G71583 (LOC107741931,LOC107660608,LOC107602131)


Basic Information

Item Value
gene id G71583
gene name LOC107741931,LOC107660608,LOC107602131
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 19615694 ~ 19620476 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU105963
GTTCATTCCAATGATCAAATCCAGCAGGTTGTGAGATGTTATTTAGATAGGACAAAATGGTGTTCTTAATGGGAACCAACACTTCGGCTGCCTCTGCTGGCAAAAGGGTATGAATCACTCCCTCTACCATTTGTATAGTCTCCTGTGCGAGGGTGCTAGCTTGGGCATTGCTCACATTGGTGTTCAGGATCAGCTGAAGTGAACCACTGAAAGCACCTACAACCTTGTTAATCACATCCTGAGATAGAGCTtcagttttgtttgaaatactCTCCAAAACCACTTTTACAGCATTGATGACGGCTTCTGTGAAGTTTTCACTTGCGACACCACCATCAGTGCTAGCCACCTGTAGAGCATAGCTCACTGCCTCAGAGAACTGTTCAGCAATGACAAGGAAGGTTTTGTCTTCAGTGGATAATAGGGGGGCAACGGCTTGCAAAAGTTGGTCAAGATTCACCCCAGCTGCTGCAAGATCTACAGCGCTAACATTCCCCTTGAAGATTGCAGCAAGTGCCATAGTCAGTTGTTGGTTAATGATCCAGTTCTTGGTCAAACTGCCATCAGTTGAGCTCAGAAGGCTTTCTGTGACGTTTATTATCATTGATATGATGGGCTGCGCTGTGTTGTTTGATGACAGGGAATTGCGAAGCTCTGACATCATGTTTctaatg
>TU105968
AGTTCATTCCATTGATCAAATCCAGCAGGTTGTGAGATGTTATTCAGATAGgacaaaatggtgtttttaatgGGAACCAACACTTCGGCTGCCTCTGCTGGTAAAAGGGTATGAATCACTCCCTCTACCATCTGTATAATCTCCTGTGTGAGGGTGCTAGCTTGGACATTGGGGTTCATATTGGGGTTTAGGATCAGCTGAAGGAAGCTGTTGAAAGCATCAAGAATATTGTTAACCACATCCTGATGTAGAGCTCCAGTTTCATTAGAAAAATTCTTCAGAACCACTCTCATGGCACTGATGATGGCTTCTGAGAAGTTTTCACTTTGGACACCACCATCAGTGCTAGCAACCTGTAGAGCATAGTTTACTGCCTGAGAGAACTGGTCAACAACAACAAGGGTCTCTCTATCTTTAGGATGCAGTAGAGGAGTCAAGGCTTGGAGGAGCTGTTCAAGATCTTTTGCAGGTGTTGTAATATTTACAGAGCTAGTTTCCCATTTGAAAATTCTAGCAAGTGCCATCATCACTTGTGGGTTAGTGATCCACTTTTTTGTCAAGCTGAGGTAGGTCCTGATCTGAGCTTCAATTTCAGCAGGAATGCTAATGTTCATTGGGGAGTCTTGAGAATCATAGAACACCTGTTGTATCTCAAGATTTCCTTTAATTAATGCCAGCTCATCTTGCAGCATGGTCATGATTGTGTTGGCAACTTGTACAAGATCTTCACCTTCCAGAGGAAGCCTTAGATAGGTTAAGTTCTGGATATGATTCATTGTTAGCGTCATCATATCTGCTTCTGCACTGATGAGTGCCACCTGCATTTCAGTCATGCGTTTCAGTTGATGGAGAATCTCTGCAAACATACTGCCACTAGTTGCATTTCCAAGCTTGTTTAAATACCACAGTGTGATTTCTCCATACACCTTCTGTGCATACTGTCCCTGTACCATCAATGTGGAGTTAAATGTGTGGTATGGGTAATGTTCTCTGATTACCTTTTTCAAGAGATTTTCCAAAATGTTGAGCTCATTTGTAATATCAGTGTTGTTCCCCACACCAAAACTATTGAGGTTTTGTCTAATAGCTGACAGTGTTGTTATCAGCACCTCTTCCATCAGTGCAAATGAGTCAGACCCAGAACTGGACATGTTATTTACTTTCTGATATTCTACTGAAACAATGTTAAGCCAATTATTAAGAGTCATTTGAGCATTCTCAGCCACAGGTATTACTCCAAGCAAACCTGAAGCAGTCTGGATAAGCTGAAGGACACATTCTGCCTGTCCATTAGCAGAGGGCTTTTGCAGAGACTGTGCGGTTTGTGTGTTCATGCATTGTGGAAGTAGCATGGCCATATTCAGAGTCTGCTGTACAGATGCTGACCAGTTAGAATGGATTACTGAATTGACTTGCTCTAATTCAAAAATAGTGAGATTGGAGGATTGCAGAACTTGACTGATGTTGAACACAGGAGAAGATGCATAAGCCTGCTCAAGGAGATACTGAATCTTGCTGAAAATTTCCACTGAGGCTACTGCTGGCCGTGACATGTTCCATGGCAGAAGCAGAGCGAGAACATCAAGCACAACAGGGAGAGTCATGTTACCCTGAAGAGGTGTCATTGTGATGGTGGCATTTATGTCAAATGCAAGCATTGCTCCAAGAGCATCAAAAACATTCTGAACTTCAGCAACACAGTCCTGGCCAAGAGCTGAACAAATTTCCAGATCTTGAATGAGGGTATGAGTCCTATTTAGCCCTGCTTCTAACTGATACTGCTGCTCAGGAGGCAAGATGGCTCCAAGTTGGCTCAAAATAGCTTGAAGAACTGCAAAACTATCCTCTACATTTAGCATCTGGATGGACGAATTGTTCAAGACCTGGAGGATGTTCATGATGACTGGGTGCATGCTGGTTGTTTGGGAACCACCTGAGAGCAGGTTCTCTAGCTGCCCCAGACCAAAAGCTGCCATGATGTCATTTAACAGAGTGAGTGAGAGCTGAGTGTTAAACTCCTGTGTGGACTGAATGTTGGAGAGCAGCTGAATTTCTTTATCAGCTGTATTAATGAGGTCCATCAACAAGTCTTGAAGTGACATGTCACTACCAAGGAATTGACCTGATAGGCCACTGGTAATCACTTGTTGCAAAAGTGGCATGTAACTGTTTTGGAGGAGAGCTACTGTCCCCTGGAGAGG

