G69643 (LOC106586327,LOC106582410)


Basic Information

Item Value
gene id G69643
gene name LOC106586327,LOC106582410
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 12404395 ~ 12404721 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU102988
aaaaacttcCAGTCATTTAATCAGGAATGGGCCTTTTTTCCTCACCACTTTAGTTATTTTCTTCACACTATCTTGGTTTTTTGGTAATGTCAAACAGGCATAAAACCACTAGAGATTACCTGTCATAGCAGTTGACATCATCAAGCCAGCAGCCTTGCTTTACTATTTCAACCGATCCTGACACATTTCGCCAAGTTGCAAAGCAATGAAGCCTCTTGTCCTTCTCACCCACGCAAGACTCGATACCGCTGCGATTTCCTCGGTTCTCTGAGCTGGGGTTGTAGTTGTAGAACACACACTCTTGTGTCTCTGATCGGCCGAGAATGG

Function

NR:

description
PREDICTED: activin receptor type-2A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU102988 True 327 lncRNA 0.44 1 12404395 12404721

Neighbor

gene id symbol gene type direction distance location
zeb2a zeb2a,LOC107711399,LOC107675348,LOC107563183 coding downstream 159607 12196754 ~ 12244788 (-)
arglu1a arglu1a,LOC107555859,LOC107673121,LOC107711396,LOC107577473,LOC107675355,LOC106586866 coding downstream 394458 12004004 ~ 12009937 (-)
efnb2a efnb2a,efnb2,LOC107555860,LOC107563180,LOC107675360,LOC105018709 coding downstream 403703 11982968 ~ 12000692 (-)
LOC122352021 hs6st3b,LOC107555209,LOC107733651,LOC107663930,LOC107600438,LOC107720131,LOC107655503 coding downstream 939981 11454069 ~ 11464414 (-)
gtpbp8 si:rp71-84d19.3,LOC107663822,LOC107567641,LOC107738531,LOC107733632,LOC107598183 coding downstream 1000099 11400551 ~ 11404296 (-)
itm2bb itm2bb,itm2b,LOC107673124,LOC107709423,LOC107601060 coding upstream 40831 12445552 ~ 12452338 (-)
slc39a10 slc39a10,LOC107673130,LOC107709428,LOC107724029,LOC107675357 coding upstream 214555 12619276 ~ 12640868 (-)
LOC122352069 hacd2,LOC107660639,LOC107741899,LOC107661144 coding upstream 318680 12723401 ~ 12729104 (-)
LOC122351488 pikfyve,LOC107731754,LOC107569979 coding upstream 409432 12814153 ~ 12815138 (-)
ftcdnl1 zgc:153901,LOC107555842,LOC107728290,LOC107670712 coding upstream 709782 13114503 ~ 13118222 (-)
G69642 NA non-coding downstream 7881 12396066 ~ 12396514 (-)
G69641 NA non-coding downstream 9395 12394771 ~ 12395000 (-)
G69640 NA non-coding downstream 10066 12394097 ~ 12394329 (-)
G69639 NA non-coding downstream 10921 12392313 ~ 12393474 (-)
LOC122351337 NA non-coding downstream 82575 12303714 ~ 12321820 (-)
G69644 NA non-coding upstream 1446 12406167 ~ 12406762 (-)
G69645 NA non-coding upstream 6786 12411507 ~ 12411835 (-)
G69631 NA non-coding upstream 20794 12425515 ~ 12429347 (-)
G69704 NA non-coding upstream 241115 12645836 ~ 12647002 (-)
G69733 NA non-coding upstream 326320 12731041 ~ 12731743 (-)
gtdc1 gtdc1,LOC107709416,LOC107555857,LOC107563182,LOC107675364,LOC107673117 other downstream 209434 12091131 ~ 12194961 (-)
LOC122351308 si:rp71-84d19.3,gtpbp8,LOC107663822,LOC107567641,LOC107738531,LOC107733632,LOC107598183 other downstream 903900 11496947 ~ 11500495 (-)
LOC122351858 slc10a2,LOC107663831,LOC107567642,LOC107675341,LOC107738529 other downstream 911275 11396666 ~ 11493120 (-)
mrasa LOC107551943,LOC107663912,LOC107733654,LOC107600440,LOC107738526 other downstream 1717768 10680158 ~ 10686627 (-)
fdx1 fdx1,LOC107663820,LOC107706088,LOC107720152,LOC107655504,LOC107600437,LOC107555213,LOC107655505 other downstream 1884938 10515272 ~ 10519457 (-)
G69650 NA other upstream 17708 12422429 ~ 12423446 (-)
lrch1 lrch1,LOC107709425,LOC107601076,LOC107673127,LOC107724026 other upstream 113563 12518284 ~ 12582425 (-)
LOC122351186 adcy5,LOC107555914,LOC107660638,LOC107596066,LOC107661140,LOC106586396,LOC107745452,LOC107668560,LOC107695824,LOC107716189,LOC107568450,LOC108433131 other upstream 303255 12707976 ~ 12720690 (-)
LOC122352189 NA other upstream 333323 12738044 ~ 12738171 (-)
G69757 NA other upstream 580403 12985124 ~ 12985978 (-)

Expression


Co-expression Network