CI01000000_00678887_00679319


Basic Information

Item Value
gene id CI01000000_00678887_00679319
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 678712 ~ 680447 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000000_00678887_00679319.mRNA
TTATAAAAAAGGACATGATAAACAAACAAATAAACACTTGCCTTTCCTTGTGGCCACATAATTCCCAGATAACTTGGAGAGCTGAGCCCTCCTCCTCTCTGAATTTTTTTTTTTTGGGGGGGGGAATGAGGACGTTGGATTAACATCACATGGTTCTCTCTGGCAGCCAAGACACATGACCCGCTCCACAGGAGGGGATAAAACCCACTTGAAAGACGACGGCATAGAGGCCGAGGGAGAGGAGGAGAAAAAAAAGAAAGATGGAGCAAACGTCCGGTTTTCTCAGACGCTGAGGAATGCCGTCGGCCTGCTTCTCGAACACAGAAATGCAGTACACTCATTCTCCCTTGAGACTCTCTCACTATTTCTTCTGCTCTCTCTATTTTCTCACTCCTATATTTGTTTAGAGACAGAGATTTGAACAAATCCTATGAATTAAACTTAAAGGATTAGTTCATTTTCAAATGAAAATTACCCCAAGCTTTACTCACCCTCAAGCCATCCTAGGTGTATATCACTTTCTTCTTTCTGATGAACACAATCAGAGAAATATTAATAAATATCCTGACACGTGAAGCGATGCGTTTGTGTAAAAAAATATCCATATTTAACAAGTTATGAAGTAAAATATCGAGCTTCCGCCAGACCACCTTCCGTATCCTACTTACGAAGAAAGTGTAAAACTCTAGCAGTTCAAAAAGCTTACGCTATGTCCTACGCCTTCCCTATTCAACTTACGGAACTGACGCAACGCCAGTTCCATTTTTTTTTTTCGTAATTTGAATAAGGAAGGCGATCTGGAGGAAGCTAGATATTTTACTTCATAACTTGTTAAATATAGATAACACTTAAAGACTTACAGTGTAATCGGCACCTGGACCCAGTAAAATTATACTGGGTCCTTATCTAAATTATATTTAGTCTCACTGACTAACATCCTTATTGATGGTAACTAAATGTTACTAAACAGACAAGATGGGATTCTAGAGTTAAATTATTTCTGTAATGTAACCCCAGTGCCATGTCCAGTGACGAAAATTGAAGACTTAAAGGTTGTTTTGACTAAGTGACCAACTAGCAATGCCCAAGCAACCACCCACAACACGCTATCAACCACTGTATCAATCTAAAGTTTTGCAACAAAAAAATTGTTATTTTTAGAAGTTGTGATAGTTTTACTGTTCACACCAAATGCTGACTGCTGCAACAGCTTGAGGCTGAATGCAAAGTGAAAGTTCAGAATCCATTTGTACTGTTGTCTGAAGTAGCACAGGTGCGTGGAGTACGTACAAAAAAGAACAGGGCAACAGAACGCCACGCTGCATCCAGCATAGACAGTATCAATGATTATAATTGGCTATGTTTGCTTTTGTTGCGTTGTGCCGATGCGTTCAATGTAGATACAGTGTTAGCATGCATAAATAAATACATTAATACTAGTATGTCTTAGGGGCCATTAACACAAAATGCATTTTTCTTTTAACTTTTTCATGCACGAGACAACAAGAAATAATTTACAACTTTCAAGTCACATTTGTCAAGACAGCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000000_00678887_00679319.mRNA True 1549 mRNA 0.39 2 678712 680447

Neighbor

gene id symbol gene type direction distance location
CI01000000_00639336_00658655 NA coding upstream 19664 639152 ~ 659048 (+)
CI01000000_00588173_00605818 NA coding upstream 72516 587868 ~ 606196 (+)
CI01000000_00264365_00265448 NA coding upstream 413206 264365 ~ 265506 (+)
CI01000000_00260299_00262433 NA coding upstream 415188 260299 ~ 263524 (+)
CI01000000_00252240_00259416 SPON2B, SPON2 coding upstream 418864 252240 ~ 259848 (+)
CI01000000_00753279_00782484 PPP3CA, PPP3CB coding downstream 72832 753279 ~ 782484 (+)
CI01000000_00814932_00820795 NA coding downstream 134485 814932 ~ 820875 (+)
CI01000000_00825374_00827067 NA coding downstream 144798 825245 ~ 827766 (+)
CI01000000_00948279_00956688 NA coding downstream 267832 948279 ~ 957335 (+)
CI01000000_00977418_00984766 TRAPPC11, TRAPPC11.S coding downstream 296971 977418 ~ 984766 (+)
G344 NA non-coding upstream 32938 645544 ~ 645774 (+)
G339 NA non-coding upstream 38527 639895 ~ 640185 (+)
G336 NA non-coding upstream 50839 627609 ~ 627873 (+)
G334 NA non-coding upstream 60920 617513 ~ 617792 (+)
G396 NA non-coding downstream 171312 851759 ~ 852279 (+)
G399 NA non-coding downstream 176868 857315 ~ 857515 (+)
G408 NA non-coding downstream 198031 878478 ~ 878769 (+)
G412 NA non-coding downstream 211954 892401 ~ 892633 (+)
G454 NA non-coding downstream 244039 924486 ~ 924704 (+)
G350 NA other upstream 1775 671842 ~ 676937 (+)
G252 NA other upstream 171640 503209 ~ 507072 (+)
G435 NA other downstream 744674 1425121 ~ 1432854 (+)
G579 NA other downstream 1135006 1767917 ~ 1908808 (+)
G2774 NA other downstream 3773331 4453778 ~ 4454232 (+)
G2850 NA other downstream 4045539 4725986 ~ 4726482 (+)
G6811 NA other downstream 9524384 10204831 ~ 10321679 (+)

Expression


Co-expression Network