creb1b (creb1b,creb1,LOC107598164,LOC107738506,LOC107698524,LOC107663917)


Basic Information

Item Value
gene id creb1b
gene name creb1b,creb1,LOC107598164,LOC107738506,LOC107698524,LOC107663917
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 11021736 ~ 11030409 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU102581
TTTCATTTTTCCTTTGTTGACGTTGAGTTGCTTCGGAAACTACAAGAAACAACTGAACAGTTAAACAATTGCCTTTGTCAACGCAAGttgtattttgtttacaaaGTTGTCTCTGTTGACCCAAACTGTTTAAGGCTTTTGATGATTTGTCAATgacttttaaagttgtttaaaagcaaaaggGTTTCACGTTTTGCGTATGTTTTGCACTGAGGACAGAAAGTTTTAAATGAGATGTTAGCGGactatgaattaaaaatgcccATCAACAACGCCAGTCTGTGCTGAAAGGTGCCCGTGTTGGCGAGTGCATCATCTGCTGCTACTCTTAAACTTCGAACCGTCTGCCTGACGTGTCATTTACGCATTCAGGCGTAACAAATTAGGGAAGCAATCTCTCCACAGCAGGCGCTCACGGTCCAGATCTGCAGTCTAACTGCTTATGCAAGCTGACATGCAACCCGATTTCCCTCACAGAACCAATTATTTTCTGACACAAGAATCTGAATTGACTCATCGAAGGACAGACTGACCTCAGCTTTCAGAGAAATGCAAATTCTGTCTGTTTTCAGTGATAgaatctttattcatttttctgaactgacattaccttttttttttttctttttttttttttctccactctTGTGTGTACCCCGTATGCAATGAGATTGACCTACTGCCATGCTGGCCAAAGTGAACTCCAAAATATGCGACTGTGTATGTTTGTCTTCATGCGTACAAAAGACCAATCAATCTAAAGCAATGTTTGATCCCACTCATTTTGGACAAACACGTCATGCACTTTTTGTATGATAGCTTTCACCTTTTGGACACTATGTACAAAACTGGTAGGATTTTATAGTGTTTCAAAGGTTTAAAAGTGTATTGTATATACTCTGTGACTTGGCTTACATTTTTAGAAGCTTTGCACTCTATTACTGTTAAAACACTTATGTATACTTGTTGTTGTTCCCCCACCTCCGTTTTGTATACAAATGtaaatctttaataaaatactaa
>XM_043249647.1
AGTGCAGTGGGGTTGATGATCGGATTTTCGTCTCGTTCTCTGTGTTGTTGTTCTCGGTGACGCGACGGAGGTGTAGCCTGACGCGGTCTCTTACGTGTCGGCCTGAATAAAAGTGGAGCTCCGAGGGCTCGAGAGTGACGGAGGGAGTCTGTATCGATTTCTGCAGTGACGGAGAGTGAAGGCTTACCAGAGTCAGTGGACGTGTGAAAATTTTGTCTCTTATAGCTAACTCGATGACCATGGAGTCGGGAGCCGATGCCCAGCAGGGTGCAGACACCGCGGTCTCCGAAACTGAGAACCAACAGATCACACAGGCCCAAATCGCCACTCTTGCACAGGTAACGATGGCTGCCGGACACGCTAGTGCCACGGCACCCACAGTCACCCTGGTGCAGCTGCCCAATGGCCAGACAGTACAGGTGCACGGAGTGATTCAAGCTGCTCAACCTTCAGTCATTCAATCACCACAGGTGCAGACTGTCCAGATTTCTACAGTAGCGGAGAGTGAGGACTCACAGGAGTCGGTGGACAGCGTGACGGACTCTCAGAAACGAAGAGAGATCCTTTCTAGACGCCCCTCATATAGGAAAATCCTGAATGACCTGTCATCAGACGCTCCAGGAGTTCCGAGAATCGAAGAGGAGAAATCCGAGGAGGACGCAGCGCCTGCCATCACTACAGTGACCGTGCCAACTCCAATATATCAGACCAGCAGCGGCCAGTACATCGCCATTACACAGGGTGGAGCCATTCAGCTGGCAAATAATGGTACAGATGGAGTGCAAGGATTGCAGACTCTCACCATGACCAATGCCGCAGCAGCCCAGCCGGGGACCACTATCCTGCAGTACGCCCAGACCAGTGACGGTCAACAGATACTGGTGCCCAGCAATCAAGTGGTGGTACAAGCTGCTTCTGGAGATGTTCAGGCCTATCAAATCCGAACTGCCCCAACCAGCACAATTGCTCCAGGTGTGGTCATGGCATCTTCTCCAGCCCTGCCAAGTCAAGGAGGGGCTGAAGAGGCCACGCGTAAGAGGGAGGTACGCCTCATGAagaacagAGAGGCAGCTCGTGAGTGCCGCCGAAAGAAAAAGGAATACGTCAAGTGTCTGGAGAACCGTGTGGCTGTTTTGGAGAACCAGAACAAAACTCTCATCGAGGAACTCAAAGCACTCAAAGACCTGTACTGTCACAAATCAGAGTGACGTACCACCCTCTCTCCCTACGTTCTGGCAGACTTACGTGTACAGAGACTAAAGGGCGAGCCGGCCAGACGCGGACGCatgttttctaaatgttttcttattttaaattgctgcAGACTGCCTGTATGAACACACAAGTACATGAGGGAACCGAACACAAGCCCCTCGTCAACACAAATCTCCTCTAGAAATATTGGATCATgtcattaaagacaaaaaaaaatgctgaaaacctTACTGTGgacataaaaacacaagtaCGTTCTCAGCCGTCTTTACTTCTGGACTCAAACCGAAACTCAGAGGAGGGGTTTGTGGGAAAATGTTTACCTTTTCTTCCAGTGTGCTGGTGTATATTTCatcagtgatttttaaaagagataaaaaaaaattatgtacaaTAATAATTTCACTGGCATTTCAGTAGTATGGTAGGCATCGAGAAAGATTTCGTCTTGGAGTTGGCATCATTCCCTCTTGAGATTTTAAAGGTTTAACGTGTCTGACTGTTACTTTTATTTGGTGTAAAGTGATCTCGTGTTTTAAGTTgacatttttacctttaaatatgaacaaactaTATAGAATTATGAAAGCTGATTTCCAGAATCTATGCCAtttataaacagaaatattgtgtATTGTATACAGAACAAGATTATAGCCCATGTACATTTCCAGTTtgacattttgcttattttagaTGACAAAAATGTACCTAAATCTTTTAATTTCATACAATACTGCCTTTGCAGTAGCAACGGTTGCACAAACACAGTataaaaaggtcatttttatcGCAGGCATTTGGTCACTTATACACCAAAACTCACCTTACAGTGACAGGAATTGCtcaagtgatttttaaaagtatattttcagGTTAAACGTTTCTTTACGTTTATATTGATCATATTCGGCAGATCACTTTTGTGTTATGCTTGTGTATCATAGAGCTATAATTGGATGAAATACAATCCAATACATTCTATCTCTGGCATTATaaactaaagcatgttttataaatattacataagcTTTGATATTGTTATATGgtcaatttttcatttcaacacTAACTGGGAGGCAGTGTCTTTGTATTTGATAATGTGATAACATAAGTAAAGAGTACATGTTATCTATTATAGCATATGCATTTTTGGcagctatttatatatatatatatatatatatatatatatatatatatatatatatatatatatataaagatatgtTAAAAGGATTTCTCTTGGTTTCATTTTTCCTTTGTTGACGTTGAGTTGCTTCGGAAACTACAAGAAACAACTGAACAGTTAAACAATTGCCTTTGTCAACGCAAGttgtattttgtttacaaaGTTGTCTCTGTTGACCCAAACTGTTTAAGGCTTTTGATGATTTGTCAATgacttttaaagttgtttaaaagcaaaaggGTTTCACGTTTTGCGTATGTTTTGCACTGAGGACAGAAAGTTTTAAATGAGATGTTAGCGGactatgaattaaaaatgcccATCAACAACGCCAGTCTGTGCTGAAAGGTGCCCGTGTTGGCGAGTGCATCATCTGCTGCTACTCTTAAACTTCGAACCGTCTGCCTGACGTGTCATTTACGCATTCAGGCGTAACAAATTAGGGAAGCAATCTCTCCACAGCAGGCGCTCACGGTCCAGATCTGCAGTCTAACTGCTTATGCAAGCTGACATGCAACCCGATTTCCCTCACAGAACCAATTATTTTCTGACACAAGAATCTGAATTGACTCATCGAAGGACAGACTGACCTCAGCTTTCAGAGAAATGCAAATTCTGTCTGTTTTCAGTGATAgaatctttattcatttttctgaactgacattaccttttttttttttctttttttttttttctccactctTGTGTGTACCCCGTATGCAATGAGATTGACCTACTGCCATGCTGGCCAAAGTGAACTCCAAAATATGCGACTGTGTATGTTTGTCTTCATGCGTACAAAAGACCAATCAATCTAAAGCAATGTTTGATCCCACTCATTTTGGACAAACACGTCATGCACTTTTTGTATGATAGCTTTCACCTTTTGGACACTATGTACAAAACTGGTAGGATTTTATAGTGTTTCAAAGGTTTAAAAGTGTATTGTATATACTCTGTGACTTGGCTTACATTTTTAGAAGCTTTGCACTCTATTACTGTTAAAACACTTATGTATACTTGTTGTTGTTCCCCCACCTCCGTTTTGTATACAAATGtaaatctttaataaaatactaatactgCA
>XM_043249648.1
GCTCGTCCCGAATGGCATAAGAGTCTGGTTTGGGTTCGGCCCGTTGGAAACAAAGAGATCATGGCGGCTGTAGTTGTTGCATGCAGAGGGAGGGGAGGCAAACGGCAGAGCAACACAAACCCAGGATTTCTGCAGTGACGGAGAGTGAAGGCTTACCAGAGTCAGTGGACGTGTGAAAATTTTGTCTCTTATAGCTAACTCGATGACCATGGAGTCGGGAGCCGATGCCCAGCAGGGTGCAGACACCGCGGTCTCCGAAACTGAGAACCAACAGATCACACAGGCCCAAATCGCCACTCTTGCACAGGTAACGATGGCTGCCGGACACGCTAGTGCCACGGCACCCACAGTCACCCTGGTGCAGCTGCCCAATGGCCAGACAGTACAGGTGCACGGAGTGATTCAAGCTGCTCAACCTTCAGTCATTCAATCACCACAGGTGCAGACTGTCCAGATTTCTACAGTAGCGGAGAGTGAGGACTCACAGGAGTCGGTGGACAGCGTGACGGACTCTCAGAAACGAAGAGAGATCCTTTCTAGACGCCCCTCATATAGGAAAATCCTGAATGACCTGTCATCAGACGCTCCAGGAGTTCCGAGAATCGAAGAGGAGAAATCCGAGGAGGACGCAGCGCCTGCCATCACTACAGTGACCGTGCCAACTCCAATATATCAGACCAGCAGCGGCCAGTACATCGCCATTACACAGGGTGGAGCCATTCAGCTGGCAAATAATGGTACAGATGGAGTGCAAGGATTGCAGACTCTCACCATGACCAATGCCGCAGCAGCCCAGCCGGGGACCACTATCCTGCAGTACGCCCAGACCAGTGACGGTCAACAGATACTGGTGCCCAGCAATCAAGTGGTGGTACAAGCTGCTTCTGGAGATGTTCAGGCCTATCAAATCCGAACTGCCCCAACCAGCACAATTGCTCCAGGTGTGGTCATGGCATCTTCTCCAGCCCTGCCAAGTCAAGGAGGGGCTGAAGAGGCCACGCGTAAGAGGGAGGTACGCCTCATGAagaacagAGAGGCAGCTCGTGAGTGCCGCCGAAAGAAAAAGGAATACGTCAAGTGTCTGGAGAACCGTGTGGCTGTTTTGGAGAACCAGAACAAAACTCTCATCGAGGAACTCAAAGCACTCAAAGACCTGTACTGTCACAAATCAGAGTGACGTACCACCCTCTCTCCCTACGTTCTGGCAGACTTACGTGTACAGAGACTAAAGGGCGAGCCGGCCAGACGCGGACGCatgttttctaaatgttttcttattttaaattgctgcAGACTGCCTGTATGAACACACAAGTACATGAGGGAACCGAACACAAGCCCCTCGTCAACACAAATCTCCTCTAGAAATATTGGATCATgtcattaaagacaaaaaaaaatgctgaaaacctTACTGTGgacataaaaacacaagtaCGTTCTCAGCCGTCTTTACTTCTGGACTCAAACCGAAACTCAGAGGAGGGGTTTGTGGGAAAATGTTTACCTTTTCTTCCAGTGTGCTGGTGTATATTTCatcagtgatttttaaaagagataaaaaaaaattatgtacaaTAATAATTTCACTGGCATTTCAGTAGTATGGTAGGCATCGAGAAAGATTTCGTCTTGGAGTTGGCATCATTCCCTCTTGAGATTTTAAAGGTTTAACGTGTCTGACTGTTACTTTTATTTGGTGTAAAGTGATCTCGTGTTTTAAGTTgacatttttacctttaaatatgaacaaactaTATAGAATTATGAAAGCTGATTTCCAGAATCTATGCCAtttataaacagaaatattgtgtATTGTATACAGAACAAGATTATAGCCCATGTACATTTCCAGTTtgacattttgcttattttagaTGACAAAAATGTACCTAAATCTTTTAATTTCATACAATACTGCCTTTGCAGTAGCAACGGTTGCACAAACACAGTataaaaaggtcatttttatcGCAGGCATTTGGTCACTTATACACCAAAACTCACCTTACAGTGACAGGAATTGCtcaagtgatttttaaaagtatattttcagGTTAAACGTTTCTTTACGTTTATATTGATCATATTCGGCAGATCACTTTTGTGTTATGCTTGTGTATCATAGAGCTATAATTGGATGAAATACAATCCAATACATTCTATCTCTGGCATTATaaactaaagcatgttttataaatattacataagcTTTGATATTGTTATATGgtcaatttttcatttcaacacTAACTGGGAGGCAGTGTCTTTGTATTTGATAATGTGATAACATAAGTAAAGAGTACATGTTATCTATTATAGCATATGCATTTTTGGcagctatttatatatatatatatatatatatatatatatatatatatatatatatatatatatataaagatatgtTAAAAGGATTTCTCTTGGTTTCATTTTTCCTTTGTTGACGTTGAGTTGCTTCGGAAACTACAAGAAACAACTGAACAGTTAAACAATTGCCTTTGTCAACGCAAGttgtattttgtttacaaaGTTGTCTCTGTTGACCCAAACTGTTTAAGGCTTTTGATGATTTGTCAATgacttttaaagttgtttaaaagcaaaaggGTTTCACGTTTTGCGTATGTTTTGCACTGAGGACAGAAAGTTTTAAATGAGATGTTAGCGGactatgaattaaaaatgcccATCAACAACGCCAGTCTGTGCTGAAAGGTGCCCGTGTTGGCGAGTGCATCATCTGCTGCTACTCTTAAACTTCGAACCGTCTGCCTGACGTGTCATTTACGCATTCAGGCGTAACAAATTAGGGAAGCAATCTCTCCACAGCAGGCGCTCACGGTCCAGATCTGCAGTCTAACTGCTTATGCAAGCTGACATGCAACCCGATTTCCCTCACAGAACCAATTATTTTCTGACACAAGAATCTGAATTGACTCATCGAAGGACAGACTGACCTCAGCTTTCAGAGAAATGCAAATTCTGTCTGTTTTCAGTGATAgaatctttattcatttttctgaactgacattaccttttttttttttctttttttttttttctccactctTGTGTGTACCCCGTATGCAATGAGATTGACCTACTGCCATGCTGGCCAAAGTGAACTCCAAAATATGCGACTGTGTATGTTTGTCTTCATGCGTACAAAAGACCAATCAATCTAAAGCAATGTTTGATCCCACTCATTTTGGACAAACACGTCATGCACTTTTTGTATGATAGCTTTCACCTTTTGGACACTATGTACAAAACTGGTAGGATTTTATAGTGTTTCAAAGGTTTAAAAGTGTATTGTATATACTCTGTGACTTGGCTTACATTTTTAGAAGCTTTGCACTCTATTACTGTTAAAACACTTATGTATACTTGTTGTTGTTCCCCCACCTCCGTTTTGTATACAAATGtaaatctttaataaaatactaatactgCA

