOC107668398,LOC107752891,LOC107592992,LOC107738114 other upstream 254579 8076468 ~ 8094847 (-)
LOC122351483 LOC107663814,LOC107733620,LOC107555196,LOC107720141,LOC107600416,LOC107655476 other upstream 2086299 9908188 ~ 9910178 (-)
trim13 trim13,LOC107720128,LOC107555217,LOC107663864,LOC107706093,LOC107600394,LOC107655513 other upstream 2611618 10433507 ~ 10443619 (-)
fdx1 fdx1,LOC107663820,LOC107706088,LOC107720152,LOC107655504,LOC107600437,LOC107555213,LOC107655505 other upstream 2693383 10515272 ~ 10519457 (-)

Expression


Co-expression Network