G70981 (nxpe3,LOC107597504,LOC107748146,LOC107673677,LOC107695470,LOC107756776,LOC107595812)


Basic Information

Item Value
gene id G70981
gene name nxpe3,LOC107597504,LOC107748146,LOC107673677,LOC107695470,LOC107756776,LOC107595812
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 16866492 ~ 16867522 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU104975
CTAAATtaacagttcatccaaaaaatctATCATCATTTAATCCTTGGTGTCATTCTATCCCAGTATGACTTTCACTCTCCTGTAGAACACCAGAgaaaatcacttaaaaaaatcttgtggtttttttttttgttaagtaatacaggtttggaacaaagcgagggtgagtaagtgatgactgaatttctgaatgaattatACATGCTCAAATCCCTGACTGGAGTAAAAGCGGTTACGTTTAATTTTCACCTGTTAACTATGAAAATATGCTGAAATGATTTGAGaatcattttagaaataaatagcaatatCTCATACATTTGTTGCCACTGGACTTGGGGAAAAAGCGCATTACTGAAATCTAAATTTCATTCAAGATTAAGAGGTCTGCCACAGTCCAACGTAAAACCAATCACAATAAGTgctccatttttaaaaatgttttatggaagAATTATCTATTCTGTtgagttacatttttaacaagaTTCTGCATACCTCGGGATAGTGCCATAAAAGTAATAGGGCTACATTAACTGTTAtggtgcttttgcattttaacatgGGCAGCAAAATCATACTGAACATTTGCAAGCCAAACAAGATAGCAAATAGCAGCTGAATATATAGCAAAAAAGCTGATCCCAAAGACAGAGGTGTGGAAGATTATTGCTAGGTCGCACCAGTTCCTTAAGAAGTTTAGCCTcgccttttctttcttctcactGGGCAGATGTGCGATAGGATGAAGTTAACCATGTTTGATATAATGTCAGGTGGAGGGTGTAGCTGATGGGGGTGATGGTGGGCGAGTGTCATCTCCCAAGCATCCACCATCTGGACGTTCAGACCTTTAAACATGGCTCGGAGAACTGCGTCAAGCTGTTGGGAGAACCAGTCGCTGTTAAACAGGCTGGACTCGGGGTCCAGTTTCTGGAGGTTGGCTGTGCGGATCAGCACCAAAGTCGCCGGTTCGCGGTTCAGTAGTCGAATCACCGCCCTGCGGATGTGGCGCAGGCGGCGTATGTACA

Function

symbol description
nxpe3 Predicted to be located in extracellular region. Orthologous to human NXPE3 (neurexophilin and PC-esterase domain family member 3).

NR:

description
PREDICTED: NXPE family member 3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU104975 True 1031 lncRNA 0.41 1 16866492 16867522

Neighbor

gene id symbol gene type direction distance location
LOC122352097 me3,LOC107748144,LOC107595810,LOC107695468,LOC107756775,LOC108426042,LOC102313335 coding downstream 99307 16761873 ~ 16767185 (-)
LOC122351201 nxpe3,LOC107748146,LOC107673677,LOC107597504,LOC107695470,LOC107756776,LOC107595812 coding downstream 106320 16752003 ~ 16760172 (-)
slc35a5 LOC107748197,LOC107565955,LOC107673679,LOC107756781,LOC107695476 coding downstream 167853 16694754 ~ 16698639 (-)
dipk2b si:ch73-147f11.1,LOC107756741,LOC107695496,LOC107595885 coding downstream 282431 16579731 ~ 16584061 (-)
fundc1 fundc1,LOC107673665,LOC107748200,LOC107565940,LOC107695457,LOC107595886,LOC107756742 coding downstream 325841 16538368 ~ 16540651 (-)
grtp1b grtp1b,LOC107748194,LOC107695480,LOC107673704 coding upstream 31141 16898663 ~ 16902174 (-)
ppp2r3b ppp2r3b,LOC107673721,LOC108426065,LOC107748139,LOC107695472,LOC108266308 coding upstream 70762 16938284 ~ 16954349 (-)
LOC122352140 NA coding upstream 249495 17117017 ~ 17131427 (-)
slc25a6 slc25a6,LOC107597494,LOC108426068,LOC107595824,LOC107695486,LOC107756767,LOC108266970 coding upstream 264948 17132470 ~ 17136795 (-)
asmtl asmtl,LOC107597490,LOC107673687 coding upstream 269619 17137141 ~ 17143357 (-)
G71006 NA non-coding downstream 70 16866178 ~ 16866422 (-)
G71005 NA non-coding downstream 903 16865278 ~ 16865589 (-)
G70991 NA non-coding downstream 36833 16827058 ~ 16829659 (-)
G70979 NA non-coding downstream 114554 16751035 ~ 16751938 (-)
G70965 NA non-coding downstream 145919 16719515 ~ 16720573 (-)
G71035 NA non-coding upstream 49702 16917224 ~ 16919314 (-)
G71117 NA non-coding upstream 345354 17212876 ~ 17297150 (-)
G71131 NA non-coding upstream 471598 17339120 ~ 17339530 (-)
G71134 NA non-coding upstream 473023 17340545 ~ 17340915 (-)
LOC122352115 NA non-coding upstream 476194 17343716 ~ 17351712 (-)
G70986 pou2f1b,LOC107748141 other downstream 42717 16817140 ~ 16823775 (-)
dcaf6 LOC107673675,LOC107695452,LOC107748145,LOC107595867 other downstream 120270 16720804 ~ 16746222 (-)
G70663 plcl1,LOC107731752,LOC107569711,LOC107690606,LOC107659890,LOC107595846,LOC107719808 other downstream 1094628 15771421 ~ 15771864 (-)
tmtc4 tmtc4,LOC107748611,LOC107569561,LOC107681320,LOC107600375,LOC107694590 other downstream 1467055 15389218 ~ 15399437 (-)
G70549 NA other downstream 1560517 15303103 ~ 15305975 (-)
cd247l cd247l,LOC107595825,LOC107673686,LOC107756738,LOC107597501,LOC107748195,LOC107695491 other upstream 19231 16886753 ~ 16889547 (-)
G71118 erbb4,LOC107660610,LOC107721020,LOC107741926,LOC103360983,LOC106519748,LOC103461563 other upstream 368350 17235872 ~ 17255491 (-)
ncam2 ncam2,LOC107756756,LOC108426076,LOC107595857,LOC107673712,LOC107748174 other upstream 496665 17364187 ~ 17521560 (-)
sema5ba sema5ba,sema5b,LOC107597557,LOC107660660,LOC107596063 other upstream 1383714 18251236 ~ 18366267 (-)
LOC122352185 NA other upstream 1702233 18569755 ~ 18569882 (-)

Expression


Co-expression Network