G69157


Basic Information

Item Value
gene id G69157
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 10117793 ~ 10242212 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU102283
TGCGGATTTATTTCACTGTAATCTGTAATTACGTCATcgttaaaatacagaaatttaaataaagatagATAGGACAGGTTAGTATATGTAGATTACAAAACAAAGCTaatgtaatgttgttttttaaggagaaaataacaaaacaaagactggactgttttattaattttttttgccattacaAAATAAGAAATCTTGTAAAGAGTGTCAGCTGTTACTGTTACTGACAGCGATATGTCTTCAGCTAGTGTACAGTCAGTTAGTTGATGATTATAAACACAAAAGCTGCAGGTAAACATCAGATCTGAATCGCCCCTGAAGAAGAGGTTGATAAACAGACCTTCACAAACTACAGCTGATGGgaaacaagagagaaagagacaaaggGAAATGAAGAGCGAGTGTTTGCATCTAAGAACAAAAGGTCACGCAGAGCAAAACTGGACTGATGTCAGATTTCTACCACAATCCCTTCTACTGGTAAAATCCAAATTTAAAGGACAAGCTTAGATGACCATCCAGCATCCAAAACTCTAGCAATGCTGTTTTTTCATCTTCCATTGTGCCCAGATTTGCTTCTGCGTGACCTTTACCCTAGGGAACCATATTTTTGTACAGTTGTCTCCGTAGATGCAGATGACCCAGCAGGACCCTTAGGCTCTGGAGCGGACAATGCCGCATGGCGCTGTTCCTTTAGCCAGACTACATGGTGTGAGCACAGGTTGTTCTGTCTGCTCTCCCTCTGTAAGGGCGGCGCGGATCTTGCGCACCACGTAGGCACCGGCTTCcgcaaacaatacaaaaatatagcatacattttcataaatacaatattaaaacatgctcaaacattttaaaagtctgAAATACTCAGCTGAATGAATTGGAAAAGGCAgtctttaattacattatatacaacAAAGATTATTTTGAAGTGGTGAATTGCTCGATTTAAAGCTTTTCCACTttaatacagtacaaaaaaaaaaacaacaacttatgCTTTTACCCGTCATTAACAGCAAAGAAAGACATACTATCAACcattttctttcctgttttccAACTATCCACATTTTTCTTGATGTAAAAATAGGCACCATTTGTAAATTTCACCAATCTAGCTCCAGGTCTCAACCAcgtccagctatttttaactGTTCAAGAGTTCATTTttctgcttgatattgaaaataagcgtcttatgttatttaaatgtatcatcattcattatgaacacactggtttgtagtgcaaacagttttactgttttatgcaCGTTGTTATTTTCCACGTTATGTACCTATGCCGTCTAACAAACCACATTCCTCACCCATAggctttttttcctctttgagGAAAAAGgtgcataataataattgctaTAATTAAAGTGTCAACACGAAAGCTGCAACACGGAAACACTGATAGAAATTCTTTAAAAGGcaaagaatgtaaaaatgtgcacgaacacacacacacacacacacacacacactttctaaaCATTCTCCCAGGGTCCCCTATCTTTTAAGGTCATGTCTGGGCTGTAAAATAGAATGTTGTTGTCTTCATCGTCAGAATCGGAGTGTGTATCAAGGTCATGTGTGTATCTTACATTTGCAGCGTGGTACTCTCTAATTCTTGTGCTGGCACACAGTCGAGACTGAATAGCAA
