LOC122351678 (hspe1,mob4,LOC107690609,LOC107595852,LOC107569672,LOC107731766,LOC106586370,LOC105016277,LOC100701317,LOC103156730,LOC101472107,LOC102310674,LOC102783361,LOC108238849,LOC107690608,LOC106582314,LOC105899369)


Basic Information

Item Value
gene id LOC122351678
gene name hspe1,mob4,LOC107690609,LOC107595852,LOC107569672,LOC107731766,LOC106586370,LOC105016277,LOC100701317,LOC103156730,LOC101472107,LOC102310674,LOC102783361,LOC108238849,LOC107690608,LOC106582314,LOC105899369
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 15708201 ~ 15715901 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU104429
TCCCTTCCAGACATTTCTTCTTCACGTGGATCGCAGTAGTGAAGTGGTCCAGTGTGACTGTCTTATGCTGCTCAGCCGAACGCGCTTTTCATAAAGATCAGCTAAAATGGCTTTCCGGAAATTTCTTCCCATGTTCGACCGCGTGTTGGTGGAGCGGTTAGCTGCAGAGACGGTGACAAAAGGAGGCATCATGATTCCAGAGAAGTCTCAAGCCAAAGTGCTGCAGGCTACAGTGGTGGCAGTGGGTCCAGGAGCCACCAGCAAGGATGGGAAATTAACTCCTCTCTGCGTCAAAGTTGGGGATAAAGTTCTGCTGCCAGAGTATGGAGGAACAAAAGTTATTCTTGGTGATAAGgaCTATTTCCTGTTCCGGGATGGAGATATTCTTGGCAAATATGTAGATTGAAGTCCCATCTATGTCATTCTGGAGTCCATAGAGAGAATGGGTGttccatgtttgttttcttttttctatgcCATTCAATTGTAAATAAGTATGAtcaagttttgtttaaaataaagtgatctTGATGTTTCATCTTGTTTCTTCATGGAACAGGTTGGAATTGAACATGTGAATGTTGAAACATGACCGTCTAAATTGTAGTATACACACTAAATTAATTAGTtactttatattacatattcatgAACGATTCGTTTTAGTATATGGTTACATATGAATTCTTTAACATCGTAGAAGTTTATAATTGAGtcagatggattttttttaaatgtaataataaaataattggtaAACTAGGGgttaaaaattaatgttttactaGACAACTTTTTATTCCATGAATAATTCCATTTGAACTATGAATATGTGCTACGGGATGTGATCAGAAGGAATAACTGAAGTAATAACATTACAGTGCCTTCTGAAGGTTATCCAGACTACCTTTTTAGCACAGTGATATAAAGTGAAGTGTTTCTCAGCTGgcatgacattttt
>XM_043248899.1
GGGGGCACTGTATCTCAGCTCCTCCTGCAGTAGCTCTACTCGTCCTCTGGGGGCgcgctgtcaatcaaactctaAATCTGTCGAGATGGTCATGGCGGAGGGCACAGCTGTTCTGAGGAGGAATAGACCAGGCACCAAGGCGAAGgACTTCTATAACTGGTCTGATGAGTCTTTTGAAGAGATGGACAGCACACTGGCAGTGCAACAGTATATTCAGCAGAACATCCGTTCAGATTGTTCCAACATAGAGAAGATTATGGAGCCTCCAGAGGGACAGGATGAGGGGGTGTGGAAATATGAACATCTCAGacaGTTCTGTTTGGAGCTCAATGGCTTAGCAGTTAAACTGCAGAACGAGTGTCATCCTGACACGTGTACTCAGATGACTGCCACTGAGCAGTGGATCTTTCTGTGTGCTGCCCATAAGACTCCCAAAGAGTGCCCTGCCATTGACTACACAAGGCACACTCTCGATGGAGCTGCGTGTCTTCTCAACAGCAACAAGTATTTTCCCAGCCGCGTCAGCATTAAGGAATCATCTGTGGCCAAACTGGGCTCGGTTTGCCGTCGCATCTATAGGATTTTCTCCCATGCTTACTTTCACCACCGCCAGATTTTTGACAAGTATGAGAATGAGACTTTCTTGTGTCACCGCTTCACTCGTTTCGTGATGAAGTACAACCTCATGTCTAAGGACAACCTCATCGTGCCCATTCTGGAAGAGGAAGTCCAGAGTGCCACTGCTGGGGAGAGCGATGCCTGAGctgtatttgtgcattttgagcctCTAGAATCCAGACAGCAGAGGCCTACAACTTTAGTCATTTGACATGTTACTTTTCCAGTCACTAATGCTTCATTTGATCCAAATTTCATCATTCAGCTGTAACAATCAAAACGTTACATCAGCAGCTCCTTGTACATATCTCACCCCATCTCCATTGTAAATCCTGCTTAACCAATAAgaatttcctttcttttttttccccctctctcgaCTATAAACAAGTCTGGTGATATTCACCCTGTCTTTTCCCTCGTTGTTAAGTTATTACATGGGTGGAGGGCTCTTATCCAGCccactttgtcttttttttttttttttttttttaaataaactaaaatgtatggTATTTTCATTATGTCAATTGTTAATAAAAGACTGTACCTAGTCTGCGATTATACTTT
