LOC122351681 (dach1,LOC107668899)


Basic Information

Item Value
gene id LOC122351681
gene name dach1,LOC107668899
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 15034819 ~ 15041730 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU104311
GCGCCGAAAAAGTGTTCTAACCTGGCATTAGTGCAGTCGTTGTAGAGGGTCTCGAAGTCTTTTCTGGAGATGAGCTTGCAGCGGTTGACCCCGGGCTGGATGGCCCCCAGTCCGCGCAGGATGCGGACCTGCTCCACGTTACACACCACCGGCGTGATCTCCAGCCGCTTGAGTTTGGTGTAGACGGTGTGCAGACCCCCGACCAAGTGTTTGAGAAACAGGTCAAACGCCTGGGGCAGGCAGATGAGCTCCTGTCCTTCCACCGTGAAAGAGGCCACCTTGGCGCCCCTGAGCTCCACCATCCGACACTCATTATTCTGCGGGGTGTTTTCAACAGGGGACGGGGTAGAATACACGGGCTTGCCGCCCAGTGGGATGCTGCTGGTGTTGGTGCTGATCAGATCCGTGCGGAACAGATTCTGAGTCGCTGACTGAGAAGGAGACGCAGAAGTGGCCGAGGGCGAGGATGATGATGCTGCGGTCGCGgaacatgatgatgatgatgctgatgaTGCTGACGAAGAAGTTGAGATCGGACACGGCTGGACCAGAGACGACGGGGGAATCAGAGCAGCCGGTACGGCCATGGTGTTCTGCACCTATCAAATAAGTTCAGACGGGAAGCAGAGCCGGTATGCAAAAGTAGcgcaaagaagaagaaatccACCCCGAGTGCGCTCCGCCGACGCGCGAATGGATGTGGAGAGGTGCCGTGCTGAAATTAGGGCTCTGAGAAAGATTGAGAGAGAATGACAGGAAGAAAATGAGCAGAAAAGTGTGCCTCTGCTCTGTGGATGAGTTGTTGTTGTCACAAGGTACAGAGAGGGAGGAGCCACTATCAGCCCTTTGAAACGGAGACACGCACAATCTAATGCGAGCCTGGTGGAACAGCGTGCGGAACGATTCCGGCGTTCACTCACAACCTTTTCGTGAGCTCGGATGAAACCCGCGCTTCTCCTAGGAACGTTCTCCGAAACTCTGCTTTAATACCTGTCAGGACTTCTCTCGCCTATTACCGTTCATTGTTTTAAAGTACGCTCGAAGTTCACACGTTTCgacaatatgcaaatataaaagAGGCCCACGATGGTTGCCGGGGGATGACATGACATGGCTAATGAGGAAAGGCCCATCAcgagaccacacacacacacacgaagATGAGATCAGAGAGTAAACAGAGACCAAATGTGCTCTAATAAAACTACAGATCTTCTAGCCGGCTCATTTCCATAAAGCAGTTCCTGCACAAATCAGGACTATGGAATCTGCAGTGATAGAAGTCTGTGTACATGCATCTTCCTCCATATGAATACTGGCATAAAAAAGGCGatgaattcatttgtttaaGGGCGTAAAAGTTCTTTACCACAGTTAATCCATTTAATTAACTCAAGTAAAAGATGGATAAAACCCTTTTATCAAAGCTCAACATGTAAGAAATATAATCTGCAGA
>XR_006251790.1
GGCGTTCACTCACAACCTTTTCGTGAGCTCGGATGAAACCCGCGCTTCTCCTAGGAACGTTCTCCGAAACTCTGCTTTAATACCTGTCAGGACTTCTCTCGCCTATTACCGTTCATTGTTTTAAAGTACGCTCGAAGTTCACACGTTTCgacaatatgcaaatataaaagAGGCCCACGATGGTTGCCGGGGGATGACATGACATGGCTAATGAGGAAAGGCCCATCAcgagaccacacacacacacacgaagATGAGATCAGAGAGTAAACAGAGACCAAATGTGCTCTAATAAAACTACAGATCTTCTAGCCGGCTCATTTCCATAAAGCAGTTCCTGCACAAATCAGGACTATGGAATCTGCAGTGATAGAAGTCTGTGTACATGCATCTTCCTCCATATGAATACTGGCATAAAAAAGGCGatgaattcatttgtttaaGGGCGTAAAAGTTCTTTACCACAGTTAATCCATTTAATTAACTCAAGTAAAAGATGGATAAAACCCTTTTATCAAAGCTCAACATGTAAGAAATATAATCTGCAGAAATATAATCTCACAGGTTGGCTACAAATTATAACATgcaataagagagagagagacatttatGAATATCATCCAAgctcaatatatataaaacgtatgtatatatgtctaacaaaataacataaattaaattgaatgtttAGCTTCCTAGCATAAACTTGGAACGCCGTGCTTCGTTATGTGCATTAGAGAGATACGCTGCCATGAAATAATTATCAGATGTCAAGCTGTTCTGATGCTCAGTTCCATTTGTGCGGTTGTTATGATGATGCCATCCTGCCTTAcaactcactctctctctctctctctatctctctctctctgtgtgtgcatCCTGTCTGCAAATATATCTGCAAATCTCAGGATTCGCTTGGAAAGATGCCAGCCGAGTGTCTTGTGAGCTGAGCTGGCAAAACGTCCAACCGTATGTAAAATACTGCCCCTCTGGTGATATCAGTCTTTAAAAGAGAgctaatttcatttttcaaaagcagCCGCTTGATAGCTGCACAATTACTCTGCGCTGCCCCGTCCCCTGTTTAAAGCCGCACAGACTTTTATATCAGGCGAGAGATTTGTGGATATCTAAATTGGAAGGTAAACCTGTATAAACAGTAGTAATTACCGTGCCATTCACAGGGCCTGTTGTGCTCGTTCGGCAACAGCCACAGTGATTAAAATGAATCTCCATCGACTTCTCCATTAAATTGCTGGCAGTGGCGATCCTTTGACCTTTCCCATTGATTGAACATAACAATCACAATTCAATTGTAATGCAAAGAGAACATTTGTTATAATGTACATGAGATGCATGAGCCATTTCCTAGAGGGTTGAGGTAATCAATGAAGTGACTTCAAAAGGAACCTGCACAAAGACTCATTCTAGTCAGAATCTGCACTACACATCGAACCTAACGTCTGTTGCATCACTCAATACATTTGCATCCTATAGAAAAAAGATACTGTGATTCCAAAACCCTTGGTGTCATTTCACGCTAGCTACAATAGCCCAAATACTGACGGGTACGATCCGACGTTCATTTGTTTCGATTTTTGCGACGCTAAGCCTTCCCAGAATTCACTGCATGTGCCACAGAGGTCTAAGAAAATGATTACGGCTGACATTTCGCTGAATtatttccctctcttttttttttgcattgttctCTGTGCATCCACTGATTAGTAACATCTGTATGTGACACTGGTGCGGTTCCAGAAACCCTTCTGCTCGTAAAACGCCATTAAACTTGCTGCGAAACTA