>TU102285
CTGTCCACTCGTGTCGGTAGCTTTAtagtttaaagtgttttattattgcaaaataaaaacactttggCGTTTTTAATCACTGATTTAAATTTGACCTTTTATAACCTTCTTATAAAGCAGTTCATGGGAAAGCTCCTACTTAACAAGGCTTTCTGGTTAATCATCCTGACTTAAGCACTAAGAGACTCAAAATTTAGACTTAATTAACTTGAACTCAAAGTTGATTAGCTGATTAACTGAAGTTAATGAGTGCCAGCTCTTTCTACTAgacaaaagacacaaacacgacataaatgtttttagatttgtatttaaaattagttGAGTCcgcaaacaatacaaaaatatagcatacattttcataaatacaatattaaaacatgctcaaacattttaaaagtctgAAATACTCAGCTGAATGAATTGGAAAAGGCAgtctttaattacattatatacaacAAAGATTATTTTGAAGTGGTGAATTGCTCGATTTAAAGCTTTTCCACTttaatacagtacaaaaaaaaaaacaacaacttatgCTTTTACCCGTCATTAACAGCAAAGAAAGACATACTATCAACcattttctttcctgttttccAACTATCCACATTTTTCTTGATGTAAAAATAGGCACCATTTGTAAATTTCACCAATCTAGCTCCAGGTCTCAACCAcgtccagctatttttaactGTTCAAGAGTTCATTTttctgcttgatattgaaaataagcgtcttatgttatttaaatgtatcatcattcattatgaacacactggtttgtagtgcaaacagttttactgttttatgcaCGTTGTTATTTTCCACGTTATGTACCTATGCCGTCTAACAAACCACATTCCTCACCCATAggctttttttcctctttgagGAAAAAGgtgcataataataattgctaTAATTAAAGTGTCAACACGAAAGCTGCAACACGGAAACACTGATAGAAATTCTTTAAAAGGcaaagaatgtaaaaatgtgcacgaacacacacacacacacacacacacacacacacacacacacacacacacacacacaca
>TU102286
ttttttttgtttttagactggactgttttattaattttttttgccattacaAAATAAGAAATCTTGTAAAGAGTGTCAGCTGTTACTGTTACTGACAGCGATATGTCTTCAGCTAGTGTACAGTCAGTTAGTTGATGATTATAAACACAAAAGCTGCAGGTAAACATCAGATCTGAATCGCCCCTGAAGAAGAGGTTGATAAACAGACCTTCACAAACTACAGCTGATGGgaaacaagagagaaagagacaaaggGAAATGAAGAGCGAGTGTTTGCATCTAAGAACAAAAGGTCACGCAGAGCAAAACTGGACTGATGTCAGATTTCTACCACAATCCCTTCTACTGGTAAAATCCAAATTTAAAGGACAAGCTTAGATGACCATCCAGCATCCAAAACTCTAGCAATGCTGTTTTTTCATCTTCCATTGTGCCCAGATTTGCTTCTGCGTGACCTTTACCCTAGGGAACCATATTTTTGTACAGTTGTCTCCGTAGATGCAGATGACCCAGCAGGACCCTTAGGCTCTGGAGCGGACAATGCCGCATGGCGCTGTTCCTTTAGCCAGACTACATGGTGTGAGCACAGGTTGTTCTGTCTGCTCTCCCTCTGTAAGGGCGGCGCGGATCTTGCGCACCACGTAGGCACCGGCTGTAtggaaaaatgtaacaaatcaTACGTAAGCGGTTCACAAAACATCAGTCatgatacaaac

