G71389


Basic Information

Item Value
gene id G71389
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 18608827 ~ 18697031 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU105676
GGTATATAGGATATTGCCactcttttaaaaagaaaaaaaaaaagaaaaaaaaaagaacaaaaactgtACATTAGGAcaggaaatgaaataaatttataaatacaagAGTGTATCTGTGTCCAATGACAAAACGTAAAATCTAACATGCGTAGTGAATTATTGTATGGAATACCATTAGAGGTCAACATTTGAGGAAAAATCAAGGGACCACGTTTAACTTAATACTTGCATTGTTGATCCTCGCAGTTGGCTTTGTTCTTTCATTAACAGATTCTTTATATGAATAGCCCCAGTCTAAACCAAAATGTTGGTTCATGTTCCGAACCGGTTAAAAACCATTAGAAAGAAATGCTGCAACAAACGAAGGTACGCACACTTAGCATACCAATAAAAGCCACATGCCCCAGTATATAATACTTAAGGAAAGTAGGGTGCTTTCAAATGTCTGTCCTTAATTTCTAATATGGTCTGGTTCACAgtctgagaaaaacacacattttggtCAACTCTGTGAGACCCATTTGAGCTTTGCACTTATCCACTTCCCCACACGGgcaacatattaataataacaataataatactgtatttaCAGACTGACCAGACCGCTGACGTGGCCAAACAGCCAAACCTAAGTCAGTTGCGGCAGCACAGGATGGTTATGTCGTCAAAACATGCAGGCTTATTTGTTAACGTGCAAAAGAGTGCAACATCGTTTTACCTTAAATTTCGTAGGGGAGGGAGAAGCAATGATCGTAAGGTATGTACAAAACACTAAACGCTCAGCACTTAACATCAGATGGGGAGAAATCTCCAGATGaacaaggaaaaagaaagagttcAGAGCTTTCGGAGAACGTAACATCACCTCTAGTTCTTGAGGGTGTTCCTTAGTGTCACAGACACGTGCTGCGCAAACTTGCAGCGCCATGCTTTAGCGATGTAGTAAGAATGCCTGTGGACGCGTTTATCTTAACAGTCTGAgttctgaaaacagaaaaaggaaCGTAAGGCATAGTAGTTTGGAAATTTCCATCACAATCCTTTTGCTCCAAGAACAAAGTGGTAATCTGTTTCATGTCTGAAGATGCTCCTGGTCACGTTTCTGACTCCATTGAGTGTTTGTCAGCTTTTAAATGTCCAAGCGTGTTGTGGCTTGCACTTTTGCTCACAAAACCTTtcgcttttttttcccccccaaagATTAAAAGAAAAGCTCTACATTCAGAAGTTTCTGTAGCGAGGCCCACATTTTGAACACATAATCCATCCTATAATAAAATCAACACAATTGCTTTACATTAGCATtggaaataaacataatttcctACACTTTCAACCTTACGGGATGTGGTATTGCGGTCCCAcgaaataaaagtgaatataagaatgttttaatcctacatcttttttttgtttttggttgtcATTGTAGCCAAACCTACAAATTActaacatttttctcttttctttacatttatcaCTCGGCCAGCCAAATGATCCACTAGCATTAACTGAGATTCAAGTGATGTATTAGTTAACTCAACTGTGCCCGTTTAAAATATCCAAATAGCTCCATTAAACCTTTAACACCACTTGCAAACATGAATAagttattactaataaatgtaGTTAACGAATCACCTCTTCGGGAGATGAAGATAGCCTGTTCGCTCCAATTAAGGAAAGCTATGCCAATCATGGAAGatctgttccctatcaaaaaGCCAGCATGCAAGTTTCTCGATCCGAACCCCTTTACATTCAATGTTCCACAGATGGAAAGATGCATGAGACATTAACTAAGAGGCTTTCAGGAGTTGGacgaaaacaaaaatgtctgaTTGCAGTGAGCAACACATCTCTCTGGGAAAATCCAGCAAGACTGTGATGaagcgataataataataaaaaaaaaaaaaggatgtctGGAGGAGGCACAACTATTTTCCCAAATGCACGCGTAGGGCACTGATTAGAGCACATCCGGCTAGCTGTGAGAAGACACGTCTGAAGaactgctgctgttgctgttggTGGTCTGGGCCCTCTTAATGTACAGATTTA