Function

symbol description
creb1b Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and cAMP response element binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to act upstream of or within regulation of transcription, DNA-templated. Predicted to be located in nucleus. Predicted to be part of ATF4-CREB1 transcription factor complex. Orthologous to human CREB1 (cAMP responsive element binding protein 1).
creb1 Enables several functions, including DNA-binding transcription activator activity, RNA polymerase II-specific; cAMP response element binding activity; and identical protein binding activity. Involved in negative regulation of transcription by competitive promoter binding activity. Acts upstream of or within positive regulation of transcription by RNA polymerase II; protein phosphorylation; and response to organic substance. Located in euchromatin and nucleoplasm. Part of ATF4-CREB1 transcription factor complex. Biomarker of Pick's disease and schizophrenia.

NR:

description
PREDICTED: cyclic AMP-responsive element-binding protein 1 isoform X3

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0005634 nucleus cellular_component
GO:0003677 DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function

KEGG:

id description
K05870 CREB1; cyclic AMP-responsive element-binding protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
TU102581 False 1023 lncRNA 0.38 1 11029380 11030402
XM_043249647.1 True 3494 mRNA 0.42 9 11021736 11030409
XM_043249648.1 False 3463 mRNA 0.41 9 11021923 11030409

Neighbor

gene id symbol gene type direction distance location
klf7b klf7b,klf7,LOC107738504,LOC107598162,LOC107733646,LOC107700220,LOC107663863,LOC107551946 coding upstream 25680 10954192 ~ 10996056 (+)
LOC122352013 LOC107733623 coding upstream 171935 10842440 ~ 10849801 (+)
LOC122352014 LOC107733623 coding upstream 182049 10836088 ~ 10839687 (+)
ramp1 ramp1,zgc:91818,LOC107733653,LOC107738500,LOC100007315 coding upstream 240483 10757241 ~ 10781253 (+)
epb41l5 LOC107733640,LOC107663871,LOC107738499,LOC107551945 coding upstream 265851 10729162 ~ 10755885 (+)
ccnyl1 ccnyl1,LOC107733650,LOC107663902,LOC107698526,LOC107738507 coding downstream 1039 11031448 ~ 11040958 (+)
kcnh3 kcnh3,LOC107663882,LOC107733652,LOC107551953,LOC107598168,LOC107738522,LOC107698521,LOC108430476,LOC108266388,LOC105016302 coding downstream 68635 11099044 ~ 11192927 (+)
dbr1 dbr1,LOC107733644,LOC107738510,LOC107663903,LOC107598170,LOC107698529,LOC107551939 coding downstream 175428 11205837 ~ 11209581 (+)
tbccd1 tbccd1,LOC107551957,LOC107663868,LOC107733647,LOC107738513,LOC107698532,LOC107598171 coding downstream 186723 11217132 ~ 11222171 (+)
crygs2 crygs2,LOC107663869,LOC107551958,LOC107733648,LOC107598173,LOC107698534 coding downstream 194139 11224548 ~ 11225833 (+)
G69358 NA non-coding upstream 80212 10941308 ~ 10941524 (+)
G69355 NA non-coding upstream 98259 10923149 ~ 10923477 (+)
G69340 LOC107733630,LOC107551942,LOC107663909 non-coding upstream 187054 10833788 ~ 10834682 (+)
LOC122351147 NA non-coding upstream 207117 10803860 ~ 10814619 (+)
G69286 NA non-coding upstream 235274 10786176 ~ 10786462 (+)
G69403 NA non-coding downstream 33192 11063601 ~ 11090434 (+)
G69417 armc8,LOC107733643,LOC107663904,LOC107551954 non-coding downstream 170242 11200651 ~ 11201165 (+)
G69459 NA non-coding downstream 214742 11245151 ~ 11245478 (+)
G69483 NA non-coding downstream 389796 11420205 ~ 11423317 (+)
G69518 NA non-coding downstream 949372 11979781 ~ 12009922 (+)
il1rapl1a il1rapl1a,LOC107655515,LOC107600393,LOC107663843,LOC107555221,LOC107706095 other upstream 626506 10328731 ~ 10395230 (+)
si:dkey-100n23.5 LOC107748207,LOC107555230,LOC107720121,LOC107655523 other upstream 846953 10167336 ~ 10174783 (+)
piga piga,LOC107748211,LOC107555234,LOC107663925,LOC107655498,LOC107600385,LOC107720146 other upstream 908380 10092350 ~ 10113356 (+)
thsd7ba thsd7b,thsd7ba,LOC107663893,LOC107751610,LOC107720322,LOC107658187,LOC107658188,LOC107558036 other upstream 1454739 9443125 ~ 9566997 (+)
LOC122351827 LOC107568346,LOC107676221,LOC566927,LOC107706103,LOC107706102,LOC108412955 other upstream 1860915 9156045 ~ 9160821 (+)
LOC122352020 uggt2,LOC107600415,LOC107720140,LOC107663813,LOC107655477,LOC108430493,LOC107706079,LOC108266228 other downstream 435195 11465604 ~ 11490149 (+)
G69527 arhgap15,LOC107563181,LOC107673132,LOC107709415,LOC107555858,LOC107675340,LOC107711394 other downstream 1016090 12046499 ~ 12155804 (+)
epc2 epc2,itm2b,LOC107709422,LOC107724031,LOC107675331,LOC107673124,LOC107709423 other downstream 1404579 12434988 ~ 12452365 (+)
G69670 LOC107673130,LOC107555834,LOC107709428,LOC107724029,LOC107675357 other downstream 1597126 12627535 ~ 12629535 (+)
LOC122351618 clasp1a,clasp2,LOC107741904,LOC107714287,LOC107673735,LOC107596084,LOC107706129,LOC107696541,LOC107669402 other downstream 1701889 12732298 ~ 12803408 (+)

Expression


Co-expression Network