G71471 (znf148,LOC107673743,LOC107660621)


Basic Information

Item Value
gene id G71471
gene name znf148,LOC107673743,LOC107660621
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 18737756 ~ 18742225 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU105832
CGCAATCAAAAACACCCAATCAGAACTTTTCCCCCATGTCTTAGGCAAGGTATTGCATTAAAGTATGTTCTATGGAAATAATTCGGCTACAATAAAATggatacatataaaaatataaccaGTGTACAAAGACAGTCAGAGGACATGCACTTCccaataaaattaaatggctAAAACTATTCAGAAGAGCTCTCTTactaaataaattcattcagtttttcacGCAAATTAAGcttgaaagaaaataatgatcCACTATCAGTAACACCAGATAAAACTTTGATGCTCGAAACACCCAGTCAATAGAGAAGGACAACAGTCATGTGTCTAAAAGGATATGacctttaacaaaaaaaaaaaaaaaaaaaatactaaaaaggaaataaagcaaaaaaaacacattaaggtCTTCCCTCAAATTACCATTTCATTTTCATCGATTTCTGGAGCATCTGTAGCAGTacttaatgattaaatatttataatgcagaTATCACATGATATTGAAACGATAAATAACTTCCTAAGCATTTTTCCTCTGAGGGTGTAAGAGATCCATACAAGGTTTAATGAAATTGTAATtcttaaaattgcatttagagGCAATTCTTAAGAGGACagtacatttgtaattttacaatCAAAATCACAAACATGATTTTGTCACAAAAGTTGTGCTAAAAGTCATCAGGGACTGTAGGAATGAGCAAACCAAAATGGCagcaaatattaaattgttttgcaCTCTCTACACTCCAAGAAACGTGCACAGCAAAATGCACAACTTAAAATATACAACCTATTtacaacatgtaaaaataaaagggaCAGTAAAGGAATGCTTAGgcacacataataataataataataataataataataataataataccataataatcaaaaacagtaaaatgtctTTGACATTCAGAACATATGGActatgaaaaaaactaaatgaggaCACACAGGACTGCTCTTGGGCCTCAATGTATGAAACAATAAGTAAATGTGTGcgtaaattgtttatatatatttaaaaaaaaaaaaattaaacaatttaaatgagaatgtttttaaaaatgacttacaAAGAAATGAGTGTACAGTTTGGCATGATACTATGAATAGAAATCATAAAGCTAAGATTAATCAAGATACAGTTTTGGGGCAAGCAGGTAAATTTCTATAAACAatatgaaaacagaaacaaagctTATAATTTACATGATTAGTTATTAAGCTAACAATAAGAGATGTGCAATTAACAaatgtgtacatatacatattagtaCAACTTTACCAtacattacactttttttttgttctatatTAATCCAATAAGTAACAGCAAGTGAATCTGATACAAAGACATATGCTAATGGATGGGGGTTTTTGAGCcgaagaaaatgcattttaaaaaaattatctcaGACCATACATTCTTAAATCATCTTTCTTGATTTCACTCAACACTGATATAGATCATATCAGATTTTTGAATGTTTACGTTATGTAGATGGAAAGTGGTAACTgaaaagtgcttaaaaaaaaaactgcccaCAAGCTGAAAGTGCTATTTAAAGGGTAATGTTTATCAGATCTTGAGTGCATCTGGAAGCTCAAGAAACCAGACcagaacaaattaaataatcttCAGAAAACCAATACaccttttttttacaatacaaagtATTGTATTTTGACAACTGTAAGTCTGAACTAAGCACTGAGGCACAATGATGACACAAAGAAGTGCATACCTGTTAGAGCTGTTGCCCTGGACAACGGCTAAAACTGCATCCCCAAATGTGGGATATGTGAAAACAAATGCTCTATAGAGGCCTTGCTCCCTATGTGCACCTATATCTGATTGACAGTCTCTAACGAAAATGTACTGATTCCCACAAAAGGAGCATGAGAATATCTGTTTTTTGATCCAATAACCTCAGgagaaatgtgcaaaaatatttcatggtTATATAATctcattatataaaattatgggCTAGGTCCATACAAATTCAGTATGACAATACCTGCAGACTGCTCTAAACAAAATGTCTTGGAGAGATTCTTTAAGGGAGCAGagaatgcattatatatatatatatatatatatatatataaacattctaACAAGTAATTAAATGCACAAAGAAgattaaatacacaaattagCTTACAATGACAAAGGTGAGaaatgttaccttttttttttttttttataaacaaaagtGACTTGCAGTATATCAATCACAAAGTGCCTTACTCAAGTCTAGGGCACTAAAGTAAGGTCCTTTCAGTACCTCTCCAGACAACAAGTtacaaaactaattaaatacaaaaactgaTTGTAATGCTAGGCTAGAGTAGTTTCTACATTATTAGGTGAGTCCAGCCTGATGTTCCAGCAAAATAACTGAATGCTAACAAGAATATAAATCAGAATTGATCTTCGTATAGTTTTCTCTGGGGGAAAGCTACGTTGACCCAATAATTTAGACTACTACAACAGCATTGTTGTAATAGCTTGAATTCTTAATTTTAGAACACACAAGCTAGCTAATTTTGCAAGCCACTGTATGTTTGTCCCAAGCACTACATGTGTAACACACAAATAATGCAATGACGCAAAGAGTAACCCATAGTCTGATAATAAAGTCTAATGCGTGCATCACTCTGCTCCATTTGATTCTCGCACATGCGTGATTGTTTGAAGATGGAAAATCATAAGTATTTGCACAGAGATCACACTGCCTTCACTGACAGAACTATAAAGTgcctttaaaatgctttcatttgttAAAAGCTCCTGTTTAGCCAAAGGTTTGGCTGCTTGTAGCATCTGGAGATGAAGTTAGTTGAGTTCTTGTTTCACTAACAAGAGAGAACTCTGGGAAGTCCGTTCCTCCATGACCTCTCAGACTAACTTGTCCACTGGCAATGCTAAACTGTGAGGATATTCCAGATCGTGAGCTTGGGAATTGAGATCGAAAGTTCTGGTCAAAGGTAGCAATCTGAAATGTTTGACTAATGCTTTGCGCATCTGATTTTTTGGGAGAGGTCACTTGGTCGAGAAATCCTCTGTTGGCGAAACTGAAGAAGGGTTTGTCTCATCACCTGAAAAGGAGAAGGAGTGCTGGGAATCTACTAAAAGGCTAAAGTTAGGCTTCTCCAAGGTGGATCTCAATGGTGAGTTCATGCTCGGTCTGAACCGGGATGGGGATGTGAACTGCTTCTCCGTAGAAAACAAAGGCTGGCCAGCGAGACTGGCGCTGTCATTTACAAACGTAAGACTCTGGTTGTTCAGGTAGGTGTCATTCTGACTGGTCCTTTCCAATGCTTGCTGGAGAAACTTGGAGTACTCCTGTAGAAGGCTGGCCTTCTCGGCCGGGGGTGCTTGCGAGCTGGTTCCCAAAGTTTCGGTAGGACTGCTCTCATCGGAAGAGTTGATAGAGATACTGGATGTGACCTCGGTGTCTGCCACACTGAAGGAAATCTCTGCTTGCCCGTTGGCCTTATTGGAATAGTGATCAAGAAGAGTCTGCAGGACCTCGTCTGGAAGGACGTTTTTCTCGTTACTGGACTTGATCTCCACGTTCAGCGTCTGAGTCTCAGAAAGGATTGTTGCAGGAACGGTCTCATCGATGACGCTCGCTACAGCTGCCTGAGTGACAGAAGGTTGCGACACGATGCTGCTCACATTGAGCGCATAGTCTCGACTAGTGTTTGCCGCTTGAAGGTATCGCTTCTTCTTGAGAAATTGCATGGCATCGTCGTAATTTGTGCTGCTCCCagttggttttgtttgtccttcCTGTAGGGCGTGAACTGACTCCATGTCAGGATTGGTCTCAACATCCAAGAGGCCTTTGTTGTCAACAATTTCAAATGTGTATCTCGTTACTTTGCTCTCTTCGAATGAGGCCAACGGTGAGAGGCTCTGGGGCTGTTCTAGGGCTTGCGGTTTCAAACCTCTTCTGCTAGCGATTTTCTTCAGTACTAGTTTTGGAGGACTGATGATTTCATCATTAGATTCCACCTCTGCAAGATGCCTGTTGCCAGGCGGGGAATCAGGGAGCTCAACGGAATAATCTGTCACAACATACTCGTCCTTGACCTTGGTGTCTACAGTGTAAAGAGGAAGACACTCACTTTTGGCCAGTTGGtcttcttctgtcttctcctcGCTATTAGCTTCGACCACTTTGTCAACATTTGGACTTGTAAGGGCAACCCGACTTTTATCAGAGGTCTTCTGACGTTTCTTCTTGGGAAGCGTGCATTCCTTGGCAGGAAAAGAGAAGCCCAAGCTCTCTGAGGTACGAAGAGGGCCATCTTTGGCAGCTGCTTTCTGCACCTTCCTGTCCTTATTTTCATGGCACATCCGTCTGTGCTTTAGT

Function

symbol description
znf148 Predicted to enable DNA-binding transcription factor activity and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within hemopoiesis. Predicted to be located in nucleus. Is expressed in anterior lateral plate mesoderm; brain; intermediate cell mass of mesoderm; and posterior lateral plate mesoderm. Orthologous to human ZNF148 (zinc finger protein 148).

NR:

description
PREDICTED: zinc finger protein 148

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU105832 True 4406 lncRNA 0.38 2 18737756 18742225

Neighbor

gene id symbol gene type direction distance location
tgfbr2l si:dkey-101k6.5,LOC107660622,LOC107741917,LOC107555932,LOC107714146,LOC107673748,LOC107596078 coding downstream 17309 18709228 ~ 18720447 (-)
znf142 LOC107741908,LOC107555924,LOC107660628,LOC107714222,LOC107596070,LOC107673749 coding downstream 88701 18642470 ~ 18649055 (-)
ccdc93 ccdc93,LOC107741907,LOC107555923,LOC107596073,LOC107714249 coding downstream 104152 18626417 ~ 18633604 (-)
si:dkey-219c10.4 LOC107741933,LOC108266238,LOC106586425,LOC102795313,LOC101468032,LOC107673728,LOC107660664,LOC107555910 coding downstream 192605 18534652 ~ 18545151 (-)
hacd2 hacd2,LOC107660639,LOC107741899,LOC107661144 coding downstream 237862 18494086 ~ 18499894 (-)
myl1 myl1,LOC107721018,LOC107673729,LOC107596080,LOC107660614,LOC107555938 coding upstream 143219 18885444 ~ 18890055 (-)
LOC122351886 erbb4,LOC107741926,LOC107660610,LOC107721020,LOC107662043,LOC107555909 coding upstream 238053 18980278 ~ 19249175 (-)
ikzf2 si:zfos-1425h8.1,LOC107741927,LOC107660609,LOC107662042,LOC107721023,LOC107556196,LOC107568511 coding upstream 517504 19259729 ~ 19285223 (-)
bard1 LOC107741928,LOC107660605,LOC107602130 coding upstream 803999 19546224 ~ 19568760 (-)
abca12 LOC107657499,LOC107714367,LOC107602131,LOC107660608,LOC107741931,LOC107565025 coding upstream 826943 19569168 ~ 19634801 (-)
G71389 NA non-coding downstream 40725 18608827 ~ 18697031 (-)
G71424 NA non-coding downstream 45667 18688498 ~ 18692089 (-)
G71400 LOC107555927,LOC107660626,LOC107741910,LOC107660658,LOC107660625,LOC107578255,LOC107714212 non-coding downstream 83005 18653627 ~ 18654751 (-)
G71341 NA non-coding downstream 226228 18511173 ~ 18511528 (-)
G71339 NA non-coding downstream 227747 18508440 ~ 18510009 (-)
LOC122351248 NA non-coding upstream 169618 18911843 ~ 18972902 (-)
LOC122351981 NA non-coding upstream 509412 19251637 ~ 19254248 (-)
LOC122351235 NA non-coding upstream 701220 19443445 ~ 19459100 (-)
G71587 NA non-coding upstream 716562 19458787 ~ 19543847 (-)
LOC122351387 NA non-coding upstream 754687 19496912 ~ 19508085 (-)
LOC122352185 NA other downstream 167874 18569755 ~ 18569882 (-)
sema5ba sema5ba,sema5b,LOC107597557,LOC107660660,LOC107596063 other downstream 371489 18251236 ~ 18366267 (-)
ncam2 ncam2,LOC107756756,LOC108426076,LOC107595857,LOC107673712,LOC107748174 other downstream 1216196 17364187 ~ 17521560 (-)
G71118 erbb4,LOC107660610,LOC107721020,LOC107741926,LOC103360983,LOC106519748,LOC103461563 other downstream 1482265 17235872 ~ 17255491 (-)
cd247l cd247l,LOC107595825,LOC107673686,LOC107756738,LOC107597501,LOC107748195,LOC107695491 other downstream 1848209 16886753 ~ 16889547 (-)
ankar ankar,LOC107728908,LOC107660654 other upstream 977717 19719942 ~ 19731794 (-)
glsb glsb,gls,LOC107660591,LOC107728921,LOC107714384,LOC107657529,LOC107602138,LOC106531437 other upstream 1054027 19796252 ~ 19829475 (-)
nab1b nab1b,LOC107602153,LOC107660590,LOC107565022,LOC107714351,LOC107657527,LOC107728906 other upstream 1091695 19833920 ~ 19852625 (-)
mfsd6b mfsd6,mfsd6b,LOC107660588,LOC107657524,LOC107714386,LOC107728923 other upstream 1139325 19881550 ~ 19893315 (-)
G71938 nab1,LOC107565022 other upstream 1746939 20489164 ~ 20503890 (-)

Expression


Co-expression Network