LOC122351483 (LOC107663814,LOC107733620,LOC107555196,LOC107720141,LOC107600416,LOC107655476)



Basic Information


Item Value
gene id LOC122351483
gene name LOC107663814,LOC107733620,LOC107555196,LOC107720141,LOC107600416,LOC107655476
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 9908188 ~ 9910178 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence


>TU102057
GGGAAATTACAGGAAATGGTAAATATTAACTCAAGGCATAAAGCTCACTTCTGTGATGAAGAAGCTGACTCACCTCACAAACCTTGTTTCTCAGGAGTGAAGGCAGACAATACAAAAAACAGATGACACTTGAGAAGTCAGCCACACGACGCTGAATGTGACCATGACTCTCTTGTGACTGCATCCATACACGCTTGAAAACTATCATGTGGGGAAAGTGAGGGATCAGCCGCACTTGtgCGTTCGCCACATCTCTGTATTTGTTCTCAAGAAGCAAGAAAAAGCAATGGGGTCTCCGGAAATAAACTCAACTGACTGTCTTCCTATCGATGAGTACATTAAGTCTTATTATCTGCCAGTGATGTACAGCGTCATTTCTGTAGTCGGGCTCGTGGGAAACTTCCTGGTGATCATTGTTTACCTACTAAAACTCAGGCCTTGGAAGAGCAGCAGCATTATAATGGTGAACCTGGCAGTAGCTGATCTGCTGTATGCGTTGAGTTTACCTGTGCTGGTCCAGTTTTACGTGACCAAAAACTGGACTCTGGGGGAGTTAATGTGCCGTTTCATCCGCTTCTGCTTCTACTACAACCTCTACGGCAGCGTCCTCTTCCTAACCTGCCTCAGCATCTTCCGTTACGTGGCAGTGGTGCACCCTCTGAAGGCTGCTGAGATCCGGAGGAAAAGATGGGCCATCTTGGCTTGTCTGGCAGTCTGGGCCATTTCCTTGGTGGAGATCGGCCCGATGCTGGGGATGATTACTTTACAGCAGAAGGACAACATGACTAAATGCCTTGACTTCGCCAGTAATGATCCCCAGGTGGTGTGGTGGTACGGTTGGGTACTCACGGGGTTTGGATACGTGTTGCCGCTGCTGGTGGTGTGCTGGAGCTACACTCACATCGCAGGCTCTCTGGGCAGCAGCATATCCAGAAACAGGCCGAGTCGCTCCCGAGTTCGCACGCTGTCCGTTCTGATCCTGCtggtgtttgtgctgtgcttctTGCCGTACCATATCATGCGTCTGCTGAGGGTGGACAGCCTGCGCAGGCCTGGCGTGTCATGCATACAGAGGAGAGGCATCCAC
>XM_043248562.1
CACCTCACAAACCTTGTTTCTCAGGAGTGAAGGCAGACAATACAAAAAACAGATGACACTTGAGAAGTCAGCCACACGACGCTGAATGTGACCATGACTCTCTTGTGACTGCATCCATACACGCTTGAAAACTATCATGTGGGGAAAGTGAGGGATCAGCCGCACTTGtgCGTTCGCCACATCTCTGTATTTGTTCTCAAGAAGCAAGAAAAAGCAATGGGGTCTCCGGAAATAAACTCAACTGACTGTCTTCCTATCGATGAGTACATTAAGTCTTATTATCTGCCAGTGATGTACAGCGTCATTTCTGTAGTCGGGCTCGTGGGAAACTTCCTGGTGATCATTGTTTACCTACTAAAACTCAGGCCTTGGAAGAGCAGCAGCATTATAATGGTGAACCTGGCAGTAGCTGATCTGCTGTATGCGTTGAGTTTACCTGTGCTGGTCCAGTTTTACGTGACCAAAAACTGGACTCTGGGGGAGTTAATGTGCCGTTTCATCCGCTTCTGCTTCTACTACAACCTCTACGGCAGCGTCCTCTTCCTAACCTGCCTCAGCATCTTCCGTTACGTGGCAGTGGTGCACCCTCTGAAGGCTGCTGAGATCCGGAGGAAAAGATGGGCCATCTTGGCTTGTCTGGCAGTCTGGGCCATTTCCTTGGTGGAGATCGGCCCGATGCTGGGGATGATTACTTTACAGCAGAAGGACAACATGACTAAATGCCTTGACTTCGCCAGTAATGATCCCCAGGTGGTGTGGTGGTACGGTTGGGTACTCACGGGGTTTGGATACGTGTTGCCGCTGCTGGTGGTGTGCTGGAGCTACACTCACATCGCAGGCTCTCTGGGCAGCAGCATATCCAGAAACAGGCCGAGTCGCTCCCGAGTTCGCACGCTGTCCGTTCTGATCCTGCtggtgtttgtgctgtgcttctTGCCGTACCATATCATGCGTCTGCTGAGGGTGGACAGCCTGCGCAGGCCTGGCGTGTCATGCATACAGAGGAGAGGCATC

