LOC122351495


Basic Information

Item Value
gene id LOC122351495
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 14359646 ~ 14372674 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU104075
GTGATCGCGCGCTCGCGGTAATGACAGGCGCGCGGATGAGCTCGCGCTTGCGGCGGGACGCCGGTGATGGAGCGGCTGCTGCTGACACTGGAAGATTAGCGCGCGTCCGTTTATTTGTGCGTGTCAGAGGTTATTCCCATTTCCTGTACTTCAAACTCTGCCTCAGTTGGGGTCAAAGGTTAAAGGAACAGCGCTGTGTTTCACGCCCCTCTCATCCTCCATTTGACAGTGTCAGCACAAGGGGCCGGGAGCTAATGGCCAAAGTTCAGCTCCGTCTGAAAAAGCGGCGAGTGAA
>XM_043248573.1
GTGATCGCGCGCTCGCGGTAATGACAGGCGCGCGGATGAGCTCGCGCTTGCGGCGGGACGCCGGTGATGGAGCGGCTGCTGCTGACACTGGAAGATTAGCGCGCGTCCGTTTATTTGTGCGTGTCAGAGGTTATTCCCATTTCCTGTACTTCAAACTCTGCCTCAGTTGGGGTCAAAGGTTAAAGGAACAGCGCTGTGTTTCACGCCCCTCTCATCCTCCATTTGACAGTGTCAGCACAAGGGGCCGGGAGCTAATGGCCAAAGTTCAGCTCCGTCTGAAAAAGCGGCGAGTGAATTACAAATGTCAGCGAGGAAACAGCGGTCCTGATTCCTGCATGGCTAGTTGTTGGGCCTTAATTAGCCTTGCAGAACAAGGTGTGCAGCTTGCTGAAGAGCTTCCATTCAGAGAGCTTTCAGAGCCTGTGATGCAGCAAGTGCCTAACAGCAGATGCAAATCTAAAGAACATGCTATTCCTATTCAGGTGCATCTCTCAGAGGAACGAAGGGGGGTTGTGGGTAATGGGATAGTCATCGAGGACCTATTCAGAGCCCTTATGCTCATAGTTCCATTAATGAGCACAGAGACCATTCATAAGATGAAATGGTGGGGGAAGGTGGGAGGCGGCAGTTGCGTCTGCGCGTTCAGTGTCACACCCAGCTCagcaagaaaaaagaaaaagcgtaTTGTTCCATCCGGGGATTGTGACCAGGCCGGCTTGGGAGTGAAACCAATCCTGCTCAGGGTTAACGAGCCAACAGCCCGCTGCTCATCAGGCCAGCTAATGAGTTCTCTCACGCAGACCTATCACATGACCTCTAGGGTCACATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU104075 False 295 lncRNA 0.57 3 14363039 14372674
XM_043248573.1 True 830 mRNA 0.53 7 14359646 14372674

Neighbor

gene id symbol gene type direction distance location
sox1a sox1a,LOC107569013,LOC107668909,LOC107658211,LOC107597426,LOC107724510 coding downstream 19023 14338698 ~ 14340623 (-)
rev1 rev1,LOC107658260,LOC107568994,LOC107668902 coding downstream 53362 14290849 ~ 14306284 (-)
txndc9 txndc9,LOC107568936,LOC107724502,LOC107668903,LOC107658261,LOC107705160,LOC107597391 coding downstream 69418 14287287 ~ 14290228 (-)
zgc:162944 zgc:162944,LOC107724454,LOC107597427,LOC107658212,LOC107705163,LOC108424409,LOC103034916,LOC108266838 coding downstream 74116 14283602 ~ 14285530 (-)
kctd12.1 kctd12.1,LOC107724452,LOC107668866,LOC107658214,LOC107705151,LOC107580341 coding downstream 81980 14275569 ~ 14277666 (-)
arhgef7a arhgef7a,LOC107712280,LOC107668898,LOC107569023,LOC107597388 coding upstream 35903 14408577 ~ 14426806 (-)
gja3 gja3,LOC107668878,LOC107712277,LOC107569119,LOC107658255,LOC107597383 coding upstream 114135 14486809 ~ 14492701 (-)
gjb8 cx30.3,LOC107668881,LOC107569159,LOC107712256,LOC107597425,LOC107658209,LOC107716308 coding upstream 120755 14493429 ~ 14496095 (-)
cryl1 cryl1,LOC107668879,LOC107724506,LOC107712274,LOC107658254 coding upstream 124112 14496786 ~ 14506954 (-)
eef1akmt1 n6amt2,LOC107658251,LOC107668884,LOC107597381,LOC107712275,LOC107569169,LOC107724476 coding upstream 146254 14518928 ~ 14521341 (-)
G70332 LOC107724468 non-coding downstream 112318 14244287 ~ 14247328 (-)
LOC122352120 NA non-coding downstream 170645 14173817 ~ 14189001 (-)
G70309 NA non-coding downstream 434810 13924616 ~ 13924836 (-)
G70308 NA non-coding downstream 435542 13923749 ~ 13924104 (-)
G70306 NA non-coding downstream 481234 13878124 ~ 13878412 (-)
G70382 NA non-coding upstream 104658 14477332 ~ 14562992 (-)
G70393 NA non-coding upstream 217184 14589858 ~ 14590275 (-)
G70396 NA non-coding upstream 221589 14594263 ~ 14595342 (-)
G70438 LOC107600383,LOC107655530,LOC107720111 non-coding upstream 544126 14916800 ~ 14918840 (-)
LOC122352110 NA non-coding upstream 564450 14937124 ~ 14942863 (-)
G70317 NA other downstream 105870 14196479 ~ 14253776 (-)
G70294 NA other downstream 419778 13938259 ~ 13939868 (-)
rif1 LOC107658288,LOC107555351,LOC107658286,LOC107725242,LOC107680950 other downstream 446703 13879570 ~ 13912943 (-)
G70261 LOC107682829,LOC107723691,LOC107555352,LOC107658202,LOC107555050 other downstream 546319 13807822 ~ 13813327 (-)
tmem163a tmem163a,LOC107658221,LOC107725256,LOC107684456,LOC107555363,LOC106586306,LOC106582396 other downstream 685839 13642303 ~ 13673807 (-)
G70549 NA other upstream 930429 15303103 ~ 15305975 (-)
tmtc4 tmtc4,LOC107748611,LOC107569561,LOC107681320,LOC107600375,LOC107694590 other upstream 1016544 15389218 ~ 15399437 (-)
G70663 plcl1,LOC107731752,LOC107569711,LOC107690606,LOC107659890,LOC107595846,LOC107719808 other upstream 1398747 15771421 ~ 15771864 (-)
dcaf6 LOC107673675,LOC107695452,LOC107748145,LOC107595867 other upstream 2348130 16720804 ~ 16746222 (-)
G70986 pou2f1b,LOC107748141 other upstream 2444466 16817140 ~ 16823775 (-)

Expression


Co-expression Network