G69340 (LOC107733630,LOC107551942,LOC107663909)


Basic Information

Item Value
gene id G69340
gene name LOC107733630,LOC107551942,LOC107663909
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 10833788 ~ 10834682 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU102528
GATGTTGTTCTCTCCAGCAGCGCGGTTGCAGCACTCGGATCGGCTCTGAGATAGGCTTGGTACATGGAGAAGGTCTGAATAAAACCAATTAAATTCTTGATGCTCAGCTGCTTCCTTACTGGAATTATTTCAATTCTCTTTTTCTGGGAAGGGTATGGCTTCAAATAAGTCCTTTAGCTTGCTGTTGGCCCCAGTTACCCTACTGCTCGTATAAGGCAGCAGTATTTGCTTTACCTTGCAGGATAAATTATGCAAGTGTGCAGTTATCAGTTATTATACGCATATTTAACCTTGATAAACATGCATTCATTAAGCTAAAGATTTGGCATGTACATATTAAACAGTGCTCATTTACTAAACCTGTACTCTAGATACTCATTGTATTCATTGATTTATCTATACATATGCAATAGGCTTACGTCCTCATATATGTTATTAAGTCGATCACCACAGGATTCGTAGTGTATTTTCAGATTGTCTCCATAGCCAAGGAGAGCCAAGCAGCCACGTGGCTTCAGGACACGTGCAGCCTCCTTTAAGAAACGCTCGGTGTCAAACCAATGAGCTGCAGACGCAGCCGTCAGCAGGTCTACTGAGCCATCCGGGAATGGCAGCTCCTCTGCTGT

Function

NR:

description
PREDICTED: putative methyltransferase DDB_G0268948

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU102528 True 626 lncRNA 0.43 2 10833788 10834682

Neighbor

gene id symbol gene type direction distance location
ramp1 ramp1,zgc:91818,LOC107733653,LOC107738500,LOC100007315 coding upstream 52535 10757241 ~ 10781253 (+)
epb41l5 LOC107733640,LOC107663871,LOC107738499,LOC107551945 coding upstream 77903 10729162 ~ 10755885 (+)
ptpn4a LOC107733639,LOC107738498,LOC107700215,LOC107551944,LOC107663857 coding upstream 105700 10689848 ~ 10728088 (+)
tmem177 LOC107663823,LOC107738527,LOC107700213,LOC107579880,LOC107577552,LOC107600419 coding upstream 145000 10687317 ~ 10688788 (+)
pth2ra pth2r,LOC107733633,LOC107663806 coding upstream 163689 10628143 ~ 10670099 (+)
LOC122352014 LOC107733623 coding downstream 1406 10836088 ~ 10839687 (+)
LOC122352013 LOC107733623 coding downstream 7758 10842440 ~ 10849801 (+)
klf7b klf7b,klf7,LOC107738504,LOC107598162,LOC107733646,LOC107700220,LOC107663863,LOC107551946 coding downstream 119510 10954192 ~ 10996056 (+)
ccnyl1 ccnyl1,LOC107733650,LOC107663902,LOC107698526,LOC107738507 coding downstream 196766 11031448 ~ 11040958 (+)
kcnh3 kcnh3,LOC107663882,LOC107733652,LOC107551953,LOC107598168,LOC107738522,LOC107698521,LOC108430476,LOC108266388,LOC105016302 coding downstream 264362 11099044 ~ 11192927 (+)
LOC122351147 NA non-coding upstream 19169 10803860 ~ 10814619 (+)
G69286 NA non-coding upstream 47326 10786176 ~ 10786462 (+)
G69285 NA non-coding upstream 49189 10784362 ~ 10784599 (+)
G69284 NA non-coding upstream 50086 10783465 ~ 10783702 (+)
G69109 LOC107555213,LOC107706088,LOC107663820,LOC107720152,LOC107600437,LOC107655505,LOC107655504 non-coding upstream 317456 10515306 ~ 10516332 (+)
G69355 NA non-coding downstream 88467 10923149 ~ 10923477 (+)
G69358 NA non-coding downstream 106626 10941308 ~ 10941524 (+)
G69403 NA non-coding downstream 228919 11063601 ~ 11090434 (+)
G69417 armc8,LOC107733643,LOC107663904,LOC107551954 non-coding downstream 365969 11200651 ~ 11201165 (+)
G69459 NA non-coding downstream 410469 11245151 ~ 11245478 (+)
il1rapl1a il1rapl1a,LOC107655515,LOC107600393,LOC107663843,LOC107555221,LOC107706095 other upstream 438558 10328731 ~ 10395230 (+)
si:dkey-100n23.5 LOC107748207,LOC107555230,LOC107720121,LOC107655523 other upstream 659005 10167336 ~ 10174783 (+)
piga piga,LOC107748211,LOC107555234,LOC107663925,LOC107655498,LOC107600385,LOC107720146 other upstream 720432 10092350 ~ 10113356 (+)
thsd7ba thsd7b,thsd7ba,LOC107663893,LOC107751610,LOC107720322,LOC107658187,LOC107658188,LOC107558036 other upstream 1266791 9443125 ~ 9566997 (+)
LOC122351827 LOC107568346,LOC107676221,LOC566927,LOC107706103,LOC107706102,LOC108412955 other upstream 1672967 9156045 ~ 9160821 (+)
creb1b creb1b,creb1,LOC107598164,LOC107738506,LOC107698524,LOC107663917 other downstream 187054 11021736 ~ 11030409 (+)
LOC122352020 uggt2,LOC107600415,LOC107720140,LOC107663813,LOC107655477,LOC108430493,LOC107706079,LOC108266228 other downstream 630922 11465604 ~ 11490149 (+)
G69527 arhgap15,LOC107563181,LOC107673132,LOC107709415,LOC107555858,LOC107675340,LOC107711394 other downstream 1211817 12046499 ~ 12155804 (+)
epc2 epc2,itm2b,LOC107709422,LOC107724031,LOC107675331,LOC107673124,LOC107709423 other downstream 1600306 12434988 ~ 12452365 (+)
G69670 LOC107673130,LOC107555834,LOC107709428,LOC107724029,LOC107675357 other downstream 1792853 12627535 ~ 12629535 (+)

Expression


Co-expression Network