>XM_043248900.1
GGTCGGTAAGGATTAGTTTTTGGCGCATGCGCAGTTCCCTTCCAGACATTTCTTCTTCACGTGGATCGCAGTAGTGAAGTGGTCCAGTGTGACTGTCTTATGCTGCTCAGCCGAACGCGCTTTTCATAAAGATCAGCTAAAATGCAGGCTTTCCGGAAATTTCTTCCCATGTTCGACCGCGTGTTGGTGGAGCGGTTAGCTGCAGAGACGGTGACAAAAGGAGGCATCATGATTCCAGAGAAGTCTCAAGCCAAAGTGCTGCAGGCTACAGTGGTGGCAGTGGGTCCAGGAGCCACCAGCAAGGATGGGAAATTAACTCCTCTCTGCGTCAAAGTTGGGGATAAAGTTCTGCTGCCAGAGTATGGAGGAACAAAAGTTATTCTTGGTGATAAGgaCTATTTCCTGTTCCGGGATGGAGATATTCTTGGCAAATATGTAGATTGAAGTCCCATCTATGTCATTCTGGAGTCCATAGAGAGAATGGGTGttccatgtttgttttcttttttctatgcCATTCAATTGTAAATAAGTATGAtcaagttttgtttaaaataaagtgatctTGATGTTTCA
>XM_043248901.1
TAGTTTTTGGCGCATGCGCAGTTCCCTTCCAGACATTTCTTCTTCACGTGGATCGCAGTAGTGAAGTGGTCCAGTGTGACTGTCTTATGCTGCTCAGCCGAACGCGCTTTTCATAAAGATCAGCTAAAATGGCTTTCCGGAAATTTCTTCCCATGTTCGACCGCGTGTTGGTGGAGCGGTTAGCTGCAGAGACGGTGACAAAAGGAGGCATCATGATTCCAGAGAAGTCTCAAGCCAAAGTGCTGCAGGCTACAGTGGTGGCAGTGGGTCCAGGAGCCACCAGCAAGGATGGGAAATTAACTCCTCTCTGCGTCAAAGTTGGGGATAAAGTTCTGCTGCCAGAGTATGGAGGAACAAAAGTTATTCTTGGTGATAAGgaCTATTTCCTGTTCCGGGATGGAGATATTCTTGGCAAATATGTAGATTGAAGTCCCATCTATGTCATTCTGGAGTCCATAGAGAGAATGGGTGttccatgtttgttttcttttttctatgcCATTCAATTGTAAATAAGTATGAtcaagttttgtttaaaataaagtgatctTGATGTTTCA
>XM_043248902.1
GGTCGGTAAGGATTAGTTTTTGGCGCATGCGCAGTTCCCTTCCAGACATTTCTTCTTCACGTGGATCGCAGTAGTGAAGTGGTCCAGTGTGACTGTCTTATGCTGCTCAGCCGAACGCGCTTTTCATAAAGATCAGCTAAAATGCAGGCTTTCCGGAAATTTCTTCCCATGTTCGACCGCGTGTTGGTGGAGCGGTTAGCTGCAGAGACGGTGACAAAAGGAGGCATCATGATTCCAGAGAAGTCTCAAGCCAAAGTGCTGCAGGCTACAGTGGTGGCAGTGGGTCCAGGAGCCACCAGCAAGgACTTCTATAACTGGTCTGATGAGTCTTTTGAAGAGATGGACAGCACACTGGCAGTGCAACAGTATATTCAGCAGAACATCCGTTCAGATTGTTCCAACATAGAGAAGATTATGGAGCCTCCAGAGGGACAGGATGAGGGGGTGTGGAAATATGAACATCTCAGacaGTTCTGTTTGGAGCTCAATGGCTTAGCAGTTAAACTGCAGAACGAGTGTCATCCTGACACGTGTACTCAGATGACTGCCACTGAGCAGTGGATCTTTCTGTGTGCTGCCCATAAGACTCCCAAAGAGTGCCCTGCCATTGACTACACAAGGCACACTCTCGATGGAGCTGCGTGTCTTCTCAACAGCAACAAGTATTTTCCCAGCCGCGTCAGCATTAAGGAATCATCTGTGGCCAAACTGGGCTCGGTTTGCCGTCGCATCTATAGGATTTTCTCCCATGCTTACTTTCACCACCGCCAGATTTTTGACAAGTATGAGAATGAGACTTTCTTGTGTCACCGCTTCACTCGTTTCGTGATGAAGTACAACCTCATGTCTAAGGACAACCTCATCGTGCCCATTCTGGAAGAGGAAGTCCAGAGTGCCACTGCTGGGGAGAGCGATGCCTGAGctgtatttgtgcattttgagcctCTAGAATCCAGACAGCAGAGGCCTACAACTTTAGTCATTTGACATGTTACTTTTCCAGTCACTAATGCTTCATTTGATCCAAATTTCATCATTCAGCTGTAACAATCAAAACGTTACATCAGCAGCTCCTTGTACATATCTCACCCCATCTCCATTGTAAATCCTGCTTAACCAATAAgaatttcctttcttttttttccccctctctcgaCTATAAACAAGTCTGGTGATATTCACCCTGTCTTTTCCCTCGTTGTTAAGTTATTACATGGGTGGAGGGCTCTTATCCAGCccactttgtcttttttttttttttttttttttaaataaactaaaatgtatggTATTTTCATTATGTCAATTGTTAATAAAAGACTGTACCTAGTCTGCGATTATACTTT