Function

symbol description
dach1 Enables DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in negative regulation of cell migration and negative regulation of cellular macromolecule biosynthetic process. Predicted to be located in cytoplasm. Predicted to be part of transcription regulator complex. Predicted to be active in nucleus.

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU104311 False 1456 lncRNA 0.51 4 15036082 15041730
XR_006251790.1 True 1812 lncRNA 0.41 4 15034819 15040823

Neighbor

gene id symbol gene type direction distance location
klf5b klf5,LOC107740910,LOC107668908,LOC107720143 coding downstream 28149 15001464 ~ 15006670 (-)
morc3a morc3a,LOC107569945,LOC107724492 coding downstream 136694 14884111 ~ 14898125 (-)
vtcn1 vtcn1,LOC107712252 coding downstream 157163 14875492 ~ 14877656 (-)
trim45 trim45,LOC107668847,LOC107569387,LOC107658235,LOC107597366 coding downstream 160127 14868759 ~ 14874692 (-)
man1a2 man1a2,LOC107668846,LOC107724469,LOC107658234 coding downstream 172727 14795431 ~ 14862092 (-)
gpr18 LOC107740919,LOC107681324,LOC107668869,LOC107748622,LOC107600424,LOC107570094 coding upstream 115374 15157104 ~ 15161278 (-)
gpr183a gpr183a,LOC107569509,LOC107740920,LOC107668870,LOC107748620,LOC107681323,LOC107600423,LOC103047691 coding upstream 122569 15164299 ~ 15170670 (-)
si:ch211-184m13.4 LOC107668872,LOC107748619,LOC107569521,LOC107740921,LOC107600422,LOC107681312 coding upstream 137744 15179474 ~ 15181677 (-)
zic5 zic5,LOC107569541,LOC107694589,LOC107740913,LOC107748614,LOC107681322,LOC107600378 coding upstream 222149 15263879 ~ 15267519 (-)
nalcn nalcn coding upstream 383717 15425447 ~ 15490245 (-)
G70494 LOC107740907,LOC107668887,LOC107600382,LOC107720110 non-coding downstream 52966 14975412 ~ 14981853 (-)
LOC122352110 NA non-coding downstream 91956 14937124 ~ 14942863 (-)
G70438 LOC107600383,LOC107655530,LOC107720111 non-coding downstream 115979 14916800 ~ 14918840 (-)
G70396 NA non-coding downstream 439477 14594263 ~ 14595342 (-)
G70393 NA non-coding downstream 444544 14589858 ~ 14590275 (-)
LOC122351294 NA non-coding upstream 215258 15256988 ~ 15262676 (-)
G70581 NA non-coding upstream 377269 15418999 ~ 15421577 (-)
LOC122351574 NA non-coding upstream 587153 15628883 ~ 15638436 (-)
G70633 pikfyve,LOC107719798,LOC107681306,LOC107731754 non-coding upstream 600529 15642259 ~ 15644276 (-)
G70660 NA non-coding upstream 720653 15762383 ~ 15762669 (-)
LOC122351495 NA other downstream 662145 14359646 ~ 14372674 (-)
G70317 NA other downstream 781043 14196479 ~ 14253776 (-)
G70294 NA other downstream 1094951 13938259 ~ 13939868 (-)
rif1 LOC107658288,LOC107555351,LOC107658286,LOC107725242,LOC107680950 other downstream 1121876 13879570 ~ 13912943 (-)
G70261 LOC107682829,LOC107723691,LOC107555352,LOC107658202,LOC107555050 other downstream 1221492 13807822 ~ 13813327 (-)
G70549 NA other upstream 261373 15303103 ~ 15305975 (-)
tmtc4 tmtc4,LOC107748611,LOC107569561,LOC107681320,LOC107600375,LOC107694590 other upstream 347488 15389218 ~ 15399437 (-)
G70663 plcl1,LOC107731752,LOC107569711,LOC107690606,LOC107659890,LOC107595846,LOC107719808 other upstream 729691 15771421 ~ 15771864 (-)
dcaf6 LOC107673675,LOC107695452,LOC107748145,LOC107595867 other upstream 1679074 16720804 ~ 16746222 (-)
G70986 pou2f1b,LOC107748141 other upstream 1775410 16817140 ~ 16823775 (-)

Expression


Co-expression Network