G71089


Basic Information

Item Value
gene id G71089
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 17310985 ~ 17315810 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU105201
ttacCTCTTGGCAGTACTGAAGGATGCCCTCTTTGGTGCCGATGCAGCCTTTGGTGCCAGTTGGATCCGGCTCCCACTTGCCACTCTGGATGTTGATATGCATGTTGAGTTTCCCACAAAACATGGCCACCTGGGGCTCCGCCAACAAGCCCACCGAGTCATCCGATGGCACCTGCCTCGATGGCGAGCGACAGAGTCGTCAGCATTAGCAGCAGGAATACCGTACGGTCCATACCCATGGCCGTGTTCCCAAACGCAGCACGTCCTGATGGATAAACGTCCCGAGCGGATCAGGGTTTTCTGTGTCGATCTTCTGCTCCGTGTTCCCCTATCGTCTGTGCTCGGTTGTGCTTTGTGAGAATGCGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU105201 True 366 lncRNA 0.56 2 17310985 17315810

Neighbor

gene id symbol gene type direction distance location
LOC122351452 gabpa,LOC107756759,LOC107695462,LOC107595806,LOC107748128,LOC107597487 coding upstream 11840 17292992 ~ 17299145 (+)
LOC122351291 LOC107748130,LOC107673722,LOC107695483,LOC107595821 coding upstream 19150 17287943 ~ 17291835 (+)
LOC122352102 gabpa,LOC107695462,LOC107595806,LOC107597487,LOC107748128,LOC107756759 coding upstream 96517 17208982 ~ 17214468 (+)
tfdp1a tfdp1a,LOC107748134,LOC107597491,LOC107595816,LOC107673714,LOC107756763,LOC107695478,LOC108426071 coding upstream 122897 17178483 ~ 17188088 (+)
shox shox,LOC107748138,LOC107597497,LOC107695485,LOC107673655,LOC107595822 coding upstream 274297 17027849 ~ 17036688 (+)
si:dkey-192g7.3 NA coding downstream 4120 17319930 ~ 17323175 (+)
sona si:dkey-67c22.2,LOC107748125,LOC107673696,LOC107756753,LOC107597485,LOC107656780,LOC107569142 coding downstream 312508 17628318 ~ 17638227 (+)
rcan1a rcan1a,rcan1,LOC107673717,LOC107597484,LOC107748124,LOC107656781,LOC107756752,LOC107569144 coding downstream 322834 17638644 ~ 17647811 (+)
LOC122351635 NA coding downstream 332660 17648470 ~ 17649602 (+)
mab21l3 LOC107597583,LOC107673652,LOC107756750,LOC107656782,LOC107569145 coding downstream 336460 17652270 ~ 17656087 (+)
G71088 LOC107595805,LOC107695460,LOC107597486,LOC107748127,LOC107756757 non-coding upstream 1945 17307583 ~ 17309040 (+)
G71083 LOC107673722,LOC107748130,LOC107595821,LOC107597562,LOC107695483 non-coding upstream 18096 17206701 ~ 17292889 (+)
LOC122351293 NA non-coding upstream 18096 17291864 ~ 17292889 (+)
G71086 NA non-coding upstream 23689 17284070 ~ 17287296 (+)
G71061 slc25a6,upf3a,LOC107597494,LOC107748177,LOC108426068,LOC107595824,LOC107756767,LOC107673688,LOC107756766,LOC107597564 non-coding upstream 32564 17132471 ~ 17278421 (+)
G71126 NA non-coding downstream 7989 17323799 ~ 17324342 (+)
G71132 NA non-coding downstream 24532 17340342 ~ 17340569 (+)
G71133 NA non-coding downstream 24890 17340700 ~ 17340917 (+)
G71162 NA non-coding downstream 291702 17607512 ~ 17607830 (+)
G71167 NA non-coding downstream 326100 17641910 ~ 17642438 (+)
jam2b LOC107748130,LOC107673722,LOC107695483,LOC107595821,LOC107597562 other upstream 102765 17203797 ~ 17208220 (+)
si:ch211-218d20.15 LOC107748193,LOC107695487,LOC107756736,LOC107673701,LOC107597587 other upstream 391695 16916761 ~ 16919290 (+)
mpc2b mpc2,LOC107695492,LOC107673680 other upstream 561284 16745893 ~ 16749701 (+)
G70814 NA other upstream 579624 16728507 ~ 16731361 (+)
rabl3 rabl3,LOC107569739,LOC107690631,LOC107659889,LOC107595844,LOC107736356 other upstream 1409265 15899427 ~ 15901720 (+)
G71130 NA other downstream 23317 17339127 ~ 17339622 (+)
lrp1bb lrp1b,LOC107661145,LOC107660661,LOC107746259,LOC107714450 other downstream 420196 17736006 ~ 17964244 (+)
clasp1a clasp1a,LOC107741904,LOC107555920,LOC107660633,LOC107673735,LOC107714287 other downstream 1234126 18549936 ~ 18610928 (+)
tfcp2l1 tfcp2l1,LOC107673739,LOC107714264,LOC107596086 other downstream 1296185 18611995 ~ 18619387 (+)
plcd4b plcd4b,LOC107741909,LOC107673750,LOC107714237,LOC107660629,LOC107596071 other downstream 1319296 18635106 ~ 18642486 (+)

Expression


Co-expression Network