Function

NR:

description
PREDICTED: uncharacterized protein LOC107741931

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU105963 False 674 lncRNA 0.45 2 19616541 19618128
TU105968 True 2201 lncRNA 0.43 2 19615694 19620476

Neighbor

gene id symbol gene type direction distance location
map2 map2,LOC107673740,LOC107555937,LOC107741924,LOC107660616,LOC107596094 coding upstream 731369 18793081 ~ 18884325 (+)
kansl1l LOC107741922,LOC107660662,LOC107555936,LOC107596092 coding upstream 824328 18773760 ~ 18791366 (+)
heg1 LOC107555935,LOC107741920,LOC107660617,LOC107673741 coding upstream 843955 18760460 ~ 18771739 (+)
slc12a8 slc12a8,LOC107741923,LOC107660618,LOC107673744,LOC107714115,LOC107555904 coding upstream 855428 18742810 ~ 18760266 (+)
znf148 znf148,LOC107673743,LOC107660621 coding upstream 875638 18734419 ~ 18740056 (+)
hibch hibch,LOC107660603,LOC107714371,LOC107741945 coding downstream 22573 19643049 ~ 19666613 (+)
mstnb LOC107728928,LOC107602146,LOC107660602,LOC107657539 coding downstream 52784 19673260 ~ 19676836 (+)
osgepl1 osgepl1,LOC107660598 coding downstream 96786 19717262 ~ 19720435 (+)
zgc:136439 zgc:136439,LOC107660597,LOC107602150,LOC107728935 coding downstream 111879 19732355 ~ 19733971 (+)
slc40a1 slc40a1,LOC107660595,LOC107602151 coding downstream 121164 19741640 ~ 19748311 (+)
G71581 LOC107741931,LOC107602131,LOC107660608,LOC107714367,LOC107657499,LOC107565025 non-coding upstream 8493 19606985 ~ 19607201 (+)
G71517 NA non-coding upstream 359461 19256030 ~ 19256233 (+)
G71509 NA non-coding upstream 364537 19250839 ~ 19251157 (+)
G71457 LOC107662043,LOC107555909,LOC107741926,LOC107556197,LOC107660610,LOC107721020 non-coding upstream 629883 18980313 ~ 18985811 (+)
LOC122351431 NA non-coding upstream 721725 18889923 ~ 18893969 (+)
G71586 NA non-coding downstream 13976 19634452 ~ 19634847 (+)
G71627 NA non-coding downstream 131106 19751582 ~ 19752090 (+)
G71628 NA non-coding downstream 131832 19752308 ~ 19752693 (+)
G71630 NA non-coding downstream 132754 19753230 ~ 19753756 (+)
G71629 NA non-coding downstream 134048 19754524 ~ 19755093 (+)
vwc2l vwc2l,LOC107660607,LOC107657506,LOC107714362,LOC106586444 other upstream 72017 19512854 ~ 19543677 (+)
cps1 cps1,LOC107660611,LOC107741925 other upstream 684232 18896602 ~ 18931462 (+)
lmln lmln,LOC107741941,LOC107555912,LOC107673747,LOC107596075,LOC107714369,LOC107660656 other upstream 926152 18682672 ~ 18689542 (+)
plcd4b plcd4b,LOC107741909,LOC107673750,LOC107714237,LOC107660629,LOC107596071 other upstream 973208 18635106 ~ 18642486 (+)
tfcp2l1 tfcp2l1,LOC107673739,LOC107714264,LOC107596086 other upstream 996307 18611995 ~ 18619387 (+)
G71585 NA other downstream 808 19621284 ~ 19621493 (+)
ormdl1 ormdl1,LOC107602148 other downstream 88888 19709364 ~ 19714404 (+)
si:dkey-10c21.1 NA other downstream 592919 20213395 ~ 20218120 (+)
gulp1a gulp1,gulp1a,LOC106581930,LOC107584160,LOC107717010,LOC107657514,LOC107562715,LOC107699007,LOC107714392 other downstream 728351 20348827 ~ 20362462 (+)
G71825 ttnb,LOC107657493,LOC107714355,LOC107601612,LOC107716993,LOC107698997 other downstream 804525 20425001 ~ 20750851 (+)

Expression


Co-expression Network