>TU105682
attttaaaaaaaaaaaagaacaaaaactgtACATTAGGAcaggaaatgaaataaatttataaatacaagAGTGTATCTGTGTCCAATGACAAAACGTAAAATCTAACATGCGTAGTGAATTATTGTATGGAATACCATTAGAGGTCAACATTTGAGGAAAAATCAAGGGACCACGTTTAACTTAATACTTGCATTGTTGATCCTCGCAGTTGGCTTTGTTCTTTCATTAACAGATTCTTTATATGAATAGCCCCAGTCTAAACCAAAATGTTGGTTCATGTTCCGAACCGGTTAAAAACCATTAGAAAGAAATGCTGCAACAAACGAAGGTACGCACACTTAGCATACCAATAAAAGCCACATGCCCCAGTATATAATACTTAAGGAAAGTAGGGTGCTTTCAAATGTCTGTCCTTAATTTCTAATATGGTCTGGTTCACAgtctgagaaaaacacacattttggtCAACTCTGTGAGACCCATTTGAGCTTTGCACTTATCCACTTCCCCACACGGgcaacatattaataataacaataataatactgtatttaCAGACTGACCAGACCGCTGACGTGGCCAAACAGCCAAACCTAAGTCAGTTGCGGCAGCACAGGATGGTTATGTCGTCAAAACATGCAGGCTTATTTGTTAACGTGCAAAAGAGTGCAACATCGTTTTACCTTAAATTTCGTAGGGGAGGGAGAAGCAATGATCGTAAGGTATGTACAAAACACTAAACGCTCAGCACTTAACATCAGATGGGGAGAAATCTCCAGATGaacaaggaaaaagaaagagttcAGAGCTTTCGGAGAACGTAACATCACCTCTAGTTCTTGAGGGTGTTCCTTAGTGTCACAGACACGTGCTGCGCAAACTTGCAGCGCCATGCTTTAGCGATGTAGTAAGAATGCCTGTGGACGCGTTTATCTTAACAGTCTGAgttctgaaaacagaaaaaggaaCGTAAGGCATAGTAGTTTGGAAATTTCCATCACAATCCTTTTGCTCCAAGAACAAAGTGGTAATCTGTTTCATGTCTGAAGATGCTCCTGGTCACGTTTCTGACTCCATTGAGTGTTTGTCAGCTTTTAAATGTCCAAGCGTGTTGTGGCTTGCACTTTTGCTCACAAAACCTTtcgcttttttttcccccccaaagATTAAAAGAAAAGCTCTACATTCAGAAGTTTCTGTAGCGAGGCCCACATTTTGAACACATAATCCATCCTATAATAAAATCAACACAATTGCTTTACATTAGCATtggaaataaacataatttcctACACTTTCAACCTTACGGGATGTGGTATTGCGGTCCCAcgaaataaaagtgaatataagaatgttttaatcctacatcttttttttgtttttggttgtcATTGTAGCCAAACCTACAAATTActaacatttttctcttttctttacatttatcaCTCGGCCAGCCAAATGATCCACTAGCATTAACTGAGATTCAAGTGATGTATTAGTTAACTCAACTGTGCCCGTTTAAAATATCCAAATAGCTCCATTAAACCTTTAACACCACTTGCAAACATGAATAagttattactaataaatgtaGTTAACGAATCACCTCTTCGGGAGATGAAGATAGCCTGTTCGCTCCAATTAAGGAAAGCTATGCCAATCATGGAAGatctgttccctatcaaaaaGCCAGCATGCAAGTTTCTCGATCCGAACCCCTTTACATTCAATGTTCCACAGATGGAAAGATGCATGAGACATTAACTAAGAGGCTTTCAGGAGTTGGacgaaaacaaaaatgtctgaTTGCAGTGAGCAACACATCTCTCTGGGAAAATCCAGCAAGACTGTGATGaagcgataataataataaaaaaaaaaaaaggatgtctGGAGGAGGCACAACTATTTTCCCAAATGCACGCGTAGGGCACTGATTAGAGCACATCCGGCTAGCTGTGAGAAGACACGTCTGAAGaactgctgctgttgctgttggTGGTCTGGGCCCTCTTAATGTACAGATTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU105676 True 2067 lncRNA 0.39 2 18608827 18695465
TU105682 False 2030 lncRNA 0.39 2 18608827 18697031