Function

GO:

id name namespace
GO:0030120 vesicle coat cellular_component
GO:0030126 COPI vesicle coat cellular_component
GO:0030137 COPI-coated vesicle cellular_component
GO:0005794 Golgi apparatus cellular_component
GO:0030660 Golgi-associated vesicle membrane cellular_component
GO:0030662 coated vesicle membrane cellular_component
GO:0030663 COPI-coated vesicle membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU102283 True 1677 lncRNA 0.38 3 10171769 10174858
TU102285 False 1067 lncRNA 0.33 2 10117793 10172985
TU102286 False 716 lncRNA 0.43 3 10173936 10242212

Neighbor

gene id symbol gene type direction distance location
LOC122351802 NA coding downstream 16065 10098080 ~ 10101728 (-)
LOC122351801 NA coding downstream 21549 10092350 ~ 10096244 (-)
gja5a cx45.6,LOC107663873,LOC107748213,LOC107572527,LOC107720145,LOC107655501,LOC107600426 coding downstream 46908 10060318 ~ 10070885 (-)
acp6 acp6,LOC107748216,LOC107572529,LOC107663850,LOC107720144,LOC107600425,LOC107655526 coding downstream 60033 10051625 ~ 10057760 (-)
LOC122351281 LOC107707767,LOC107663877 coding downstream 124321 9990190 ~ 9993472 (-)
tmem30c tmem30c,LOC107655489,LOC107706099,LOC107720155,LOC107555223,LOC107600433,LOC107663858 coding upstream 36646 10278858 ~ 10284622 (-)
cmss1 cmss1 coding upstream 42814 10285026 ~ 10289515 (-)
LOC122351326 LOC107706086,LOC107555206,LOC107663846,LOC107720148,LOC107655485,LOC107600435 coding upstream 166547 10408759 ~ 10411514 (-)
rnaseh2b rnaseh2b,LOC107663845,LOC107555203,LOC107720151,LOC107655484,LOC107706085,LOC107600411 coding upstream 174044 10416256 ~ 10419386 (-)
LOC122351939 LOC107720137 coding upstream 204768 10446980 ~ 10462522 (-)
G69136 LOC107555234,LOC107655498,LOC107748211,LOC107663925,LOC107720146,LOC107600385 non-coding downstream 7550 10108975 ~ 10110243 (-)
G69147 NA non-coding downstream 30771 10085433 ~ 10087022 (-)
G69018 NA non-coding downstream 171991 9913086 ~ 9945802 (-)
G69004 NA non-coding downstream 226197 9890651 ~ 9891596 (-)
G68994 NA non-coding downstream 444892 9672572 ~ 9672901 (-)
LOC122351639 NA non-coding upstream 11721 10253933 ~ 10263447 (-)
G69223 NA non-coding upstream 184015 10426227 ~ 10426465 (-)
G69228 NA non-coding upstream 202081 10444293 ~ 10444641 (-)
G69231 NA non-coding upstream 203065 10445277 ~ 10446767 (-)
G69346 NA non-coding upstream 595300 10837512 ~ 10844040 (-)
LOC122351483 LOC107663814,LOC107733620,LOC107555196,LOC107720141,LOC107600416,LOC107655476 other downstream 207615 9908188 ~ 9910178 (-)
als2a als2a,LOC107688763,LOC107596546,LOC107668398,LOC107752891,LOC107592992,LOC107738114 other downstream 2022946 8076468 ~ 8094847 (-)
LOC122351623 raph1,LOC107592998,LOC107668371,LOC107752894,LOC107738113,LOC107688760,LOC107738116,LOC107596536 other downstream 2093121 8014449 ~ 8024672 (-)
LOC122351350 cb064,LOC107688735,LOC107716767,LOC107676512,LOC108232354,LOC103042106,LOC105927538 other downstream 2963839 7070985 ~ 7153954 (-)
G68188 irs2b,LOC107715923,LOC107688717,LOC107559513,LOC107557930,LOC107721603,LOC107702923 other downstream 3856724 6246900 ~ 6261069 (-)
trim13 trim13,LOC107720128,LOC107555217,LOC107663864,LOC107706093,LOC107600394,LOC107655513 other upstream 191295 10433507 ~ 10443619 (-)
fdx1 fdx1,LOC107663820,LOC107706088,LOC107720152,LOC107655504,LOC107600437,LOC107555213,LOC107655505 other upstream 273060 10515272 ~ 10519457 (-)
mrasa LOC107551943,LOC107663912,LOC107733654,LOC107600440,LOC107738526 other upstream 437946 10680158 ~ 10686627 (-)
LOC122351858 slc10a2,LOC107663831,LOC107567642,LOC107675341,LOC107738529 other upstream 1154454 11396666 ~ 11493120 (-)
LOC122351308 si:rp71-84d19.3,gtpbp8,LOC107663822,LOC107567641,LOC107738531,LOC107733632,LOC107598183 other upstream 1254735 11496947 ~ 11500495 (-)

Expression


Co-expression Network