XLOC_006557



Basic Information


Item Value
gene id XLOC_006557
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 19276173 ~ 19277332 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00013475
TGTGTAGTAGCAGATAAGaggtgtaatgggttttaactttctgggttttctggaaggtccagttgagggcatcaagaacacgcagatagcctaaacctgtgtcagcctggacagactgcagttctgctactccacgccaaggcttttgtatggatgtctgactactactgtgttctctaaaggttttctggaagctccagttgagggcatcaaggacatactgatggcctaaaccagtgtcagcctagacagac

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00013475 True 254 lncRNA 0.47 2 19276173 19277332

Neighbor


gene id symbol gene type direction distance location
XLOC_006556 NA coding downstream 259340 19010172 ~ 19016833 (-)
XLOC_006555 lzts2a coding downstream 412493 18801094 ~ 18863680 (-)
XLOC_006554 CR932361.2 coding downstream 560747 18715310 ~ 18715426 (-)
XLOC_006553 sfxn3 coding downstream 580884 18677428 ~ 18695289 (-)
XLOC_006552 CR932438.2 coding downstream 626491 18649492 ~ 18649682 (-)
XLOC_006558 NA coding upstream 61145 19338477 ~ 19339436 (-)
XLOC_006559 NA coding upstream 73519 19350851 ~ 19357011 (-)
XLOC_006560 rab11fip2 coding upstream 333230 19610562 ~ 19642288 (-)
XLOC_006561 fam204a coding upstream 489564 19766896 ~ 19799824 (-)
XLOC_006562 AL954359.2 coding upstream 940158 20217490 ~ 20222134 (-)
XLOC_006471 BX537274.2 misc downstream 9011268 10264741 ~ 10264905 (-)
XLOC_006338 rn7sk misc downstream 18449948 825904 ~ 826225 (-)
XLOC_006551 CR932438.1 non-coding downstream 631168 18644890 ~ 18645005 (-)
XLOC_006541 NA non-coding downstream 1582354 17686484 ~ 17693819 (-)
XLOC_006563 AL954359.1 non-coding upstream 949713 20227045 ~ 20231750 (-)
XLOC_006567 CU633804.1 non-coding upstream 1269635 20546967 ~ 20547498 (-)

Expression



Co-expression Network