G70962 (f5,LOC107756778,LOC107748149,LOC107565953,LOC107673674)


Basic Information

Item Value
gene id G70962
gene name f5,LOC107756778,LOC107748149,LOC107565953,LOC107673674
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 16712819 ~ 16713846 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU104949
attgaattaaagcatttatatgcagtttttaaaaattctgcatttatttaatatatttaattacagcacattaaaaatggattaaattcatATTGTCATATGAAAGCACAGTGTTTATTCAAAATCACAACCAAGCAGCTCAATCCTCATAGTGATGGACTTCTGCCATTGTTTTGGAATAATCCGGATGAATTTGGAAAATATTGGGGGGTAGATGTAGTTCTTTACTTGGCCATTGTTATCTGCGTTGCCTTGAAATGTCCTTTTGttcataatcatcatcatctgtgtACTTTGTCCATCTCGTGCCATCTTCGCTGTACTCCAGAGAATACGATGTCACAAACATTTCATTGCCCAATGATTTGGCCCCCTGTGTTATAATTCCAGTTATCTTCTTTATATCCTTGAGTTCCACCTGGATCCATGGCTGAAGGTCATTGTTCTGGCTTGCCATGCATTGACGGTCCCATATTTATTTAAGCGTGCATACCAAGGATGCCACTGGCCGGAGTACCAACTGGAGGCCACAGAACTGGCAGTGATTTGAGCATCTTTAATGAGGCCACTTTCCATTCCCAATGGCACAGAGCAACCTGCATCAAGCTCACAACCATAGTACTCCAAACGGACTGTTGGGTAGTTGTAAGAATGTAAAGGATAAAGCCTCACATATCGACCAATCAGaggtgggaaaaaaatattctccTTCATGTCATAAGCTTCGCTGTTTCCTTCAAAAGTCTG
>TU104950
attgaattaaagcatttatatgcagtttttaaaaattctgcatttatttaatatatttaattacagcacattaaaaatggattaaattcatATTGTCATATGAAAGCACAGTGTTTATTCAAAATCACAACCAAGCAGCTCAATCCTCATAGTGATGGACTTCTGCCATTGTTTTGGAATAATCCGGATGAATTTGGAAAATATTGGGGGGTAGATGTAGTTCTTTACTTGGCCATTGTTATCTGCGTTGCCTTGAAATGTCCTTTTGttcataatcatcatcatctgtgtACTTTGTCCATCTCGTGCCATCTTCGCTGTACTCCAGAGAATACGATGTCACAAACATTTCATTGCCCAATGATTTGGCCCCCTGTGTTATAATTCCAGTTATCTTCTTTATATCCTTGAGTTCCACCTGGATCCATGGCTGAAGGTCATTGTTGGCTTGCCATGCATTGACGGTCCCATATTTATTTAAGCGTGCATACCAAGGATGCCACTGGCCGGAGTACCAACTGGAGGCCACAGAACTGGCAGTGATTTGAGCATCTTTAATGAGGCCACTTTCCATTCCCAATGGCACAGAGCAACCTGCCAAAAAAATGAGAAGGTTTCATACAATTAAGATGAAGTTTACTGTGTCTTATAAGACAgtatgaaaaaaactaaaccatcATACCATCAAGCTCACAACCATAGTACTCCAAACGGACTGTTGGGTAGTTGTAAGAATGTAAAGGATAAAGCCTCACATATCGACCAATCAGaggtgggaaaaaaatattctccTTCATGTCATAAGCTTCGCTGTTTCCTTCAAAAGTCTG

Function

symbol description
f5 Predicted to enable copper ion binding activity. Acts upstream of or within hemostasis and response to bacterium. Is expressed in liver. Human ortholog(s) of this gene implicated in several diseases, including artery disease (multiple); end stage renal disease; factor V deficiency; liver disease (multiple); and non-arteritic anterior ischemic optic neuropathy. Orthologous to human F5 (coagulation factor V).