Neighbor

gene id symbol gene type direction distance location
si:dkey-219c10.4 LOC107741933,LOC108266238,LOC106586425,LOC102795313,LOC101468032,LOC107673728,LOC107660664,LOC107555910 coding downstream 63676 18534652 ~ 18545151 (-)
hacd2 hacd2,LOC107660639,LOC107741899,LOC107661144 coding downstream 108933 18494086 ~ 18499894 (-)
adcy5 adcy5,LOC107555914,LOC107661140,LOC107660638,LOC107596066,LOC107714401 coding downstream 115954 18427072 ~ 18492873 (-)
hspbap1 LOC107722869,LOC107661136,LOC107660643 coding downstream 403366 18197126 ~ 18205461 (-)
ralba ralba,ralb,LOC107746258,LOC107597482,LOC107596059 coding downstream 570159 18028354 ~ 18038668 (-)
tgfbr2l si:dkey-101k6.5,LOC107660622,LOC107741917,LOC107555932,LOC107714146,LOC107673748,LOC107596078 coding upstream 12197 18709228 ~ 18720447 (-)
myl1 myl1,LOC107721018,LOC107673729,LOC107596080,LOC107660614,LOC107555938 coding upstream 188413 18885444 ~ 18890055 (-)
LOC122351886 erbb4,LOC107741926,LOC107660610,LOC107721020,LOC107662043,LOC107555909 coding upstream 283247 18980278 ~ 19249175 (-)
ikzf2 si:zfos-1425h8.1,LOC107741927,LOC107660609,LOC107662042,LOC107721023,LOC107556196,LOC107568511 coding upstream 562698 19259729 ~ 19285223 (-)
bard1 LOC107741928,LOC107660605,LOC107602130 coding upstream 849193 19546224 ~ 19568760 (-)
G71341 NA non-coding downstream 97299 18511173 ~ 18511528 (-)
G71339 NA non-coding downstream 98818 18508440 ~ 18510009 (-)
G71293 NA non-coding downstream 382040 18222314 ~ 18226787 (-)
LOC122352098 NA non-coding downstream 872908 17733203 ~ 17735919 (-)
G71194 NA non-coding downstream 916007 17665519 ~ 17692820 (-)
G71471 znf148,LOC107673743,LOC107660621 non-coding upstream 40725 18737756 ~ 18742225 (-)
LOC122351248 NA non-coding upstream 214812 18911843 ~ 18972902 (-)
LOC122351981 NA non-coding upstream 554606 19251637 ~ 19254248 (-)
LOC122351235 NA non-coding upstream 746414 19443445 ~ 19459100 (-)
G71587 NA non-coding upstream 761756 19458787 ~ 19543847 (-)
LOC122352185 NA other downstream 38945 18569755 ~ 18569882 (-)
sema5ba sema5ba,sema5b,LOC107597557,LOC107660660,LOC107596063 other downstream 242560 18251236 ~ 18366267 (-)
ncam2 ncam2,LOC107756756,LOC108426076,LOC107595857,LOC107673712,LOC107748174 other downstream 1087267 17364187 ~ 17521560 (-)
G71118 erbb4,LOC107660610,LOC107721020,LOC107741926,LOC103360983,LOC106519748,LOC103461563 other downstream 1353336 17235872 ~ 17255491 (-)
cd247l cd247l,LOC107595825,LOC107673686,LOC107756738,LOC107597501,LOC107748195,LOC107695491 other downstream 1719280 16886753 ~ 16889547 (-)
ankar ankar,LOC107728908,LOC107660654 other upstream 1022911 19719942 ~ 19731794 (-)
glsb glsb,gls,LOC107660591,LOC107728921,LOC107714384,LOC107657529,LOC107602138,LOC106531437 other upstream 1099221 19796252 ~ 19829475 (-)
nab1b nab1b,LOC107602153,LOC107660590,LOC107565022,LOC107714351,LOC107657527,LOC107728906 other upstream 1136889 19833920 ~ 19852625 (-)
mfsd6b mfsd6,mfsd6b,LOC107660588,LOC107657524,LOC107714386,LOC107728923 other upstream 1184519 19881550 ~ 19893315 (-)
G71938 nab1,LOC107565022 other upstream 1792133 20489164 ~ 20503890 (-)

Expression


Co-expression Network