G71581 (LOC107741931,LOC107602131,LOC107660608,LOC107714367,LOC107657499,LOC107565025)


Basic Information

Item Value
gene id G71581
gene name LOC107741931,LOC107602131,LOC107660608,LOC107714367,LOC107657499,LOC107565025
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 19606985 ~ 19607201 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU105958
CTTTGGTACAGCTGCATCTGGAGGAGCTGGACATTCCAGTCAGCATGGTTTGTCATTTCTAGCACTGAGAGGTTGAATAGCATTGAAGTGTAATGCAACAGGACCTCTGTAAGTTGATTGCTAGCAAAGGTACTGTTCAGGATTGCCCCATAGAAAGTCTCCAGTGACTGGGTCATCATTCCTGCAGTGGCGTTTATCCATTGAGGGTTCATCGCCA

Function

NR:

description
PREDICTED: uncharacterized protein LOC107741931

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU105958 True 217 lncRNA 0.47 1 19606985 19607201

Neighbor

gene id symbol gene type direction distance location
map2 map2,LOC107673740,LOC107555937,LOC107741924,LOC107660616,LOC107596094 coding upstream 722660 18793081 ~ 18884325 (+)
kansl1l LOC107741922,LOC107660662,LOC107555936,LOC107596092 coding upstream 815619 18773760 ~ 18791366 (+)
heg1 LOC107555935,LOC107741920,LOC107660617,LOC107673741 coding upstream 835246 18760460 ~ 18771739 (+)
slc12a8 slc12a8,LOC107741923,LOC107660618,LOC107673744,LOC107714115,LOC107555904 coding upstream 846719 18742810 ~ 18760266 (+)
znf148 znf148,LOC107673743,LOC107660621 coding upstream 866929 18734419 ~ 18740056 (+)
hibch hibch,LOC107660603,LOC107714371,LOC107741945 coding downstream 35848 19643049 ~ 19666613 (+)
mstnb LOC107728928,LOC107602146,LOC107660602,LOC107657539 coding downstream 66059 19673260 ~ 19676836 (+)
osgepl1 osgepl1,LOC107660598 coding downstream 110061 19717262 ~ 19720435 (+)
zgc:136439 zgc:136439,LOC107660597,LOC107602150,LOC107728935 coding downstream 125154 19732355 ~ 19733971 (+)
slc40a1 slc40a1,LOC107660595,LOC107602151 coding downstream 134439 19741640 ~ 19748311 (+)
G71517 NA non-coding upstream 350752 19256030 ~ 19256233 (+)
G71509 NA non-coding upstream 355828 19250839 ~ 19251157 (+)
G71457 LOC107662043,LOC107555909,LOC107741926,LOC107556197,LOC107660610,LOC107721020 non-coding upstream 621174 18980313 ~ 18985811 (+)
LOC122351431 NA non-coding upstream 713016 18889923 ~ 18893969 (+)
G71442 LOC103022703,LOC103363874,LOC107673729,LOC107721018,LOC107596080,LOC107660614,LOC107555938 non-coding upstream 714933 18747911 ~ 18892052 (+)
G71583 LOC107741931,LOC107660608,LOC107602131 non-coding downstream 8493 19615694 ~ 19620476 (+)
G71586 NA non-coding downstream 27251 19634452 ~ 19634847 (+)
G71627 NA non-coding downstream 144381 19751582 ~ 19752090 (+)
G71628 NA non-coding downstream 145107 19752308 ~ 19752693 (+)
G71630 NA non-coding downstream 146029 19753230 ~ 19753756 (+)
vwc2l vwc2l,LOC107660607,LOC107657506,LOC107714362,LOC106586444 other upstream 63308 19512854 ~ 19543677 (+)
cps1 cps1,LOC107660611,LOC107741925 other upstream 675523 18896602 ~ 18931462 (+)
lmln lmln,LOC107741941,LOC107555912,LOC107673747,LOC107596075,LOC107714369,LOC107660656 other upstream 917443 18682672 ~ 18689542 (+)
plcd4b plcd4b,LOC107741909,LOC107673750,LOC107714237,LOC107660629,LOC107596071 other upstream 964499 18635106 ~ 18642486 (+)
tfcp2l1 tfcp2l1,LOC107673739,LOC107714264,LOC107596086 other upstream 987598 18611995 ~ 18619387 (+)
G71585 NA other downstream 14083 19621284 ~ 19621493 (+)
ormdl1 ormdl1,LOC107602148 other downstream 102163 19709364 ~ 19714404 (+)
si:dkey-10c21.1 NA other downstream 606194 20213395 ~ 20218120 (+)
gulp1a gulp1,gulp1a,LOC106581930,LOC107584160,LOC107717010,LOC107657514,LOC107562715,LOC107699007,LOC107714392 other downstream 741626 20348827 ~ 20362462 (+)
G71825 ttnb,LOC107657493,LOC107714355,LOC107601612,LOC107716993,LOC107698997 other downstream 817800 20425001 ~ 20750851 (+)

Expression


Co-expression Network