G69080


Basic Information

Item Value
gene id G69080
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 10448701 ~ 10457161 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU102162
CTGAATCACAGCTGAAACGCTCCACAGCAGGCACAGAATAAATAGTTGGTGAGACAGGCTCAGTGGTTGGAGCTCTGGGCGCTGGAGAAGATCTGCTTGTGGACGCCGCTTCCTTCTGTTCAGGGGAGGTAGACACAGCTGCACTGGCAGGTGAAGAAGGCTCTAGACTGTGCTCTGAAACAGagacaaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttttaaatctcTTTACAAGTCATTGACATGACAGCAGCAGGACAAAACAAGAGAGAAGAACCCACCTGATTCTACAGAGGGTCCAGAGTCCAAAATAACTTGACAGGGCATTGTGATACGGTACCGTTTTGAGAATAACAAACTCTGAGACT

Function

GO:

id name namespace
GO:0030097 hemopoiesis biological_process
GO:0030098 lymphocyte differentiation biological_process
GO:0002520 immune system development biological_process
GO:0002521 leukocyte differentiation biological_process
GO:0042110 T cell activation biological_process
GO:0001775 cell activation biological_process
GO:0048534 hematopoietic or lymphoid organ development biological_process
GO:0007275 multicellular organism development biological_process
GO:0043383 negative T cell selection biological_process
GO:0030217 T cell differentiation biological_process
GO:0002376 immune system process biological_process
GO:0046649 lymphocyte activation biological_process
GO:0045321 leukocyte activation biological_process
GO:0045058 T cell selection biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU102162 True 373 lncRNA 0.48 2 10448701 10457161

Neighbor

gene id symbol gene type direction distance location
spryd7b spryd7b,spryd7,LOC107655514 coding upstream 2228 10442070 ~ 10446473 (+)
LOC122351943 NA coding upstream 32878 10411680 ~ 10415823 (+)
LOC122351200 LOC107663844,LOC107555219,LOC107706096,LOC107706098,LOC107663847 coding upstream 40663 10405983 ~ 10408038 (+)
LOC122351198 LOC107706096,LOC107663847,LOC107663844,LOC107555219,LOC107706098 coding upstream 43206 10402345 ~ 10405495 (+)
dcbld2 dcbld2,LOC107600392,LOC107655516,LOC107706081 coding upstream 168798 10262378 ~ 10279903 (+)
cenpj cenpj,LOC107663885,LOC107720130 coding downstream 22261 10479422 ~ 10487305 (+)
arhgap20 arhgap20,LOC107706091,LOC107663900 coding downstream 49149 10506310 ~ 10515066 (+)
dnajc3a dnajc3,dnajc3a,LOC107663878 coding downstream 68984 10526145 ~ 10531299 (+)
hs6st3b hs6st3b,LOC107555209,LOC107733651,LOC107663930,LOC107600438,LOC107720131,LOC107655503 coding downstream 101480 10558641 ~ 10602491 (+)
pth2ra pth2r,LOC107733633,LOC107663806 coding downstream 170982 10628143 ~ 10670099 (+)
LOC122351945 NA non-coding upstream 13559 10423214 ~ 10435142 (+)
G69090 NA non-coding upstream 26448 10422043 ~ 10422253 (+)
G69089 NA non-coding upstream 28009 10420482 ~ 10420692 (+)
LOC122351843 NA non-coding upstream 269321 10175048 ~ 10179380 (+)
G69042 NA non-coding upstream 340517 10107840 ~ 10108184 (+)
G69109 LOC107555213,LOC107706088,LOC107663820,LOC107720152,LOC107600437,LOC107655505,LOC107655504 non-coding downstream 58145 10515306 ~ 10516332 (+)
G69284 NA non-coding downstream 326304 10783465 ~ 10783702 (+)
G69285 NA non-coding downstream 327201 10784362 ~ 10784599 (+)
G69286 NA non-coding downstream 329015 10786176 ~ 10786462 (+)
LOC122351147 NA non-coding downstream 346699 10803860 ~ 10814619 (+)
il1rapl1a il1rapl1a,LOC107655515,LOC107600393,LOC107663843,LOC107555221,LOC107706095 other upstream 53471 10328731 ~ 10395230 (+)
si:dkey-100n23.5 LOC107748207,LOC107555230,LOC107720121,LOC107655523 other upstream 273918 10167336 ~ 10174783 (+)
piga piga,LOC107748211,LOC107555234,LOC107663925,LOC107655498,LOC107600385,LOC107720146 other upstream 335345 10092350 ~ 10113356 (+)
thsd7ba thsd7b,thsd7ba,LOC107663893,LOC107751610,LOC107720322,LOC107658187,LOC107658188,LOC107558036 other upstream 881704 9443125 ~ 9566997 (+)
LOC122351827 LOC107568346,LOC107676221,LOC566927,LOC107706103,LOC107706102,LOC108412955 other upstream 1287880 9156045 ~ 9160821 (+)
creb1b creb1b,creb1,LOC107598164,LOC107738506,LOC107698524,LOC107663917 other downstream 564575 11021736 ~ 11030409 (+)
LOC122352020 uggt2,LOC107600415,LOC107720140,LOC107663813,LOC107655477,LOC108430493,LOC107706079,LOC108266228 other downstream 1008443 11465604 ~ 11490149 (+)
G69527 arhgap15,LOC107563181,LOC107673132,LOC107709415,LOC107555858,LOC107675340,LOC107711394 other downstream 1589338 12046499 ~ 12155804 (+)
epc2 epc2,itm2b,LOC107709422,LOC107724031,LOC107675331,LOC107673124,LOC107709423 other downstream 1977827 12434988 ~ 12452365 (+)
G69670 LOC107673130,LOC107555834,LOC107709428,LOC107724029,LOC107675357 other downstream 2170374 12627535 ~ 12629535 (+)

Expression


Co-expression Network