G71118 (erbb4,LOC107660610,LOC107721020,LOC107741926,LOC103360983,LOC106519748,LOC103461563)


Basic Information

Item Value
gene id G71118
gene name erbb4,LOC107660610,LOC107721020,LOC107741926,LOC103360983,LOC106519748,LOC103461563
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 17235872 ~ 17255491 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU105258
TCTGAAGAGAGTAATGGCATGAGCCTTGCGTCGagatcctgtcaaagcactatACAGAGAATTTCTCGCACCTGAACTTTGAGACCCTTTCCTGAGGActattttaccatttaaacGGGACGTGTTATTACCTTACATACTCTGACACGCAACAGCAGCACTTGAGAAGTCACTCCACCGGCAGTTGCGTTCCTGTCTtgagacatttaaaataaaaggataTGGTGTTGGACATGTGAAATACACGGGAAACTTCAAACATGAAGCTGGCATCTTCTCTGTGTTGCCTCGGCTTTCTTCTCACTTCTGTGGCTGTCCGTTTCAGCGACTCGCAGCAAGTATGCCCTGGCACAGAGAATAAACTGAGTACTCTGTCAGACCTGGACCAGCAGTATCGGACCCTTCGTAAATACTATGAGAACTGCGAGGTGGTGATGGGTAACCTGGAGATCACCAGCATCGATCGCAGTCGTGAC

Function

symbol description
erbb4 Enables several functions, including epidermal growth factor receptor binding activity; protein homodimerization activity; and transmembrane receptor protein tyrosine kinase activity. Involved in several processes, including positive regulation of phosphorylation; positive regulation of signal transduction; and protein phosphorylation. Located in basolateral plasma membrane; mitochondrion; and nucleus. Part of receptor complex. Implicated in amyotrophic lateral sclerosis type 19; colorectal cancer; esophagus squamous cell carcinoma; hepatocellular carcinoma; and lung adenocarcinoma. Biomarker of carcinoma (multiple); ductal carcinoma in situ; reproductive organ cancer (multiple); and urinary bladder cancer.

NR:

description
PREDICTED: receptor tyrosine-protein kinase erbB-4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU105258 True 476 TUCP 0.47 2 17235872 17255491

Neighbor

gene id symbol gene type direction distance location
si:ch211-160b11.4 NA coding downstream 37481 17196411 ~ 17198391 (-)
mettl21cb zgc:172067,LOC107673723,LOC107748129,LOC107597488 coding downstream 43730 17188746 ~ 17192142 (-)
dcun1d2a dcun1d2a,LOC107597495,LOC107673709,LOC108426072,LOC103045446,LOC107756765 coding downstream 60158 17170549 ~ 17175714 (-)
cdc16 cdc16,LOC107673708,LOC107597489,LOC107748135,LOC107595809,LOC107756764,LOC107695467 coding downstream 65458 17161943 ~ 17170414 (-)
upf3a upf3a,LOC107673688,LOC107756766,LOC107597564,LOC107748176,LOC107695475 coding downstream 74335 17151898 ~ 17161537 (-)
appb appb,LOC107597486,LOC107748127,LOC107595805,LOC107756757,LOC107695460,LOC108426075 coding upstream 43754 17299245 ~ 17315818 (-)
zp2l1 NA coding upstream 304037 17559528 ~ 17574374 (-)
dnajc28 dnajc28,LOC107748188,LOC107673653,LOC107597584,LOC107756751,LOC107656783,LOC107569146 coding upstream 394484 17649975 ~ 17652121 (-)
ralba ralba,ralb,LOC107746258,LOC107597482,LOC107596059 coding upstream 772863 18028354 ~ 18038668 (-)
hspbap1 LOC107722869,LOC107661136,LOC107660643 coding upstream 941635 18197126 ~ 18205461 (-)
G71035 NA non-coding downstream 316558 16917224 ~ 16919314 (-)
G70981 nxpe3,LOC107597504,LOC107748146,LOC107673677,LOC107695470,LOC107756776,LOC107595812 non-coding downstream 368350 16866492 ~ 16867522 (-)
G71006 NA non-coding downstream 369450 16866178 ~ 16866422 (-)
G71005 NA non-coding downstream 370283 16865278 ~ 16865589 (-)
G70991 NA non-coding downstream 406213 16827058 ~ 16829659 (-)
G71131 NA non-coding upstream 83629 17339120 ~ 17339530 (-)
G71134 NA non-coding upstream 85054 17340545 ~ 17340915 (-)
LOC122352115 NA non-coding upstream 88225 17343716 ~ 17351712 (-)
G71149 NA non-coding upstream 336473 17591964 ~ 17592183 (-)
G71152 NA non-coding upstream 338222 17593713 ~ 17593933 (-)
cd247l cd247l,LOC107595825,LOC107673686,LOC107756738,LOC107597501,LOC107748195,LOC107695491 other downstream 346325 16886753 ~ 16889547 (-)
G70986 pou2f1b,LOC107748141 other downstream 412097 16817140 ~ 16823775 (-)
dcaf6 LOC107673675,LOC107695452,LOC107748145,LOC107595867 other downstream 489650 16720804 ~ 16746222 (-)
G70663 plcl1,LOC107731752,LOC107569711,LOC107690606,LOC107659890,LOC107595846,LOC107719808 other downstream 1464008 15771421 ~ 15771864 (-)
tmtc4 tmtc4,LOC107748611,LOC107569561,LOC107681320,LOC107600375,LOC107694590 other downstream 1836435 15389218 ~ 15399437 (-)
ncam2 ncam2,LOC107756756,LOC108426076,LOC107595857,LOC107673712,LOC107748174 other upstream 108696 17364187 ~ 17521560 (-)
sema5ba sema5ba,sema5b,LOC107597557,LOC107660660,LOC107596063 other upstream 995745 18251236 ~ 18366267 (-)
LOC122352185 NA other upstream 1314264 18569755 ~ 18569882 (-)
ankar ankar,LOC107728908,LOC107660654 other upstream 2464451 19719942 ~ 19731794 (-)
glsb glsb,gls,LOC107660591,LOC107728921,LOC107714384,LOC107657529,LOC107602138,LOC106531437 other upstream 2540761 19796252 ~ 19829475 (-)

Expression


Co-expression Network