Function


NR:

description
PREDICTED: 2-oxoglutarate receptor 1-like, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU102057 True 1087 TUCP 0.50 2 9908188 9910178
XM_043248562.1 False 1014 mRNA 0.51 2 9908191 9910108

Neighbor


gene id symbol gene type direction distance location
igsf3 igsf3,LOC107707768,LOC107663867,LOC107732353,LOC107658230,LOC108266369,LOC107565045 coding downstream 104596 9677254 ~ 9803592 (-)
ttf2 ttf2,LOC107707769,LOC107663926,LOC107732352,LOC107658229,LOC105900813 coding downstream 238666 9658403 ~ 9669522 (-)
nxph2a nxph2a,LOC107751612,LOC107663841,LOC107556444,LOC107720323,LOC107658205,LOC107558041 coding downstream 282021 9611019 ~ 9626167 (-)
cxcr4b cxcr4b,LOC107749897,LOC107663919,LOC107706106,LOC107676218,LOC107568342,LOC107556439 coding downstream 719714 9186577 ~ 9188474 (-)
dars1 dars,LOC107676220,LOC107663896,LOC102778528,LOC107706104 coding downstream 723635 9160309 ~ 9184553 (-)
LOC122351281 LOC107707767,LOC107663877 coding upstream 80012 9990190 ~ 9993472 (-)
acp6 acp6,LOC107748216,LOC107572529,LOC107663850,LOC107720144,LOC107600425,LOC107655526 coding upstream 141447 10051625 ~ 10057760 (-)
gja5a cx45.6,LOC107663873,LOC107748213,LOC107572527,LOC107720145,LOC107655501,LOC107600426 coding upstream 150140 10060318 ~ 10070885 (-)
LOC122351801 NA coding upstream 182172 10092350 ~ 10096244 (-)
LOC122351802 NA coding upstream 187902 10098080 ~ 10101728 (-)
G69004 NA non-coding downstream 16592 9890651 ~ 9891596 (-)
G68994 NA non-coding downstream 235287 9672572 ~ 9672901 (-)
G68988 NA non-coding downstream 253621 9654116 ~ 9654567 (-)
G68987 ugt1a4,LOC107556441,LOC107663842,LOC107663839,LOC107558044,LOC107658227,LOC107720327,LOC107558046 non-coding downstream 255586 9632033 ~ 9652602 (-)
G68981 NA non-coding downstream 297449 9607304 ~ 9610739 (-)
G69018 NA non-coding upstream 2908 9913086 ~ 9945802 (-)
G69147 NA non-coding upstream 175255 10085433 ~ 10087022 (-)
G69136 LOC107555234,LOC107655498,LOC107748211,LOC107663925,LOC107720146,LOC107600385 non-coding upstream 198797 10108975 ~ 10110243 (-)
G69157 NA non-coding upstream 207615 10117793 ~ 10242212 (-)
G69168 NA non-coding upstream 226471 10136649 ~ 10138759 (-)
als2a als2a,LOC107688763,LOC107596546,LOC107668398,LOC107752891,LOC107592992,LOC107738114 other downstream 1813341 8076468 ~ 8094847 (-)
LOC122351623 raph1,LOC107592998,LOC107668371,LOC107752894,LOC107738113,LOC107688760,LOC107738116,LOC107596536 other downstream 1883516 8014449 ~ 8024672 (-)
LOC122351350 cb064,LOC107688735,LOC107716767,LOC107676512,LOC108232354,LOC103042106,LOC105927538 other downstream 2754234 7070985 ~ 7153954 (-)
G68188 irs2b,LOC107715923,LOC107688717,LOC107559513,LOC107557930,LOC107721603,LOC107702923 other downstream 3647119 6246900 ~ 6261069 (-)
LOC122351979 NA other downstream 3808276 6099071 ~ 6099912 (-)
trim13 trim13,LOC107720128,LOC107555217,LOC107663864,LOC107706093,LOC107600394,LOC107655513 other upstream 523329 10433507 ~ 10443619 (-)
fdx1 fdx1,LOC107663820,LOC107706088,LOC107720152,LOC107655504,LOC107600437,LOC107555213,LOC107655505 other upstream 605094 10515272 ~ 10519457 (-)
mrasa LOC107551943,LOC107663912,LOC107733654,LOC107600440,LOC107738526 other upstream 769980 10680158 ~ 10686627 (-)
LOC122351858 slc10a2,LOC107663831,LOC107567642,LOC107675341,LOC107738529 other upstream 1486488 11396666 ~ 11493120 (-)
LOC122351308 si:rp71-84d19.3,gtpbp8,LOC107663822,LOC107567641,LOC107738531,LOC107733632,LOC107598183 other upstream 1586769 11496947 ~ 11500495 (-)

Expression



Co-expression Network