NR:

description
PREDICTED: venom prothrombin activator omicarin-C non-catalytic subunit-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU104949 False 747 lncRNA 0.39 4 16712819 16713846
TU104950 True 830 lncRNA 0.38 3 16712819 16713846

Neighbor

gene id symbol gene type direction distance location
slc35a5 LOC107748197,LOC107565955,LOC107673679,LOC107756781,LOC107695476 coding downstream 14180 16694754 ~ 16698639 (-)
dipk2b si:ch73-147f11.1,LOC107756741,LOC107695496,LOC107595885 coding downstream 128758 16579731 ~ 16584061 (-)
fundc1 fundc1,LOC107673665,LOC107748200,LOC107565940,LOC107695457,LOC107595886,LOC107756742 coding downstream 172168 16538368 ~ 16540651 (-)
efhc2 efhc2,LOC107673658,LOC107756743 coding downstream 174744 16526525 ~ 16538075 (-)
LOC122351145 ndp,LOC107748154,LOC107756747,LOC107695497,LOC107595887,LOC107565935 coding downstream 197375 16509560 ~ 16515444 (-)
LOC122351201 nxpe3,LOC107748146,LOC107673677,LOC107597504,LOC107695470,LOC107756776,LOC107595812 coding upstream 38157 16752003 ~ 16760172 (-)
LOC122352097 me3,LOC107748144,LOC107595810,LOC107695468,LOC107756775,LOC108426042,LOC102313335 coding upstream 48027 16761873 ~ 16767185 (-)
grtp1b grtp1b,LOC107748194,LOC107695480,LOC107673704 coding upstream 184817 16898663 ~ 16902174 (-)
ppp2r3b ppp2r3b,LOC107673721,LOC108426065,LOC107748139,LOC107695472,LOC108266308 coding upstream 224438 16938284 ~ 16954349 (-)
LOC122352140 NA coding upstream 403171 17117017 ~ 17131427 (-)
LOC122351188 NA non-coding downstream 81399 16605367 ~ 16631420 (-)
G70956 NA non-coding downstream 99395 16613117 ~ 16613424 (-)
G70955 NA non-coding downstream 102258 16610270 ~ 16610561 (-)
G70894 NA non-coding downstream 592500 16118282 ~ 16120319 (-)
LOC122352066 NA non-coding downstream 758843 15948113 ~ 15953976 (-)
G70966 gpr161,LOC107695469,LOC107756778,LOC107595811 non-coding upstream 1676 16715522 ~ 16717084 (-)
G70965 NA non-coding upstream 5669 16719515 ~ 16720573 (-)
G70979 NA non-coding upstream 37189 16751035 ~ 16751938 (-)
G70991 NA non-coding upstream 113212 16827058 ~ 16829659 (-)
G71005 NA non-coding upstream 151432 16865278 ~ 16865589 (-)
G70663 plcl1,LOC107731752,LOC107569711,LOC107690606,LOC107659890,LOC107595846,LOC107719808 other downstream 940955 15771421 ~ 15771864 (-)
tmtc4 tmtc4,LOC107748611,LOC107569561,LOC107681320,LOC107600375,LOC107694590 other downstream 1313382 15389218 ~ 15399437 (-)
G70549 NA other downstream 1406844 15303103 ~ 15305975 (-)
LOC122351495 NA other downstream 2340145 14359646 ~ 14372674 (-)
G70317 NA other downstream 2459043 14196479 ~ 14253776 (-)
dcaf6 LOC107673675,LOC107695452,LOC107748145,LOC107595867 other upstream 6958 16720804 ~ 16746222 (-)
G70986 pou2f1b,LOC107748141 other upstream 103294 16817140 ~ 16823775 (-)
cd247l cd247l,LOC107595825,LOC107673686,LOC107756738,LOC107597501,LOC107748195,LOC107695491 other upstream 172907 16886753 ~ 16889547 (-)
G71118 erbb4,LOC107660610,LOC107721020,LOC107741926,LOC103360983,LOC106519748,LOC103461563 other upstream 522026 17235872 ~ 17255491 (-)
ncam2 ncam2,LOC107756756,LOC108426076,LOC107595857,LOC107673712,LOC107748174 other upstream 650341 17364187 ~ 17521560 (-)

Expression


Co-expression Network