G71162


Basic Information

Item Value
gene id G71162
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 17607512 ~ 17607830 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU105308
AAAGAATCTTTGGCTGAATGGTTGTTTGTGGAACTAAAAAGCACCATTATGTAAGCACCCTTTTAAAggaatgtatattaaaattgaaGTGAAATAAGAAATacgtttattttataatgactgTATCTGACAGCTTATGCTGCTGACTTGCCTCGCTGCCCTACCATTGACTTTACAGTGactaatatgcaaatatttatattatgggAATACTAATTTCTCactaaaaatcaaataaaacagacCAACCATTTCACAATTTCACAGTACCTTTTTTGTAGCTCAGCTGTCATCCATTGCACAGGATAGTGGGATATCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU105308 True 319 lncRNA 0.34 1 17607512 17607830

Neighbor

gene id symbol gene type direction distance location
si:dkey-192g7.3 NA coding upstream 284337 17319930 ~ 17323175 (+)
LOC122351452 gabpa,LOC107756759,LOC107695462,LOC107595806,LOC107748128,LOC107597487 coding upstream 308367 17292992 ~ 17299145 (+)
LOC122351291 LOC107748130,LOC107673722,LOC107695483,LOC107595821 coding upstream 315677 17287943 ~ 17291835 (+)
LOC122352102 gabpa,LOC107695462,LOC107595806,LOC107597487,LOC107748128,LOC107756759 coding upstream 393044 17208982 ~ 17214468 (+)
tfdp1a tfdp1a,LOC107748134,LOC107597491,LOC107595816,LOC107673714,LOC107756763,LOC107695478,LOC108426071 coding upstream 419424 17178483 ~ 17188088 (+)
sona si:dkey-67c22.2,LOC107748125,LOC107673696,LOC107756753,LOC107597485,LOC107656780,LOC107569142 coding downstream 20488 17628318 ~ 17638227 (+)
rcan1a rcan1a,rcan1,LOC107673717,LOC107597484,LOC107748124,LOC107656781,LOC107756752,LOC107569144 coding downstream 30814 17638644 ~ 17647811 (+)
LOC122351635 NA coding downstream 40640 17648470 ~ 17649602 (+)
mab21l3 LOC107597583,LOC107673652,LOC107756750,LOC107656782,LOC107569145 coding downstream 44440 17652270 ~ 17656087 (+)
atp1a1b atp1a1b,atp1a1,LOC107656784,LOC107756749,LOC107569141 coding downstream 54658 17662488 ~ 17672517 (+)
G71133 NA non-coding upstream 266595 17340700 ~ 17340917 (+)
G71132 NA non-coding upstream 266943 17340342 ~ 17340569 (+)
G71126 NA non-coding upstream 283170 17323799 ~ 17324342 (+)
G71089 NA non-coding upstream 291702 17310985 ~ 17315810 (+)
G71088 LOC107595805,LOC107695460,LOC107597486,LOC107748127,LOC107756757 non-coding upstream 298472 17307583 ~ 17309040 (+)
G71167 NA non-coding downstream 34080 17641910 ~ 17642438 (+)
G71221 NA non-coding downstream 420531 18028361 ~ 18030548 (+)
G71331 NA non-coding downstream 930650 18538480 ~ 18538700 (+)
G71333 NA non-coding downstream 933053 18540883 ~ 18541336 (+)
G71334 NA non-coding downstream 935944 18543774 ~ 18543998 (+)
G71130 NA other upstream 267890 17339127 ~ 17339622 (+)
jam2b LOC107748130,LOC107673722,LOC107695483,LOC107595821,LOC107597562 other upstream 399292 17203797 ~ 17208220 (+)
si:ch211-218d20.15 LOC107748193,LOC107695487,LOC107756736,LOC107673701,LOC107597587 other upstream 688222 16916761 ~ 16919290 (+)
mpc2b mpc2,LOC107695492,LOC107673680 other upstream 857811 16745893 ~ 16749701 (+)
G70814 NA other upstream 876151 16728507 ~ 16731361 (+)
lrp1bb lrp1b,LOC107661145,LOC107660661,LOC107746259,LOC107714450 other downstream 128176 17736006 ~ 17964244 (+)
clasp1a clasp1a,LOC107741904,LOC107555920,LOC107660633,LOC107673735,LOC107714287 other downstream 942106 18549936 ~ 18610928 (+)
tfcp2l1 tfcp2l1,LOC107673739,LOC107714264,LOC107596086 other downstream 1004165 18611995 ~ 18619387 (+)
plcd4b plcd4b,LOC107741909,LOC107673750,LOC107714237,LOC107660629,LOC107596071 other downstream 1027276 18635106 ~ 18642486 (+)
lmln lmln,LOC107741941,LOC107555912,LOC107673747,LOC107596075,LOC107714369,LOC107660656 other downstream 1074842 18682672 ~ 18689542 (+)

Expression


Co-expression Network