G71183


Basic Information

Item Value
gene id G71183
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 17638527 ~ 17639686 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU105343
TTAAAGGGTTTTCAATGGCAAAAACATCCACGGGAACTTTCCAGGCCACCAGTGAATCGGTCAGGTCGGTAAAATGCACGTCCACGGTGGCCTCACCGTCCTCGTTATTCGACTGCTGCATAACGTAAATATGGGAACATATGGGAGACTACTGCCCAAGTCGTAAAACAAGTTTAGCTCTTAGAGAAGCTGTGATAATCATATGTCGTGACAGGCTAAGCTATCTGTCTATTCTGTATGGAAATGTCACTGCCCTTAAACGACTCACGCTCACTTTGGGAGCCGATTTGTATATCGGCATTGACGTGTTAAATTGGTTTTAACTTTACACTAGATGCTTGTCTTTTAAGATGGGTGTTATAATAACAAGTAACGATTCAACCCTTCGTTTACGGAAAGCAAAAATCGATTCACGCAGCTCGAC
>TU105344
ATCATTAGGAAAAAGATTAGATCTTCTTATGGCCCATTAAATAGGATTACTGTGATGATTATGCGGCATATGGTCCCATGTCACAAAGCAGGTTATCTCTGTTTCCATGAGTTCATAGTCAATAGATCACAGTCCAACAGAGCATCTTTTGGACAAAGTAGAAAGACACGTTTGCAGCTGAATGTGCAGCCAATAAATCTCCGACTGCATGATGCAATgccaaaatgaattttttttttgcattcagtaaCAATTGTCAAACctagaaaataaatgatttttgtgtAGCTCAGCAAAttaaatatagacatatagaTGTATATGTTTGACAAGGAAGAGTCTAAATAGTTTTTCAGGATTAGGAAATGATTATGACACTTAAGAAAGTGTCTTCACAGTTGATCTAGGTTATTGTTTATAACCTAAAAACTAAGCgcacttctttttttgtgtgagaTGTGCTGGTACTCTGTTCTTCAACGTGTATGCTAATTTGTAAGTGACTTTCTTGCACATTcaagttttaatatatgtacGTATTAAACTTGTGAACATATCAGTCTGAGAATACACACGCACGTCAGGCCTTAATAATATTCTCCAGATGAATACGGGAGCGTGAATTCAATGTTACTCACTCTTAAAGGGTTTTCAATGGCAAAAACATCCACGGGAACTTTCCAGGCCACCAGTGAATCGGTCAGGTCGGTAAAATGCACGTCCACGGTGGCCTCACCGTCCTCGTTATTCGACTGCTGCATAACGTAAATATGGGAACATATGGGAGACTACTGCCCAAGTCGTAAAACAAGTTTAGCTCTTAGAGAAGCTGTGATAATCATATGTCGTGACAGGCTAAGCTATCTGTCTATTCTGTATGGAAATGTCACTGCCCTTAAACGACTCACGCTCACTTTGGGAGCCGATTTGTATATCGGCATTGACGTGTTAAATTGGTTTTAACTTTACACTAGATGCTTGTCTTTTAAGATGGGTGTTATAATAACAAGTAACGATTCAACCCTTCGTTTACGGAAAGCAAAAATCGATTCACGCAGCTCGAC
>TU105345
TTAAAGGGTTTTCAATGGCAAAAACATCCACGGGAACTTTCCAGGCCACCAGTGAATCGGTCAGGTCGGTAAAATGCACGTCCACGGTGGCCTCACCGTCCTCGTTATTCGACTGCTGCATAACGTAAATATGGGAACATATGGGAGACTACTGCCCAAGTCGTAAAACAAGTTTAGCTCTTAGAGAAGCTGTGATAATCATATGTCGTGACAGGCTAAGCTATCTGTCTATTCTGTATGGAAATGTCACTGCCCTTAAACGACTCACGCTCACTTTGGGAGCCGATTTGTATATCGGCATTGACGTGTTAAATTGGTTTTAACTTTACACTAGATGCTTGTCTTTTAAGATGGGTGTTATAATAACAAGTAACGATTCAACCCTTCGTTTACGGAAAGCAAAAATCGATTCACGCAGCTCGACAACTTCCCGTTTCCTTTTTTGACATACCCAGTGATTCCAGCAGGGGGCGGTAAGACACCACTCAAAAAACTGAAGTACTTTGTAACAAGCTGCgtt