Function

symbol description
hspe1 Predicted to enable chaperone binding activity; metal ion binding activity; and unfolded protein binding activity. Predicted to be involved in chaperone cofactor-dependent protein refolding. Predicted to act upstream of or within protein folding. Predicted to be active in mitochondrial matrix. Is expressed in several structures, including alar plate midbrain region; digestive system; midbrain; pectoral fin; and segmental plate. Orthologous to human HSPE1 (heat shock protein family E (Hsp10) member 1).
mob4 Predicted to enable kinase activity. Predicted to act upstream of or within phosphorylation. Is expressed in head. Orthologous to several human genes including MOB4 (MOB family member 4, phocein).

NR:

description
PREDICTED: MOB-like protein phocein isoform X3

GO:

id name namespace
GO:0006950 response to stress biological_process
GO:0006457 protein folding biological_process
GO:0016310 phosphorylation biological_process
GO:0005737 cytoplasm cellular_component
GO:0016301 kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU104429 False 961 TUCP 0.38 4 15708236 15711177
XM_043248899.1 False 1188 mRNA 0.45 8 15711727 15715901
XM_043248900.1 False 576 mRNA 0.45 4 15708201 15710754
XM_043248901.1 False 560 mRNA 0.44 4 15708214 15710754
XM_043248902.1 True 1346 mRNA 0.45 9 15708201 15715901

