G69417 (armc8,LOC107733643,LOC107663904,LOC107551954)


Basic Information

Item Value
gene id G69417
gene name armc8,LOC107733643,LOC107663904,LOC107551954
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 11200651 ~ 11201165 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU102659
GACCTTGCAGCAGGGCTGGGATGATGTGACAGTCCACCAGGGACTTGATGTTGTTCTCTGTGCCCATTGCCAGGCTGCCCAACACGACCGCACATTCAGTCCTGAGCTCCAGGCTAGAGGAGCTCTGCTGGAGAAGATACAggagtCTTGGCACGGCTCCGAGCACAATCAGGTTGGCCTTCTGTTTGTTGTTTCCGATGACAGCATTCTTCATGTCACTGTCAATA

Function

symbol description
armc8 Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process. Predicted to be located in cytoplasm and nucleus. Predicted to be part of GID complex and ubiquitin ligase complex. Orthologous to human ARMC8 (armadillo repeat containing 8).

NR:

description
PREDICTED: armadillo repeat-containing protein 8

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU102659 True 227 lncRNA 0.54 2 11200651 11201165

Neighbor

gene id symbol gene type direction distance location
kcnh3 kcnh3,LOC107663882,LOC107733652,LOC107551953,LOC107598168,LOC107738522,LOC107698521,LOC108430476,LOC108266388,LOC105016302 coding upstream 7724 11099044 ~ 11192927 (+)
ccnyl1 ccnyl1,LOC107733650,LOC107663902,LOC107698526,LOC107738507 coding upstream 159693 11031448 ~ 11040958 (+)
klf7b klf7b,klf7,LOC107738504,LOC107598162,LOC107733646,LOC107700220,LOC107663863,LOC107551946 coding upstream 204595 10954192 ~ 10996056 (+)
LOC122352013 LOC107733623 coding upstream 350850 10842440 ~ 10849801 (+)
LOC122352014 LOC107733623 coding upstream 360964 10836088 ~ 10839687 (+)
dbr1 dbr1,LOC107733644,LOC107738510,LOC107663903,LOC107598170,LOC107698529,LOC107551939 coding downstream 4672 11205837 ~ 11209581 (+)
tbccd1 tbccd1,LOC107551957,LOC107663868,LOC107733647,LOC107738513,LOC107698532,LOC107598171 coding downstream 15967 11217132 ~ 11222171 (+)
crygs2 crygs2,LOC107663869,LOC107551958,LOC107733648,LOC107598173,LOC107698534 coding downstream 23383 11224548 ~ 11225833 (+)
gtf2e1 gtf2e1,LOC107733656,LOC107738514 coding downstream 30842 11232007 ~ 11244430 (+)
stxbp5l stxbp5l,LOC107738516,LOC107663865,LOC107675353 coding downstream 62561 11263726 ~ 11372571 (+)
G69403 NA non-coding upstream 110217 11063601 ~ 11090434 (+)
G69358 NA non-coding upstream 259127 10941308 ~ 10941524 (+)
G69355 NA non-coding upstream 277174 10923149 ~ 10923477 (+)
G69340 LOC107733630,LOC107551942,LOC107663909 non-coding upstream 365969 10833788 ~ 10834682 (+)
LOC122351147 NA non-coding upstream 386032 10803860 ~ 10814619 (+)
G69459 NA non-coding downstream 43986 11245151 ~ 11245478 (+)
G69483 NA non-coding downstream 219040 11420205 ~ 11423317 (+)
G69518 NA non-coding downstream 778616 11979781 ~ 12009922 (+)
G69539 NA non-coding downstream 998769 12199934 ~ 12200597 (+)
G69578 NA non-coding downstream 1121086 12322251 ~ 12322532 (+)
creb1b creb1b,creb1,LOC107598164,LOC107738506,LOC107698524,LOC107663917 other upstream 170242 11021736 ~ 11030409 (+)
il1rapl1a il1rapl1a,LOC107655515,LOC107600393,LOC107663843,LOC107555221,LOC107706095 other upstream 805421 10328731 ~ 10395230 (+)
si:dkey-100n23.5 LOC107748207,LOC107555230,LOC107720121,LOC107655523 other upstream 1025868 10167336 ~ 10174783 (+)
piga piga,LOC107748211,LOC107555234,LOC107663925,LOC107655498,LOC107600385,LOC107720146 other upstream 1087295 10092350 ~ 10113356 (+)
thsd7ba thsd7b,thsd7ba,LOC107663893,LOC107751610,LOC107720322,LOC107658187,LOC107658188,LOC107558036 other upstream 1633654 9443125 ~ 9566997 (+)
LOC122352020 uggt2,LOC107600415,LOC107720140,LOC107663813,LOC107655477,LOC108430493,LOC107706079,LOC108266228 other downstream 264439 11465604 ~ 11490149 (+)
G69527 arhgap15,LOC107563181,LOC107673132,LOC107709415,LOC107555858,LOC107675340,LOC107711394 other downstream 845334 12046499 ~ 12155804 (+)
epc2 epc2,itm2b,LOC107709422,LOC107724031,LOC107675331,LOC107673124,LOC107709423 other downstream 1233823 12434988 ~ 12452365 (+)
G69670 LOC107673130,LOC107555834,LOC107709428,LOC107724029,LOC107675357 other downstream 1426370 12627535 ~ 12629535 (+)
LOC122351618 clasp1a,clasp2,LOC107741904,LOC107714287,LOC107673735,LOC107596084,LOC107706129,LOC107696541,LOC107669402 other downstream 1531133 12732298 ~ 12803408 (+)

Expression


Co-expression Network