G70289


Basic Information

Item Value
gene id G70289
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 13861522 ~ 13861935 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU103986
CAAACTGTAATTAACTTTGTTCTGTTTAGCAAGCACAATTTCCATTGTATCTGGCATGACGTGGATCTTGGTCTTATCCTTTTCCCAAGCTTCGATATAGCTTTGTTCATGATGTTTGCATTGGCTTTGGCCAAGGCCAATGGCATGTCTTCAGCTGTACAAGTGAACTTAAAGTTGCTTGGGTGCTGACGATACTTCCTTTCACTTAAAATTTCTCCAGCCTTTTTCACTTTCTCAACATCAACCGAACCGATGGGAACCCACCCAAGACCTTGAAGCCATTTTAAATCAGCTTTGTACACCGCC

Function

GO:

id name namespace
GO:0044085 cellular component biogenesis biological_process
GO:0042692 muscle cell differentiation biological_process
GO:0031497 chromatin assembly biological_process
GO:0048468 cell development biological_process
GO:0006323 DNA packaging biological_process
GO:0006325 chromatin organization biological_process
GO:0022607 cellular component assembly biological_process
GO:0006333 chromatin assembly or disassembly biological_process
GO:0051146 striated muscle cell differentiation biological_process
GO:0006334 nucleosome assembly biological_process
GO:0071824 protein-DNA complex subunit organization biological_process
GO:0065004 protein-DNA complex assembly biological_process
GO:0034728 nucleosome organization biological_process
GO:0071840 cellular component organization or biogenesis biological_process
GO:0030154 cell differentiation biological_process
GO:0010927 cellular component assembly involved in morphogenesis biological_process
GO:0055001 muscle cell development biological_process
GO:0055002 striated muscle cell development biological_process
GO:0014866 skeletal myofibril assembly biological_process
GO:0031032 actomyosin structure organization biological_process
GO:0071103 DNA conformation change biological_process
GO:0006996 organelle organization biological_process
GO:0007010 cytoskeleton organization biological_process
GO:0009653 anatomical structure morphogenesis biological_process
GO:0097435 supramolecular fiber organization biological_process
GO:0030239 myofibril assembly biological_process
GO:0048869 cellular developmental process biological_process
GO:0032989 cellular component morphogenesis biological_process
GO:0070925 organelle assembly biological_process
GO:0048646 anatomical structure formation involved in morphogenesis biological_process
GO:0030029 actin filament-based process biological_process
GO:0030036 actin cytoskeleton organization biological_process
GO:0061061 muscle structure development biological_process
GO:0016043 cellular component organization biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU103986 True 306 lncRNA 0.42 2 13861522 13861935

Neighbor

gene id symbol gene type direction distance location
tsn tsn,LOC107555354,LOC107686515,LOC107555051,LOC107658218,LOC107725218 coding downstream 37737 13821399 ~ 13823785 (-)
eaf2 eaf2,LOC107683512,LOC107725251,LOC107723678,LOC107658291,LOC108261038 coding downstream 74394 13783785 ~ 13787128 (-)
si:dkey-91i10.3 si:dkey-91i10.3,LOC107658292,LOC107723676,LOC107725254,LOC107555356,LOC107683415,LOC107555015 coding downstream 78070 13777626 ~ 13783452 (-)
mmadhcb LOC107555358,LOC107723693,LOC107725215,LOC107555052,LOC107658219 coding downstream 96196 13760324 ~ 13765326 (-)
LOC122351432 LOC107723646,LOC107684057,LOC107555330,LOC107577428 coding downstream 167335 13684985 ~ 13694187 (-)
tnfaip6 tnfaip6,LOC107723653,LOC107658287,LOC107677671,LOC107555349,LOC107725226 coding upstream 51939 13913874 ~ 13921597 (-)
itgb5 itgb5,LOC107723672,LOC107725247,LOC107658201 coding upstream 63978 13925913 ~ 13961097 (-)
rbm44 LOC107674378,LOC107723642,LOC107555328,LOC107736749,LOC107735772 coding upstream 99822 13961757 ~ 13972062 (-)
etv5a etv5,etv5a,LOC107723673,LOC107729410,LOC107658285,LOC107673585 coding upstream 112112 13974047 ~ 13985162 (-)
LOC122351370 LOC107723674,LOC107672245,LOC107555347,LOC567728,LOC107555039,LOC107658284,LOC107729411 coding upstream 123080 13985015 ~ 14086771 (-)
G70290 LOC107658288 non-coding downstream 2121 13858996 ~ 13859401 (-)
G70272 NA non-coding downstream 23922 13837310 ~ 13837600 (-)
G70271 NA non-coding downstream 25823 13835246 ~ 13835699 (-)
G70263 LOC107723691,LOC107555352,LOC107725250,LOC107555050 non-coding downstream 44779 13815711 ~ 13816743 (-)
G70033 NA non-coding downstream 179383 13679380 ~ 13682139 (-)
G70303 NA non-coding upstream 10771 13872706 ~ 13873011 (-)
G70305 LOC107725229,LOC107658288 non-coding upstream 11583 13873518 ~ 13876466 (-)
G70306 NA non-coding upstream 16189 13878124 ~ 13878412 (-)
G70308 NA non-coding upstream 61814 13923749 ~ 13924104 (-)
G70309 NA non-coding upstream 62681 13924616 ~ 13924836 (-)
G70261 LOC107682829,LOC107723691,LOC107555352,LOC107658202,LOC107555050 other downstream 48195 13807822 ~ 13813327 (-)
tmem163a tmem163a,LOC107658221,LOC107725256,LOC107684456,LOC107555363,LOC106586306,LOC106582396 other downstream 187715 13642303 ~ 13673807 (-)
gypc gypc,LOC107723681,LOC107725252,LOC107555063,LOC107567781,LOC107684853,LOC107695565 other downstream 365855 13473135 ~ 13495667 (-)
G69757 NA other downstream 875544 12985124 ~ 12985978 (-)
LOC122352189 NA other downstream 1123351 12738044 ~ 12738171 (-)
rif1 LOC107658288,LOC107555351,LOC107658286,LOC107725242,LOC107680950 other upstream 17635 13879570 ~ 13912943 (-)
G70294 NA other upstream 76324 13938259 ~ 13939868 (-)
G70317 NA other upstream 334544 14196479 ~ 14253776 (-)
LOC122351495 NA other upstream 497711 14359646 ~ 14372674 (-)
G70549 NA other upstream 1441168 15303103 ~ 15305975 (-)

Expression


Co-expression Network