Neighbor

gene id symbol gene type direction distance location
coq10b LOC107690612,LOC107569649,LOC107731759,LOC107659895,LOC107719803,LOC107595850 coding upstream 8744 15693357 ~ 15699457 (+)
pikfyve pikfyve,LOC107731754,LOC107719798,LOC107595854 coding upstream 52244 15637558 ~ 15655957 (+)
cfap97d2 LOC107719799,LOC107681311,LOC107595894 coding upstream 70726 15635585 ~ 15637475 (+)
itgbl1 itgbl1,LOC107748609,LOC107690616,LOC107731761,LOC107600373,LOC107569583 coding upstream 183462 15492358 ~ 15524739 (+)
zic2a zic2a,LOC107600377,LOC107681317,LOC107569553,LOC107694587 coding upstream 432360 15270034 ~ 15275841 (+)
ankrd50l si:dkey-145p14.5,LOC107569776,LOC107731753,LOC107719812,LOC107595839,LOC107690486,LOC107690620 coding downstream 266548 15982449 ~ 15995751 (+)
cnga4 cnga4 coding downstream 309086 16024987 ~ 16030512 (+)
nhlh2 nhlh2,LOC107570119,LOC107690628,LOC107719823,LOC107576851,LOC107690490,LOC108266261 coding downstream 326220 16042121 ~ 16045280 (+)
vangl1 vangl1,LOC107690494,LOC107719814,LOC107731768,LOC107690599,LOC103036576 coding downstream 335516 16051417 ~ 16078591 (+)
LOC122351352 NA coding downstream 369908 16085809 ~ 16087211 (+)
G70603 LOC107690614,LOC107731751,LOC107719800,LOC107659892,LOC107595847 non-coding upstream 16014 15689198 ~ 15692187 (+)
LOC122351790 NA non-coding upstream 25179 15681003 ~ 15683022 (+)
G70478 NA non-coding upstream 391527 15307487 ~ 15316674 (+)
LOC122351314 NA non-coding upstream 401811 15299852 ~ 15306390 (+)
G70477 zic5,LOC107569541,LOC107694589,LOC107748614,LOC107740913,LOC107681322,LOC107600378 non-coding upstream 440686 15241778 ~ 15267515 (+)
G70715 zgc:112056,LOC107731744,LOC107570103,LOC107659887,LOC107595889,LOC107690602,LOC103039907,LOC108266095,LOC105908687 non-coding downstream 247919 15963820 ~ 15964664 (+)
G70700 LOC107595840 non-coding downstream 258580 15974481 ~ 16012154 (+)
LOC122352145 NA non-coding downstream 314973 16030874 ~ 16032168 (+)
G70743 rpl8,LOC106586796 non-coding downstream 438322 16154223 ~ 16183683 (+)
G70746 NA non-coding downstream 487891 16203792 ~ 16205690 (+)
si:ch211-168k14.2 si:ch211-168k14.2,LOC107681321,LOC107748618,LOC108441415,LOC105905900,LOC108266656,LOC107600399 other upstream 282840 15401127 ~ 15425361 (+)
LOC122351767 NA other upstream 1118762 14587082 ~ 14589439 (+)
ccnt2a ccnt2a,LOC107658298,LOC107725237,LOC107723659,LOC107684218,LOC107555058,LOC107555362 other upstream 2023366 13676163 ~ 13684835 (+)
G69834 col6a3,LOC107685998,LOC107567775,LOC107670696 other upstream 2403610 13289693 ~ 13304591 (+)
G69755 NA other upstream 2722223 12984868 ~ 12985978 (+)
plcl1 LOC107569711,LOC107731752,LOC107690606,LOC107719808,LOC107659890,LOC107595846 other downstream 18669 15734570 ~ 15789702 (+)
rabl3 rabl3,LOC107569739,LOC107690631,LOC107659889,LOC107595844,LOC107736356 other downstream 183526 15899427 ~ 15901720 (+)
G70814 NA other downstream 1012606 16728507 ~ 16731361 (+)
mpc2b mpc2,LOC107695492,LOC107673680 other downstream 1029992 16745893 ~ 16749701 (+)
si:ch211-218d20.15 LOC107748193,LOC107695487,LOC107756736,LOC107673701,LOC107597587 other downstream 1200860 16916761 ~ 16919290 (+)

Expression


Co-expression Network