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0000775 chromosome, centromeric region cellular_component
GO:0044422 obsolete organelle part cellular_component
GO:0044424 obsolete intracellular part cellular_component
GO:0044427 obsolete chromosomal part cellular_component
GO:0044446 obsolete intracellular organelle part cellular_component
GO:0098687 chromosomal region cellular_component
GO:0005622 intracellular anatomical structure cellular_component
GO:0005694 chromosome cellular_component
GO:0043226 organelle cellular_component
GO:0043228 non-membrane-bounded organelle cellular_component
GO:0043229 intracellular organelle cellular_component
GO:0043232 intracellular non-membrane-bounded organelle cellular_component

KEGG:

id description
ko03460 Fanconi anemia pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU105343 False 424 lncRNA 0.43 1 17638623 17639046
TU105344 True 1064 lncRNA 0.38 1 17638623 17639686
TU105345 False 520 lncRNA 0.43 1 17638527 17639046

Neighbor

gene id symbol gene type direction distance location
zp2l1 NA coding downstream 64153 17559528 ~ 17574374 (-)
appb appb,LOC107597486,LOC107748127,LOC107595805,LOC107756757,LOC107695460,LOC108426075 coding downstream 322709 17299245 ~ 17315818 (-)
si:ch211-160b11.4 NA coding downstream 440136 17196411 ~ 17198391 (-)
mettl21cb zgc:172067,LOC107673723,LOC107748129,LOC107597488 coding downstream 446385 17188746 ~ 17192142 (-)
dcun1d2a dcun1d2a,LOC107597495,LOC107673709,LOC108426072,LOC103045446,LOC107756765 coding downstream 462813 17170549 ~ 17175714 (-)
dnajc28 dnajc28,LOC107748188,LOC107673653,LOC107597584,LOC107756751,LOC107656783,LOC107569146 coding upstream 10289 17649975 ~ 17652121 (-)
ralba ralba,ralb,LOC107746258,LOC107597482,LOC107596059 coding upstream 388668 18028354 ~ 18038668 (-)
hspbap1 LOC107722869,LOC107661136,LOC107660643 coding upstream 557440 18197126 ~ 18205461 (-)
adcy5 adcy5,LOC107555914,LOC107661140,LOC107660638,LOC107596066,LOC107714401 coding upstream 787386 18427072 ~ 18492873 (-)
hacd2 hacd2,LOC107660639,LOC107741899,LOC107661144 coding upstream 854400 18494086 ~ 18499894 (-)
G71181 NA non-coding downstream 310 17636395 ~ 17638217 (-)
LOC122351532 NA non-coding downstream 8574 17607541 ~ 17629953 (-)
G71160 NA non-coding downstream 34904 17603365 ~ 17603623 (-)
G71152 NA non-coding downstream 44594 17593713 ~ 17593933 (-)
G71149 NA non-coding downstream 46344 17591964 ~ 17592183 (-)
G71184 NA non-coding upstream 493 17640179 ~ 17640403 (-)
G71185 NA non-coding upstream 1368 17641054 ~ 17641287 (-)
G71186 NA non-coding upstream 2517 17642203 ~ 17642438 (-)
G71187 NA non-coding upstream 3670 17643356 ~ 17643676 (-)
G71175 NA non-coding upstream 4752 17644438 ~ 17645920 (-)
ncam2 ncam2,LOC107756756,LOC108426076,LOC107595857,LOC107673712,LOC107748174 other downstream 116967 17364187 ~ 17521560 (-)
G71118 erbb4,LOC107660610,LOC107721020,LOC107741926,LOC103360983,LOC106519748,LOC103461563 other downstream 383036 17235872 ~ 17255491 (-)
cd247l cd247l,LOC107595825,LOC107673686,LOC107756738,LOC107597501,LOC107748195,LOC107695491 other downstream 748980 16886753 ~ 16889547 (-)
G70986 pou2f1b,LOC107748141 other downstream 814752 16817140 ~ 16823775 (-)
dcaf6 LOC107673675,LOC107695452,LOC107748145,LOC107595867 other downstream 892305 16720804 ~ 16746222 (-)
sema5ba sema5ba,sema5b,LOC107597557,LOC107660660,LOC107596063 other upstream 611550 18251236 ~ 18366267 (-)
LOC122352185 NA other upstream 930069 18569755 ~ 18569882 (-)
ankar ankar,LOC107728908,LOC107660654 other upstream 2080256 19719942 ~ 19731794 (-)
glsb glsb,gls,LOC107660591,LOC107728921,LOC107714384,LOC107657529,LOC107602138,LOC106531437 other upstream 2156566 19796252 ~ 19829475 (-)
nab1b nab1b,LOC107602153,LOC107660590,LOC107565022,LOC107714351,LOC107657527,LOC107728906 other upstream 2194234 19833920 ~ 19852625 (-)

Expression


Co-expression Network